SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/68433
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2191 A_SariASG_c13825_g1_i1
1751bp
protein_sly1_homolog_isoform_X1_[Helicoverpa_armigera]
GO:0000149 F SNARE binding
GO:0000902 P cell morphogenesis
GO:0001666 P response to hypoxia
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005798 C Golgi-associated vesicle
GO:0005801 C cis-Golgi network
GO:0005886 C plasma membrane
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0006909 P phagocytosis
GO:0009636 P response to toxic substance
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0017119 C Golgi transport complex
GO:0019905 F syntaxin binding
GO:0022008 P neurogenesis
GO:0031201 C SNARE complex
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0060628 P regulation of ER to Golgi vesicle-mediated transport
FPKM:42.03 TPM:40.70
2192 A_SariASG_c13827_g1_i1
231bp
FPKM:0.00 TPM:0.00
2193 A_SariASG_c13828_g1_i1
342bp
FPKM:3.93 TPM:3.81
2194 A_SariASG_c13830_g1_i1
204bp
FPKM:0.83 TPM:0.81
2195 A_SariASG_c13831_g1_i1
245bp
craniofacial_development_protein_2-like_[Helicoverpa_armigera]
FPKM:7.44 TPM:7.20
2196 A_SariASG_c13832_g1_i1
207bp
FPKM:0.00 TPM:0.00
2197 A_SariASG_c13838_g1_i1
238bp
FPKM:0.53 TPM:0.52
2198 A_SariASG_c1383_g1_i1
235bp
putative_reverse_transcriptase_[Anopheles_gambiae]
FPKM:2.21 TPM:2.14
2199 A_SariASG_c13845_g1_i1
291bp
FPKM:1.68 TPM:1.62
2200 A_SariASG_c13846_g1_i1
206bp
FPKM:0.81 TPM:0.78
2201 A_SariASG_c13847_g1_i1
203bp
FPKM:0.84 TPM:0.82
2202 A_SariASG_c13855_g1_i1
263bp
putative_cuticle_protein_CPH41_[Danaus_plexippus_plexippus]
FPKM:2.51 TPM:2.43
2203 A_SariASG_c13863_g1_i1
212bp
FPKM:3.69 TPM:3.57
2204 A_SariASG_c13868_g1_i1
260bp
FPKM:2.15 TPM:2.08
2205 A_SariASG_c13869_g1_i1
469bp
FPKM:1.62 TPM:1.57
2206 A_SariASG_c1386_g1_i1
256bp
FPKM:2.67 TPM:2.59
2207 A_SariASG_c13870_g1_i1
404bp
FPKM:2.41 TPM:2.33
2208 A_SariASG_c13871_g1_i1
234bp
LOW_QUALITY_PROTEIN:_protein_Skeletor,_isoforms_B/C_[Helicoverpa_armigera]
FPKM:1.67 TPM:1.62
2209 A_SariASG_c13877_g1_i1
292bp
FPKM:3.33 TPM:3.23
2210 A_SariASG_c1387_g1_i1
244bp
FPKM:3.51 TPM:3.40
2211 A_SariASG_c13883_g1_i1
236bp
FPKM:1.09 TPM:1.06
2212 A_SariASG_c13884_g1_i1
335bp
FPKM:1.53 TPM:1.48
2213 A_SariASG_c13886_g1_i1
322bp
FPKM:2.47 TPM:2.39
2214 A_SariASG_c13889_g1_i1
1229bp
uncharacterized_protein_LOC110370848_[Helicoverpa_armigera]
FPKM:32.96 TPM:31.92
2215 A_SariASG_c13894_g1_i1
204bp
PREDICTED:_tubulin_alpha_chain_[Nothobranchius_furzeri]
GO:0000166 F nucleotide binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
FPKM:7.48 TPM:7.25
2216 A_SariASG_c13896_g1_i1
283bp
FPKM:1.42 TPM:1.38
2217 A_SariASG_c13897_g1_i1
245bp
FPKM:1.98 TPM:1.92
2218 A_SariASG_c13898_g1_i1
228bp
FPKM:4.79 TPM:4.64
2219 A_SariASG_c13899_g1_i1
204bp
FPKM:3.33 TPM:3.22
2220 A_SariASG_c1389_g1_i1
212bp
FPKM:0.74 TPM:0.71
previous next from show/68433

- SilkBase 1999-2023 -