SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/68433
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1591 A_SariASG_c12713_g1_i1
980bp
chromatin_modification-related_protein_MEAF6_[Helicoverpa_armigera]
GO:0000123 C histone acetyltransferase complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043968 P histone H2A acetylation
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043983 P histone H4-K12 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0044154 P histone H3-K14 acetylation
GO:0070776 C MOZ/MORF histone acetyltransferase complex
GO:1901796 P regulation of signal transduction by p53 class mediator
FPKM:52.87 TPM:51.20
1592 A_SariASG_c12714_g1_i1
235bp
Golgi-associated_plant_pathogenesis-related_protein_1_[Papilio_xuthus]
FPKM:0.00 TPM:0.00
1593 A_SariASG_c12718_g1_i1
393bp
FPKM:1.55 TPM:1.50
1594 A_SariASG_c12719_g1_i1
445bp
FPKM:1.91 TPM:1.85
1595 A_SariASG_c12720_g1_i1
307bp
FPKM:0.90 TPM:0.87
1596 A_SariASG_c12723_g1_i1
400bp
FPKM:2.45 TPM:2.37
1597 A_SariASG_c12724_g1_i1
370bp
FPKM:3.64 TPM:3.53
1598 A_SariASG_c12725_g1_i1
719bp
anaphase-promoting_complex_subunit_15B-like_[Helicoverpa_armigera]
GO:0003674 F molecular_function
GO:0005680 C anaphase-promoting complex
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0051301 P cell division
GO:0090266 P regulation of mitotic cell cycle spindle assembly checkpoint
FPKM:49.28 TPM:47.72
1599 A_SariASG_c12729_g1_i1
387bp
FPKM:2.78 TPM:2.69
1600 A_SariASG_c12731_g1_i1
482bp
uncharacterized_protein_LOC110371252_[Helicoverpa_armigera]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0044822 F RNA binding
FPKM:31.41 TPM:30.42
1601 A_SariASG_c12732_g1_i1
288bp
FPKM:2.40 TPM:2.32
1602 A_SariASG_c12733_g1_i1
957bp
RRP15-like_protein_[Helicoverpa_armigera]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:31.73 TPM:30.73
1603 A_SariASG_c12734_g1_i1
414bp
cytochrome_c_oxidase_assembly_factor_6_homolog_[Helicoverpa_armigera]
GO:0004129 F cytochrome-c oxidase activity
GO:0005507 F copper ion binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0005886 C plasma membrane
GO:0008535 P respiratory chain complex IV assembly
GO:0042774 P plasma membrane ATP synthesis coupled electron transport
GO:0044822 F RNA binding
GO:1902600 P proton transmembrane transport
FPKM:23.70 TPM:22.95
1604 A_SariASG_c12736_g1_i1
308bp
tyrosine-protein_kinase_Fer_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005543 F phospholipid binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007394 P dorsal closure, elongation of leading edge cells
GO:0007411 P axon guidance
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019898 C extrinsic component of membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
GO:0046664 P dorsal closure, amnioserosa morphology change
GO:0051017 P actin filament bundle assembly
FPKM:4.19 TPM:4.06
1605 A_SariASG_c12737_g1_i1
201bp
FPKM:0.87 TPM:0.84
1606 A_SariASG_c12737_g2_i1
316bp
FPKM:17.93 TPM:17.37
1607 A_SariASG_c12741_g1_i1
487bp
probable_39S_ribosomal_protein_L49,_mitochondrial_[Helicoverpa_armigera]
GO:0003735 F structural constituent of ribosome
GO:0003743 F translation initiation factor activity
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
FPKM:120.55 TPM:116.74
1608 A_SariASG_c12744_g1_i1
359bp
PREDICTED:_uncharacterized_protein_LOC106709840_[Papilio_machaon]
FPKM:2.48 TPM:2.40
1609 A_SariASG_c12746_g1_i1
323bp
FPKM:2.18 TPM:2.12
1610 A_SariASG_c12747_g1_i1
340bp
FPKM:0.99 TPM:0.96
1611 A_SariASG_c12748_g1_i1
1092bp
PREDICTED:_carboxy-terminal_domain_RNA_polymerase_II_polypeptide_A_small_phosphatase_1_[Amyelois_transitella]
GO:0001933 P negative regulation of protein phosphorylation
GO:0004721 F phosphoprotein phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006470 P protein dephosphorylation
GO:0008420 F RNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0045665 P negative regulation of neuron differentiation
GO:0046872 F metal ion binding
GO:0050768 P negative regulation of neurogenesis
GO:0070062 C extracellular exosome
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
FPKM:20.96 TPM:20.29
1612 A_SariASG_c12749_g1_i1
264bp
ubiquinone_biosynthesis_protein_COQ4_homolog,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006744 P ubiquinone biosynthetic process
GO:0016020 C membrane
FPKM:1.62 TPM:1.56
1613 A_SariASG_c12749_g1_i2
782bp
Uncharacterized_protein_OBRU01_22546_[Operophtera_brumata]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006744 P ubiquinone biosynthetic process
GO:0016020 C membrane
FPKM:9.71 TPM:9.41
1614 A_SariASG_c12750_g1_i1
330bp
FPKM:1.84 TPM:1.78
1615 A_SariASG_c12751_g1_i1
273bp
FPKM:3.08 TPM:2.98
1616 A_SariASG_c12752_g1_i1
340bp
FPKM:3.73 TPM:3.61
1617 A_SariASG_c12753_g1_i1
233bp
PC4_and_SFRS1_interacting_protein_1_[Mus_musculus]
GO:0000395 P mRNA 5'-splice site recognition
GO:0001105 F transcription coactivator activity
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005720 C heterochromatin
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006979 P response to oxidative stress
GO:0009408 P response to heat
GO:0033613 F DNA-binding transcription factor binding
GO:0034399 C nuclear periphery
GO:0035327 C euchromatin
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0097100 F supercoiled DNA binding
FPKM:1.69 TPM:1.64
1618 A_SariASG_c12754_g1_i1
251bp
Uncharacterized_protein_OBRU01_26129_[Operophtera_brumata]
FPKM:7.94 TPM:7.69
1619 A_SariASG_c12757_g1_i1
249bp
FPKM:46.70 TPM:45.22
1620 A_SariASG_c12758_g1_i1
298bp
PREDICTED:_uncharacterized_protein_LOC106115327_[Papilio_xuthus]
FPKM:5.11 TPM:4.95
previous next from show/68433

- SilkBase 1999-2023 -