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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
721 A_BomaMSG_c10808_g1_i1
436bp
kalirin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
FPKM:3.42 TPM:1.53
722 A_BomaMSG_c10808_g1_i2
425bp
kalirin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
FPKM:0.00 TPM:0.00
723 A_BomaMSG_c10809_g1_i1
340bp
PREDICTED:_uncharacterized_protein_LOC106709547_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:1.06 TPM:0.47
724 A_BomaMSG_c10809_g2_i1
309bp
PREDICTED:_uncharacterized_protein_LOC106709547_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
FPKM:0.84 TPM:0.38
725 A_BomaMSG_c1080_g1_i1
220bp
FPKM:4.66 TPM:2.08
726 A_BomaMSG_c10811_g1_i1
1097bp
LOW_QUALITY_PROTEIN:_tyrosine-protein_kinase_transmembrane_receptor_Ror_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005030 F neurotrophin receptor activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0007417 P central nervous system development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0038179 P neurotrophin signaling pathway
FPKM:3.27 TPM:1.46
727 A_BomaMSG_c10813_g1_i1
642bp
protein_arginine_N-methyltransferase_5_isoform_X3_[Bombyx_mori]
GO:0000387 P spliceosomal snRNP assembly
GO:0001046 F core promoter sequence-specific DNA binding
GO:0003714 F transcription corepressor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006353 P DNA-templated transcription, termination
GO:0006355 P regulation of transcription, DNA-templated
GO:0006479 P protein methylation
GO:0008168 F methyltransferase activity
GO:0008327 F methyl-CpG binding
GO:0016274 F protein-arginine N-methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018216 P peptidyl-arginine methylation
GO:0019918 P peptidyl-arginine methylation, to symmetrical-dimethyl arginine
GO:0032259 P methylation
GO:0032922 P circadian regulation of gene expression
GO:0034709 C methylosome
GO:0035243 F protein-arginine omega-N symmetric methyltransferase activity
GO:0035246 P peptidyl-arginine N-methylation
GO:0042118 P endothelial cell activation
GO:0043985 P histone H4-R3 methylation
GO:0044020 F histone methyltransferase activity (H4-R3 specific)
GO:0048511 P rhythmic process
GO:0090161 P Golgi ribbon formation
GO:1903507 P negative regulation of nucleic acid-templated transcription
FPKM:3.97 TPM:1.77
728 A_BomaMSG_c10814_g1_i1
360bp
FPKM:5.12 TPM:2.29
729 A_BomaMSG_c10815_g1_i1
361bp
FPKM:3.50 TPM:1.57
730 A_BomaMSG_c10816_g1_i1
221bp
FPKM:1.84 TPM:0.82
731 A_BomaMSG_c10817_g1_i1
225bp
uncharacterized_protein_LOC101746973_isoform_X2_[Bombyx_mori]
FPKM:0.00 TPM:0.00
732 A_BomaMSG_c10817_g1_i2
419bp
uncharacterized_protein_LOC101746973_isoform_X2_[Bombyx_mori]
FPKM:5.25 TPM:2.35
733 A_BomaMSG_c10819_g1_i1
348bp
filamin-A_isoform_X2_[Bombyx_mori]
FPKM:2.38 TPM:1.06
734 A_BomaMSG_c1081_g1_i1
230bp
PREDICTED:_testin_[Papilio_polytes]
FPKM:4.94 TPM:2.21
735 A_BomaMSG_c10820_g1_i1
271bp
dedicator_of_cytokinesis_protein_3_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007264 P small GTPase mediated signal transduction
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0030165 F PDZ domain binding
GO:0030971 F receptor tyrosine kinase binding
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
GO:0048365 F small GTPase binding
GO:0060326 P cell chemotaxis
GO:1904694 P negative regulation of vascular associated smooth muscle contraction
GO:1904754 P positive regulation of vascular associated smooth muscle cell migration
FPKM:3.32 TPM:1.48
736 A_BomaMSG_c10821_g1_i1
316bp
dnaJ_homolog_subfamily_C_member_13_isoform_X3_[Bombyx_mori]
GO:0001649 P osteoblast differentiation
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0007032 P endosome organization
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031901 C early endosome membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0070062 C extracellular exosome
GO:0071203 C WASH complex
GO:1902954 P regulation of early endosome to recycling endosome transport
GO:2000641 P regulation of early endosome to late endosome transport
FPKM:4.04 TPM:1.81
737 A_BomaMSG_c10822_g1_i1
217bp
FPKM:0.97 TPM:0.43
738 A_BomaMSG_c10823_g1_i1
230bp
FPKM:3.29 TPM:1.47
739 A_BomaMSG_c10824_g1_i1
234bp
PREDICTED:_acetyl-CoA_carboxylase_1-like_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003989 F acetyl-CoA carboxylase activity
GO:0004075 F biotin carboxylase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005829 C cytosol
GO:0006084 P acetyl-CoA metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006768 P biotin metabolic process
GO:0006853 P carnitine shuttle
GO:0008152 P metabolic process
GO:0010629 P negative regulation of gene expression
GO:0010884 P positive regulation of lipid storage
GO:0010906 P regulation of glucose metabolic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016874 F ligase activity
GO:0031325 P positive regulation of cellular metabolic process
GO:0031667 P response to nutrient levels
GO:0031999 P negative regulation of fatty acid beta-oxidation
GO:0043086 P negative regulation of catalytic activity
GO:0046322 P negative regulation of fatty acid oxidation
GO:0046872 F metal ion binding
GO:0050995 P negative regulation of lipid catabolic process
GO:0051289 P protein homotetramerization
GO:0060421 P positive regulation of heart growth
GO:0097009 P energy homeostasis
GO:2001295 P malonyl-CoA biosynthetic process
FPKM:2.36 TPM:1.05
740 A_BomaMSG_c10825_g1_i1
257bp
hypothetical_protein_RR46_01242_[Papilio_xuthus]
FPKM:2.49 TPM:1.11
741 A_BomaMSG_c10826_g1_i1
207bp
FPKM:13.43 TPM:6.00
742 A_BomaMSG_c10827_g1_i1
382bp
FPKM:2.61 TPM:1.17
743 A_BomaMSG_c10828_g1_i1
769bp
FPKM:4.02 TPM:1.80
744 A_BomaMSG_c10828_g2_i1
326bp
FPKM:1.53 TPM:0.68
745 A_BomaMSG_c10829_g1_i1
527bp
FPKM:0.96 TPM:0.43
746 A_BomaMSG_c10829_g1_i2
652bp
FPKM:1.69 TPM:0.76
747 A_BomaMSG_c10830_g1_i1
802bp
ATP-dependent_RNA_helicase_DDX42_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
FPKM:2.17 TPM:0.97
748 A_BomaMSG_c10832_g1_i1
259bp
FPKM:3.68 TPM:1.64
749 A_BomaMSG_c10833_g1_i1
260bp
FPKM:1.82 TPM:0.81
750 A_BomaMSG_c10835_g1_i1
290bp
uncharacterized_protein_LOC101741752_isoform_X2_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0016235 C aggresome
GO:0016607 C nuclear speck
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030154 P cell differentiation
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0034968 P histone lysine methylation
GO:0042803 F protein homodimerization activity
GO:0043069 P negative regulation of programmed cell death
GO:0043231 C intracellular membrane-bounded organelle
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046329 P negative regulation of JNK cascade
GO:0046872 F metal ion binding
GO:0051726 P regulation of cell cycle
GO:0071425 P hematopoietic stem cell proliferation
FPKM:0.48 TPM:0.21
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