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Last updated: 2022/11/18
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No. Name
Length
Chromosome No./Scaffold Id
Scaffold Length
BLAST (vs nr) Gene ontology Transcript
Level
541 A_BomaMSG_c1060_g1_i1
631bp
FPKM:4.76 TPM:2.13
542 A_BomaMSG_c10610_g1_i1
759bp
pyrroline-5-carboxylate_reductase_[Bombyx_mori]
GO:0004735 F pyrroline-5-carboxylate reductase activity
GO:0005737 C cytoplasm
GO:0006561 P proline biosynthetic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0055129 P L-proline biosynthetic process
FPKM:3.54 TPM:1.58
543 A_BomaMSG_c10611_g1_i1
441bp
FPKM:11.60 TPM:5.18
544 A_BomaMSG_c10611_g1_i2
310bp
FPKM:3.28 TPM:1.47
545 A_BomaMSG_c10612_g1_i1
616bp
ubiquitin_carboxyl-terminal_hydrolase_34-like_[Bombyx_mori]
GO:0000124 C SAGA complex
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016055 P Wnt signaling pathway
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0071108 P protein K48-linked deubiquitination
GO:0090263 P positive regulation of canonical Wnt signaling pathway
FPKM:2.74 TPM:1.23
546 A_BomaMSG_c10614_g1_i1
514bp
uncharacterized_protein_LOC101741008_[Bombyx_mori]
FPKM:5.18 TPM:2.31
547 A_BomaMSG_c10615_g1_i1
286bp
non-canonical_poly(A)_RNA_polymerase_protein_Trf4-1_[Bombyx_mori]
FPKM:3.45 TPM:1.54
548 A_BomaMSG_c10616_g1_i1
262bp
FPKM:1.19 TPM:0.53
549 A_BomaMSG_c10617_g1_i1
475bp
DnaJ_domain-containing_protein_[Bombyx_mori]
GO:0001405 C PAM complex, Tim23 associated import motor
GO:0001671 F ATPase activator activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022008 P neurogenesis
GO:0030150 P protein import into mitochondrial matrix
GO:0032781 P positive regulation of ATP-dependent activity
FPKM:10.97 TPM:4.90
550 A_BomaMSG_c10619_g1_i1
287bp
G_patch_domain-containing_protein_1_homolog_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0006397 P mRNA processing
FPKM:2.22 TPM:0.99
551 A_BomaMSG_c10619_g1_i2
486bp
G_patch_domain-containing_protein_1_homolog_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0006397 P mRNA processing
FPKM:4.50 TPM:2.01
552 A_BomaMSG_c1061_g1_i1
209bp
LOW_QUALITY_PROTEIN:_probable_C-mannosyltransferase_DPY19L1_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0005637 C nuclear inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018406 P protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan
FPKM:4.35 TPM:1.94
553 A_BomaMSG_c10620_g1_i1
882bp
uncharacterized_protein_LOC101742950_[Bombyx_mori]
FPKM:2.39 TPM:1.07
554 A_BomaMSG_c10621_g1_i1
277bp
FPKM:5.80 TPM:2.59
555 A_BomaMSG_c10622_g1_i1
272bp
FPKM:6.03 TPM:2.70
556 A_BomaMSG_c10623_g1_i1
224bp
FPKM:8.86 TPM:3.96
557 A_BomaMSG_c10624_g1_i1
224bp
FPKM:0.00 TPM:0.00
558 A_BomaMSG_c10625_g1_i1
240bp
FPKM:4.42 TPM:1.98
559 A_BomaMSG_c10627_g1_i1
342bp
FPKM:3.50 TPM:1.56
560 A_BomaMSG_c10628_g1_i1
204bp
histone_deacetylase_6_isoform_X2_[Bombyx_mori]
FPKM:0.00 TPM:0.00
561 A_BomaMSG_c10628_g1_i2
324bp
histone_deacetylase_6_isoform_X1_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000209 P protein polyubiquitination
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003779 F actin binding
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005881 C cytoplasmic microtubule
GO:0005901 C caveola
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006476 P protein deacetylation
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0006886 P intracellular protein transport
GO:0007026 P negative regulation of microtubule depolymerization
GO:0008013 F beta-catenin binding
GO:0008017 F microtubule binding
GO:0008270 F zinc ion binding
GO:0009636 P response to toxic substance
GO:0009967 P positive regulation of signal transduction
GO:0010033 P response to organic substance
GO:0010469 P regulation of signaling receptor activity
GO:0010634 P positive regulation of epithelial cell migration
GO:0010870 P obsolete positive regulation of receptor biosynthetic process
GO:0016234 C inclusion body
GO:0016235 C aggresome
GO:0016236 P macroautophagy
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0030286 C dynein complex
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031252 C cell leading edge
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0031625 F ubiquitin protein ligase binding
GO:0031647 P regulation of protein stability
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0032418 P lysosome localization
GO:0034983 P peptidyl-lysine deacetylation
GO:0035967 P cellular response to topologically incorrect protein
GO:0040029 P regulation of gene expression, epigenetic
GO:0042826 F histone deacetylase binding
GO:0042903 F tubulin deacetylase activity
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043014 F alpha-tubulin binding
GO:0043130 F ubiquitin binding
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0043204 C perikaryon
GO:0043234 C protein-containing complex
GO:0043241 P protein-containing complex disassembly
GO:0043242 P negative regulation of protein-containing complex disassembly
GO:0044297 C cell body
GO:0045598 P regulation of fat cell differentiation
GO:0045861 P negative regulation of proteolysis
GO:0046872 F metal ion binding
GO:0048156 F tau protein binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048487 F beta-tubulin binding
GO:0048668 P collateral sprouting
GO:0051646 P mitochondrion localization
GO:0051787 F misfolded protein binding
GO:0051788 P response to misfolded protein
GO:0051879 F Hsp90 protein binding
GO:0060997 P dendritic spine morphogenesis
GO:0070201 P regulation of establishment of protein localization
GO:0070301 P cellular response to hydrogen peroxide
GO:0070840 F dynein complex binding
GO:0070842 P aggresome assembly
GO:0070845 P polyubiquitinated misfolded protein transport
GO:0070846 P Hsp90 deacetylation
GO:0070848 P response to growth factor
GO:0070932 P histone H3 deacetylation
GO:0071218 P cellular response to misfolded protein
GO:0090035 P positive regulation of chaperone-mediated protein complex assembly
GO:0090042 P tubulin deacetylation
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:1901300 P positive regulation of hydrogen peroxide-mediated programmed cell death
FPKM:1.93 TPM:0.86
562 A_BomaMSG_c1062_g1_i1
366bp
suppressor_of_fused_homolog_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001843 P neural tube closure
GO:0001947 P heart looping
GO:0003281 P ventricular septum development
GO:0003714 F transcription corepressor activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005929 C cilium
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0008013 F beta-catenin binding
GO:0008134 F transcription factor binding
GO:0019901 F protein kinase binding
GO:0021513 P spinal cord dorsal/ventral patterning
GO:0021775 P smoothened signaling pathway involved in ventral spinal cord interneuron specification
GO:0021776 P smoothened signaling pathway involved in spinal cord motor neuron cell fate specification
GO:0035904 P aorta development
GO:0042994 P cytoplasmic sequestering of transcription factor
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0043588 P skin development
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0060976 P coronary vasculature development
GO:0072372 C cilium
GO:1901621 P negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:2000059 P negative regulation of ubiquitin-dependent protein catabolic process
FPKM:2.49 TPM:1.11
563 A_BomaMSG_c10630_g1_i1
224bp
FPKM:0.00 TPM:0.00
564 A_BomaMSG_c10630_g2_i1
493bp
FPKM:5.49 TPM:2.45
565 A_BomaMSG_c10631_g1_i1
734bp
glyoxylate_reductase/hydroxypyruvate_reductase_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005782 C peroxisomal matrix
GO:0005829 C cytosol
GO:0007588 P excretion
GO:0008152 P metabolic process
GO:0008465 F glycerate dehydrogenase activity
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016618 F hydroxypyruvate reductase activity
GO:0030267 F glyoxylate reductase (NADP+) activity
GO:0031406 F carboxylic acid binding
GO:0042803 F protein homodimerization activity
GO:0043648 P dicarboxylic acid metabolic process
GO:0046487 P glyoxylate metabolic process
GO:0050661 F NADP binding
GO:0051259 P protein complex oligomerization
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0070402 F NADPH binding
FPKM:2.31 TPM:1.03
566 A_BomaMSG_c10632_g1_i1
264bp
FPKM:2.93 TPM:1.31
567 A_BomaMSG_c10633_g1_i1
367bp
FPKM:0.31 TPM:0.14
568 A_BomaMSG_c10634_g1_i1
612bp
FPKM:4.37 TPM:1.95
569 A_BomaMSG_c10636_g1_i1
379bp
uncharacterized_protein_LOC101745797_[Bombyx_mori]
FPKM:1.76 TPM:0.79
570 A_BomaMSG_c10637_g1_i1
296bp
FPKM:3.68 TPM:1.64
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