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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1621 A_SariASG_c12759_g1_i1
233bp
FPKM:1.69 TPM:1.64
1622 A_SariASG_c12760_g1_i1
523bp
PREDICTED:_phytanoyl-CoA_dioxygenase_domain-containing_protein_1_[Amyelois_transitella]
GO:0006631 P fatty acid metabolic process
GO:0016491 F oxidoreductase activity
GO:0031418 F L-ascorbic acid binding
GO:0046872 F metal ion binding
GO:0048244 F phytanoyl-CoA dioxygenase activity
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.76 TPM:1.71
1623 A_SariASG_c12764_g1_i1
242bp
PR_domain_zinc_finger_protein_5-like_isoform_X6_[Helicoverpa_armigera]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001701 P in utero embryonic development
GO:0001763 P morphogenesis of a branching structure
GO:0001892 P embryonic placenta development
GO:0001893 P maternal placenta development
GO:0003170 P heart valve development
GO:0003279 P cardiac septum development
GO:0003281 P ventricular septum development
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007281 P germ cell development
GO:0008168 F methyltransferase activity
GO:0009791 P post-embryonic development
GO:0010628 P positive regulation of gene expression
GO:0010629 P negative regulation of gene expression
GO:0016740 F transferase activity
GO:0030889 P negative regulation of B cell proliferation
GO:0031665 P negative regulation of lipopolysaccharide-mediated signaling pathway
GO:0032259 P methylation
GO:0035904 P aorta development
GO:0042127 P regulation of cell population proliferation
GO:0042462 P eye photoreceptor cell development
GO:0042826 F histone deacetylase binding
GO:0043565 F sequence-specific DNA binding
GO:0045165 P cell fate commitment
GO:0045579 P positive regulation of B cell differentiation
GO:0046872 F metal ion binding
GO:0048844 P artery morphogenesis
GO:0048869 P cellular developmental process
GO:0060576 P intestinal epithelial cell development
GO:0060707 P trophoblast giant cell differentiation
GO:0060976 P coronary vasculature development
GO:1990654 P sebum secreting cell proliferation
FPKM:6.14 TPM:5.95
1624 A_SariASG_c12765_g1_i1
323bp
MIT_domain-containing_protein_1_[Papilio_xuthus]
GO:0000281 P mitotic cytokinesis
GO:0000920 P septum digestion after cytokinesis
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0019904 F protein domain specific binding
GO:0030496 C midbody
GO:0031902 C late endosome membrane
GO:0032091 P negative regulation of protein binding
GO:0035091 F phosphatidylinositol binding
GO:0039702 P viral budding via host ESCRT complex
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0051301 P cell division
GO:0070062 C extracellular exosome
GO:0071985 P multivesicular body sorting pathway
FPKM:2.73 TPM:2.64
1625 A_SariASG_c12766_g1_i1
299bp
FPKM:7.93 TPM:7.68
1626 A_SariASG_c12767_g1_i1
379bp
FPKM:2.06 TPM:1.99
1627 A_SariASG_c12769_g1_i1
241bp
FPKM:2.59 TPM:2.50
1628 A_SariASG_c1276_g1_i1
244bp
unnamed_protein_product,_partial_[Mus_musculus]
GO:0000974 C Prp19 complex
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001055 F RNA polymerase II activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005665 C RNA polymerase II, core complex
GO:0005719 C euchromatin
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006353 P DNA-templated transcription, termination
GO:0006366 P transcription by RNA polymerase II
GO:0014070 P response to organic cyclic compound
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0033120 P positive regulation of RNA splicing
GO:0034587 P piRNA metabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0071453 P cellular response to oxygen levels
FPKM:1.50 TPM:1.46
1629 A_SariASG_c12770_g1_i1
371bp
FPKM:4.05 TPM:3.92
1630 A_SariASG_c12771_g1_i1
324bp
FPKM:1.36 TPM:1.31
1631 A_SariASG_c12772_g1_i1
302bp
FPKM:1.87 TPM:1.81
1632 A_SariASG_c12774_g1_i1
351bp
FPKM:2.58 TPM:2.50
1633 A_SariASG_c12775_g1_i1
260bp
FPKM:1.29 TPM:1.25
1634 A_SariASG_c12776_g1_i1
221bp
FPKM:1.96 TPM:1.90
1635 A_SariASG_c12779_g1_i1
464bp
tigger_transposable_element-derived_protein_4_[Helicoverpa_armigera]
FPKM:2.84 TPM:2.75
1636 A_SariASG_c12780_g1_i1
202bp
FPKM:6.01 TPM:5.82
1637 A_SariASG_c12781_g1_i1
583bp
PREDICTED:_attractin-like_[Papilio_machaon]
FPKM:4.12 TPM:3.99
1638 A_SariASG_c12786_g1_i1
491bp
FPKM:1.24 TPM:1.20
1639 A_SariASG_c12788_g1_i1
437bp
FPKM:9.50 TPM:9.20
1640 A_SariASG_c1278_g1_i1
439bp
FPKM:2.60 TPM:2.52
1641 A_SariASG_c12792_g1_i1
444bp
HSD48,_partial_[Homo_sapiens]
GO:0003231 P cardiac ventricle development
GO:0003677 F DNA binding
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006810 P transport
GO:0010664 P negative regulation of striated muscle cell apoptotic process
GO:0015031 P protein transport
GO:0017025 F TBP-class protein binding
GO:0043403 P skeletal muscle tissue regeneration
GO:0048633 P positive regulation of skeletal muscle tissue growth
GO:0048742 P regulation of skeletal muscle fiber development
GO:0051451 P myoblast migration
GO:0061384 P heart trabecula morphogenesis
GO:0070062 C extracellular exosome
GO:1901227 P negative regulation of transcription from RNA polymerase II promoter involved in heart development
GO:1901228 P positive regulation of transcription from RNA polymerase II promoter involved in heart development
GO:2000138 P positive regulation of cell proliferation involved in heart morphogenesis
FPKM:1.60 TPM:1.55
1642 A_SariASG_c12793_g1_i1
267bp
FPKM:1.21 TPM:1.17
1643 A_SariASG_c12796_g1_i1
433bp
Enhancer_of_yellow_2_transcription_factor_protein_[Danaus_plexippus_plexippus]
GO:0000124 C SAGA complex
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051028 P mRNA transport
GO:0070390 C transcription export complex 2
GO:0071819 C DUBm complex
FPKM:1.33 TPM:1.29
1644 A_SariASG_c1279_g1_i1
204bp
FPKM:0.00 TPM:0.00
1645 A_SariASG_c127_g1_i1
346bp
FPKM:1.44 TPM:1.40
1646 A_SariASG_c12801_g1_i1
320bp
FPKM:2.22 TPM:2.15
1647 A_SariASG_c12801_g2_i1
218bp
hypothetical_protein_ALC60_07150,_partial_[Trachymyrmex_zeteki]
FPKM:0.68 TPM:0.66
1648 A_SariASG_c12803_g1_i1
1114bp
DNA-directed_RNA_polymerases_I_and_III_subunit_RPAC1_[Papilio_machaon]
GO:0000183 P rDNA heterochromatin assembly
GO:0001054 F RNA polymerase I activity
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005666 C RNA polymerase III complex
GO:0005736 C RNA polymerase I complex
GO:0006351 P transcription, DNA-templated
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0006383 P transcription by RNA polymerase III
GO:0008150 P biological_process
GO:0034587 P piRNA metabolic process
GO:0046983 F protein dimerization activity
FPKM:30.03 TPM:29.09
1649 A_SariASG_c12805_g1_i1
231bp
FPKM:2.31 TPM:2.24
1650 A_SariASG_c12807_g1_i1
224bp
FPKM:3.14 TPM:3.04
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