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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
691 A_BomaMSG_c10777_g1_i1
513bp
FPKM:6.13 TPM:2.74
692 A_BomaMSG_c10780_g1_i1
1153bp
protein_CLP1_homolog_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005849 C mRNA cleavage factor complex
GO:0006397 P mRNA processing
GO:0031124 P mRNA 3'-end processing
FPKM:2.89 TPM:1.29
693 A_BomaMSG_c10781_g1_i1
504bp
myotubularin-related_protein_5_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005774 C vacuolar membrane
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0019208 F phosphatase regulator activity
GO:0019902 F phosphatase binding
GO:0035091 F phosphatidylinositol binding
GO:0042552 P myelination
GO:0042803 F protein homodimerization activity
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0051262 P protein tetramerization
FPKM:2.47 TPM:1.10
694 A_BomaMSG_c10782_g1_i1
204bp
FPKM:0.00 TPM:0.00
695 A_BomaMSG_c10782_g1_i2
212bp
FPKM:0.00 TPM:0.00
696 A_BomaMSG_c10783_g1_i1
357bp
protein_tramtrack,_beta_isoform-like_isoform_X7_[Helicoverpa_armigera]
FPKM:5.84 TPM:2.61
697 A_BomaMSG_c10783_g1_i2
410bp
protein_tramtrack,_beta_isoform-like_isoform_X7_[Helicoverpa_armigera]
FPKM:0.00 TPM:0.00
698 A_BomaMSG_c10784_g1_i1
998bp
arginine-hydroxylase_NDUFAF5,_mitochondrial-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0031314 C extrinsic component of mitochondrial inner membrane
GO:0032259 P methylation
GO:0032981 P mitochondrial respiratory chain complex I assembly
FPKM:3.81 TPM:1.70
699 A_BomaMSG_c10785_g1_i1
948bp
uncharacterized_protein_LOC101745877_isoform_X2_[Bombyx_mori]
FPKM:2.19 TPM:0.98
700 A_BomaMSG_c10787_g1_i1
258bp
amino_acid_transporter_[Danaus_plexippus_plexippus]
FPKM:9.27 TPM:4.14
701 A_BomaMSG_c1078_g1_i1
235bp
FPKM:5.44 TPM:2.43
702 A_BomaMSG_c10790_g1_i1
348bp
FPKM:2.38 TPM:1.06
703 A_BomaMSG_c10791_g1_i1
240bp
FPKM:4.42 TPM:1.98
704 A_BomaMSG_c10792_g1_i1
462bp
FPKM:8.41 TPM:3.76
705 A_BomaMSG_c10794_g1_i1
686bp
FPKM:4.52 TPM:2.02
706 A_BomaMSG_c10795_g1_i1
274bp
FPKM:2.70 TPM:1.21
707 A_BomaMSG_c10796_g1_i1
412bp
FPKM:1.80 TPM:0.80
708 A_BomaMSG_c10797_g1_i1
442bp
FPKM:0.69 TPM:0.31
709 A_BomaMSG_c10798_g1_i1
285bp
FPKM:1.99 TPM:0.89
710 A_BomaMSG_c10799_g1_i1
342bp
serine/threonine-protein_phosphatase_2A_55_kDa_regulatory_subunit_B_alpha_isoform_isoform_X1_[Bombyx_mori]
GO:0000159 C protein phosphatase type 2A complex
GO:0000278 P mitotic cell cycle
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006470 P protein dephosphorylation
GO:0007091 P metaphase/anaphase transition of mitotic cell cycle
GO:0007099 P centriole replication
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007423 P sensory organ development
GO:0007447 P imaginal disc pattern formation
GO:0008601 F protein phosphatase regulator activity
GO:0016055 P Wnt signaling pathway
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0034047 P regulation of phosphoprotein phosphatase activity
GO:0045201 P maintenance of neuroblast polarity
GO:0050821 P protein stabilization
GO:0051297 P centrosome cycle
FPKM:7.70 TPM:3.44
711 A_BomaMSG_c1079_g1_i1
269bp
mitochondrial_ubiquitin_ligase_activator_of_nfkb_1-A_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:4.50 TPM:2.01
712 A_BomaMSG_c107_g1_i1
205bp
FPKM:1.15 TPM:0.52
713 A_BomaMSG_c10800_g1_i1
289bp
drebrin-like_protein_B_[Bombyx_mori]
GO:0001786 F phosphatidylserine binding
GO:0003779 F actin binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005938 C cell cortex
GO:0016477 P cell migration
GO:0022416 P chaeta development
GO:0030424 C axon
GO:0030426 C growth cone
GO:0030864 C cortical actin cytoskeleton
GO:0031594 C neuromuscular junction
GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction
GO:0051015 F actin filament binding
GO:0061176 C type Ib terminal bouton
GO:0061177 C type Is terminal bouton
GO:0072553 P terminal button organization
FPKM:4.82 TPM:2.16
714 A_BomaMSG_c10802_g1_i1
737bp
PREDICTED:_uncharacterized_protein_LOC105380700_[Plutella_xylostella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:3.10 TPM:1.38
715 A_BomaMSG_c10803_g1_i1
235bp
FPKM:0.78 TPM:0.35
716 A_BomaMSG_c10804_g1_i1
1038bp
probable_nuclear_hormone_receptor_HR3_isoform_X4_[Helicoverpa_armigera]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0004887 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0030522 P intracellular receptor signaling pathway
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
FPKM:2.65 TPM:1.19
717 A_BomaMSG_c10805_g1_i1
326bp
uncharacterized_protein_LOC101744019_isoform_X1_[Bombyx_mori]
FPKM:4.96 TPM:2.22
718 A_BomaMSG_c10806_g1_i1
347bp
FPKM:2.09 TPM:0.94
719 A_BomaMSG_c10806_g1_i2
271bp
FPKM:3.59 TPM:1.60
720 A_BomaMSG_c10806_g1_i3
516bp
FPKM:0.81 TPM:0.36
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