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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2161 A_SariASG_c13765_g1_i1
233bp
hypothetical_protein_SCLCIDRAFT_72887,_partial_[Scleroderma_citrinum_Foug_A]
FPKM:0.00 TPM:0.00
2162 A_SariASG_c13766_g1_i1
334bp
elongation_factor_1-beta_[Mus_musculus]
GO:0003746 F translation elongation factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
FPKM:1.28 TPM:1.24
2163 A_SariASG_c13767_g1_i1
300bp
FPKM:4.73 TPM:4.58
2164 A_SariASG_c13768_g1_i1
230bp
FPKM:0.58 TPM:0.57
2165 A_SariASG_c13769_g1_i1
437bp
FPKM:3.44 TPM:3.33
2166 A_SariASG_c13770_g1_i1
283bp
FPKM:2.85 TPM:2.76
2167 A_SariASG_c13771_g1_i1
327bp
PREDICTED:_uncharacterized_protein_LOC105394297_[Plutella_xylostella]
FPKM:2.13 TPM:2.07
2168 A_SariASG_c13772_g1_i1
257bp
FPKM:0.88 TPM:0.86
2169 A_SariASG_c13774_g1_i1
299bp
PREDICTED:_proline-rich_protein_PRCC-like_[Plutella_xylostella]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
FPKM:3.17 TPM:3.07
2170 A_SariASG_c13779_g1_i1
232bp
FPKM:3.43 TPM:3.32
2171 A_SariASG_c13782_g1_i1
327bp
FPKM:1.60 TPM:1.55
2172 A_SariASG_c13785_g1_i1
219bp
terminase_[Pseudomonas_sp._PE-S1G-1]
FPKM:2.01 TPM:1.95
2173 A_SariASG_c13789_g1_i1
252bp
FPKM:0.46 TPM:0.45
2174 A_SariASG_c13789_g2_i1
376bp
FPKM:1.67 TPM:1.62
2175 A_SariASG_c13790_g1_i1
302bp
FPKM:0.62 TPM:0.60
2176 A_SariASG_c13793_g1_i1
201bp
FPKM:5.23 TPM:5.07
2177 A_SariASG_c13796_g1_i1
301bp
FPKM:0.63 TPM:0.61
2178 A_SariASG_c13797_g1_i1
230bp
FPKM:4.09 TPM:3.96
2179 A_SariASG_c13799_g1_i1
247bp
FPKM:0.97 TPM:0.94
2180 A_SariASG_c13805_g1_i1
225bp
FPKM:1.86 TPM:1.80
2181 A_SariASG_c13810_g1_i1
231bp
FPKM:3.47 TPM:3.36
2182 A_SariASG_c13811_g1_i1
221bp
FPKM:3.92 TPM:3.79
2183 A_SariASG_c13812_g1_i1
359bp
FPKM:2.03 TPM:1.97
2184 A_SariASG_c13814_g1_i1
316bp
FPKM:0.85 TPM:0.83
2185 A_SariASG_c13814_g1_i2
331bp
FPKM:0.00 TPM:0.00
2186 A_SariASG_c13815_g1_i1
398bp
Chain_A,_Nup50:importin-Alpha_Complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006606 P protein import into nucleus
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006810 P transport
GO:0008139 F nuclear localization sequence binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0042826 F histone deacetylase binding
GO:0044822 F RNA binding
FPKM:0.38 TPM:0.37
2187 A_SariASG_c13817_g1_i1
214bp
FPKM:0.00 TPM:0.00
2188 A_SariASG_c13819_g1_i1
328bp
cytoplasmic_polyadenylation_element-binding_protein_1-B_isoform_X1_[Helicoverpa_armigera]
FPKM:2.12 TPM:2.06
2189 A_SariASG_c13823_g1_i1
351bp
FPKM:1.88 TPM:1.82
2190 A_SariASG_c13824_g1_i1
210bp
FPKM:12.15 TPM:11.76
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