No. |
Name Length
|
Chromosome No./Scaffold Id Scaffold Length |
BLAST (vs nr) |
Gene ontology |
Transcript Level |
541 |
A_BomaMSG_c1060_g1_i1
631bp |
|
|
|
FPKM:4.76 TPM:2.13 |
542 |
A_BomaMSG_c10610_g1_i1
759bp |
|
pyrroline-5-carboxylate_reductase_[Bombyx_mori] |
GO:0004735 |
F |
pyrroline-5-carboxylate reductase activity |
GO:0005737 |
C |
cytoplasm |
GO:0006561 |
P |
proline biosynthetic process |
GO:0008652 |
P |
cellular amino acid biosynthetic process |
GO:0016491 |
F |
oxidoreductase activity |
GO:0055114 |
P |
obsolete oxidation-reduction process |
GO:0055129 |
P |
L-proline biosynthetic process |
|
FPKM:3.54 TPM:1.58 |
543 |
A_BomaMSG_c10611_g1_i1
441bp |
|
|
|
FPKM:11.60 TPM:5.18 |
544 |
A_BomaMSG_c10611_g1_i2
310bp |
|
|
|
FPKM:3.28 TPM:1.47 |
545 |
A_BomaMSG_c10612_g1_i1
616bp |
|
ubiquitin_carboxyl-terminal_hydrolase_34-like_[Bombyx_mori] |
GO:0000124 |
C |
SAGA complex |
GO:0004197 |
F |
cysteine-type endopeptidase activity |
GO:0004843 |
F |
thiol-dependent deubiquitinase |
GO:0005515 |
F |
protein binding |
GO:0005829 |
C |
cytosol |
GO:0006355 |
P |
regulation of transcription, DNA-templated |
GO:0006508 |
P |
proteolysis |
GO:0006511 |
P |
ubiquitin-dependent protein catabolic process |
GO:0008233 |
F |
peptidase activity |
GO:0008234 |
F |
cysteine-type peptidase activity |
GO:0016055 |
P |
Wnt signaling pathway |
GO:0016578 |
P |
histone deubiquitination |
GO:0016579 |
P |
protein deubiquitination |
GO:0016787 |
F |
hydrolase activity |
GO:0036459 |
F |
thiol-dependent deubiquitinase |
GO:0071108 |
P |
protein K48-linked deubiquitination |
GO:0090263 |
P |
positive regulation of canonical Wnt signaling pathway |
|
FPKM:2.74 TPM:1.23 |
546 |
A_BomaMSG_c10614_g1_i1
514bp |
|
uncharacterized_protein_LOC101741008_[Bombyx_mori] |
|
FPKM:5.18 TPM:2.31 |
547 |
A_BomaMSG_c10615_g1_i1
286bp |
|
non-canonical_poly(A)_RNA_polymerase_protein_Trf4-1_[Bombyx_mori] |
|
FPKM:3.45 TPM:1.54 |
548 |
A_BomaMSG_c10616_g1_i1
262bp |
|
|
|
FPKM:1.19 TPM:0.53 |
549 |
A_BomaMSG_c10617_g1_i1
475bp |
|
DnaJ_domain-containing_protein_[Bombyx_mori] |
GO:0001405 |
C |
PAM complex, Tim23 associated import motor |
GO:0001671 |
F |
ATPase activator activity |
GO:0005739 |
C |
mitochondrion |
GO:0005743 |
C |
mitochondrial inner membrane |
GO:0005744 |
C |
TIM23 mitochondrial import inner membrane translocase complex |
GO:0006810 |
P |
transport |
GO:0015031 |
P |
protein transport |
GO:0016020 |
C |
membrane |
GO:0016021 |
C |
integral component of membrane |
GO:0022008 |
P |
neurogenesis |
GO:0030150 |
P |
protein import into mitochondrial matrix |
GO:0032781 |
P |
positive regulation of ATP-dependent activity |
|
FPKM:10.97 TPM:4.90 |
550 |
A_BomaMSG_c10619_g1_i1
287bp |
|
G_patch_domain-containing_protein_1_homolog_[Bombyx_mori] |
GO:0003676 |
F |
nucleic acid binding |
GO:0006397 |
P |
mRNA processing |
|
FPKM:2.22 TPM:0.99 |
551 |
A_BomaMSG_c10619_g1_i2
486bp |
|
G_patch_domain-containing_protein_1_homolog_[Bombyx_mori] |
GO:0003676 |
F |
nucleic acid binding |
GO:0006397 |
P |
mRNA processing |
|
FPKM:4.50 TPM:2.01 |
552 |
A_BomaMSG_c1061_g1_i1
209bp |
|
LOW_QUALITY_PROTEIN:_probable_C-mannosyltransferase_DPY19L1_[Bombyx_mori] |
GO:0000030 |
F |
mannosyltransferase activity |
GO:0005637 |
C |
nuclear inner membrane |
GO:0016020 |
C |
membrane |
GO:0016021 |
C |
integral component of membrane |
GO:0016740 |
F |
transferase activity |
GO:0016757 |
F |
glycosyltransferase activity |
GO:0018406 |
P |
protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan |
|
FPKM:4.35 TPM:1.94 |
553 |
A_BomaMSG_c10620_g1_i1
882bp |
|
uncharacterized_protein_LOC101742950_[Bombyx_mori] |
|
FPKM:2.39 TPM:1.07 |
554 |
A_BomaMSG_c10621_g1_i1
277bp |
|
|
|
FPKM:5.80 TPM:2.59 |
555 |
A_BomaMSG_c10622_g1_i1
272bp |
|
|
|
FPKM:6.03 TPM:2.70 |
556 |
A_BomaMSG_c10623_g1_i1
224bp |
|
|
|
FPKM:8.86 TPM:3.96 |
557 |
A_BomaMSG_c10624_g1_i1
224bp |
|
|
|
FPKM:0.00 TPM:0.00 |
558 |
A_BomaMSG_c10625_g1_i1
240bp |
|
|
|
FPKM:4.42 TPM:1.98 |
559 |
A_BomaMSG_c10627_g1_i1
342bp |
|
|
|
FPKM:3.50 TPM:1.56 |
560 |
A_BomaMSG_c10628_g1_i1
204bp |
|
histone_deacetylase_6_isoform_X2_[Bombyx_mori] |
|
FPKM:0.00 TPM:0.00 |
561 |
A_BomaMSG_c10628_g1_i2
324bp |
|
histone_deacetylase_6_isoform_X1_[Bombyx_mori] |
GO:0000118 |
C |
histone deacetylase complex |
GO:0000209 |
P |
protein polyubiquitination |
GO:0001047 |
F |
core promoter sequence-specific DNA binding |
GO:0003779 |
F |
actin binding |
GO:0004407 |
F |
histone deacetylase activity |
GO:0005515 |
F |
protein binding |
GO:0005634 |
C |
nucleus |
GO:0005737 |
C |
cytoplasm |
GO:0005829 |
C |
cytosol |
GO:0005874 |
C |
microtubule |
GO:0005875 |
C |
microtubule associated complex |
GO:0005881 |
C |
cytoplasmic microtubule |
GO:0005901 |
C |
caveola |
GO:0006351 |
P |
transcription, DNA-templated |
GO:0006355 |
P |
regulation of transcription, DNA-templated |
GO:0006476 |
P |
protein deacetylation |
GO:0006511 |
P |
ubiquitin-dependent protein catabolic process |
GO:0006515 |
P |
protein quality control for misfolded or incompletely synthesized proteins |
GO:0006886 |
P |
intracellular protein transport |
GO:0007026 |
P |
negative regulation of microtubule depolymerization |
GO:0008013 |
F |
beta-catenin binding |
GO:0008017 |
F |
microtubule binding |
GO:0008270 |
F |
zinc ion binding |
GO:0009636 |
P |
response to toxic substance |
GO:0009967 |
P |
positive regulation of signal transduction |
GO:0010033 |
P |
response to organic substance |
GO:0010469 |
P |
regulation of signaling receptor activity |
GO:0010634 |
P |
positive regulation of epithelial cell migration |
GO:0010870 |
P |
obsolete positive regulation of receptor biosynthetic process |
GO:0016234 |
C |
inclusion body |
GO:0016235 |
C |
aggresome |
GO:0016236 |
P |
macroautophagy |
GO:0016568 |
P |
chromatin organization |
GO:0016575 |
P |
histone deacetylation |
GO:0016787 |
F |
hydrolase activity |
GO:0030286 |
C |
dynein complex |
GO:0030424 |
C |
axon |
GO:0030425 |
C |
dendrite |
GO:0031252 |
C |
cell leading edge |
GO:0031593 |
F |
polyubiquitin modification-dependent protein binding |
GO:0031625 |
F |
ubiquitin protein ligase binding |
GO:0031647 |
P |
regulation of protein stability |
GO:0032041 |
F |
NAD-dependent histone deacetylase activity (H3-K14 specific) |
GO:0032418 |
P |
lysosome localization |
GO:0034983 |
P |
peptidyl-lysine deacetylation |
GO:0035967 |
P |
cellular response to topologically incorrect protein |
GO:0040029 |
P |
regulation of gene expression, epigenetic |
GO:0042826 |
F |
histone deacetylase binding |
GO:0042903 |
F |
tubulin deacetylase activity |
GO:0042995 |
C |
cell projection |
GO:0043005 |
C |
neuron projection |
GO:0043014 |
F |
alpha-tubulin binding |
GO:0043130 |
F |
ubiquitin binding |
GO:0043162 |
P |
ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway |
GO:0043204 |
C |
perikaryon |
GO:0043234 |
C |
protein-containing complex |
GO:0043241 |
P |
protein-containing complex disassembly |
GO:0043242 |
P |
negative regulation of protein-containing complex disassembly |
GO:0044297 |
C |
cell body |
GO:0045598 |
P |
regulation of fat cell differentiation |
GO:0045861 |
P |
negative regulation of proteolysis |
GO:0046872 |
F |
metal ion binding |
GO:0048156 |
F |
tau protein binding |
GO:0048471 |
C |
perinuclear region of cytoplasm |
GO:0048487 |
F |
beta-tubulin binding |
GO:0048668 |
P |
collateral sprouting |
GO:0051646 |
P |
mitochondrion localization |
GO:0051787 |
F |
misfolded protein binding |
GO:0051788 |
P |
response to misfolded protein |
GO:0051879 |
F |
Hsp90 protein binding |
GO:0060997 |
P |
dendritic spine morphogenesis |
GO:0070201 |
P |
regulation of establishment of protein localization |
GO:0070301 |
P |
cellular response to hydrogen peroxide |
GO:0070840 |
F |
dynein complex binding |
GO:0070842 |
P |
aggresome assembly |
GO:0070845 |
P |
polyubiquitinated misfolded protein transport |
GO:0070846 |
P |
Hsp90 deacetylation |
GO:0070848 |
P |
response to growth factor |
GO:0070932 |
P |
histone H3 deacetylation |
GO:0071218 |
P |
cellular response to misfolded protein |
GO:0090035 |
P |
positive regulation of chaperone-mediated protein complex assembly |
GO:0090042 |
P |
tubulin deacetylation |
GO:0098779 |
P |
positive regulation of mitophagy in response to mitochondrial depolarization |
GO:1901300 |
P |
positive regulation of hydrogen peroxide-mediated programmed cell death |
|
FPKM:1.93 TPM:0.86 |
562 |
A_BomaMSG_c1062_g1_i1
366bp |
|
suppressor_of_fused_homolog_[Bombyx_mori] |
GO:0000122 |
P |
negative regulation of transcription by RNA polymerase II |
GO:0001843 |
P |
neural tube closure |
GO:0001947 |
P |
heart looping |
GO:0003281 |
P |
ventricular septum development |
GO:0003714 |
F |
transcription corepressor activity |
GO:0004871 |
F |
obsolete signal transducer activity |
GO:0005515 |
F |
protein binding |
GO:0005634 |
C |
nucleus |
GO:0005654 |
C |
nucleoplasm |
GO:0005737 |
C |
cytoplasm |
GO:0005829 |
C |
cytosol |
GO:0005929 |
C |
cilium |
GO:0007275 |
P |
multicellular organism development |
GO:0007368 |
P |
determination of left/right symmetry |
GO:0008013 |
F |
beta-catenin binding |
GO:0008134 |
F |
transcription factor binding |
GO:0019901 |
F |
protein kinase binding |
GO:0021513 |
P |
spinal cord dorsal/ventral patterning |
GO:0021775 |
P |
smoothened signaling pathway involved in ventral spinal cord interneuron specification |
GO:0021776 |
P |
smoothened signaling pathway involved in spinal cord motor neuron cell fate specification |
GO:0035904 |
P |
aorta development |
GO:0042994 |
P |
cytoplasmic sequestering of transcription factor |
GO:0043433 |
P |
negative regulation of DNA-binding transcription factor activity |
GO:0043588 |
P |
skin development |
GO:0045879 |
P |
negative regulation of smoothened signaling pathway |
GO:0060976 |
P |
coronary vasculature development |
GO:0072372 |
C |
cilium |
GO:1901621 |
P |
negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning |
GO:2000059 |
P |
negative regulation of ubiquitin-dependent protein catabolic process |
|
FPKM:2.49 TPM:1.11 |
563 |
A_BomaMSG_c10630_g1_i1
224bp |
|
|
|
FPKM:0.00 TPM:0.00 |
564 |
A_BomaMSG_c10630_g2_i1
493bp |
|
|
|
FPKM:5.49 TPM:2.45 |
565 |
A_BomaMSG_c10631_g1_i1
734bp |
|
glyoxylate_reductase/hydroxypyruvate_reductase_[Bombyx_mori] |
GO:0005737 |
C |
cytoplasm |
GO:0005782 |
C |
peroxisomal matrix |
GO:0005829 |
C |
cytosol |
GO:0007588 |
P |
excretion |
GO:0008152 |
P |
metabolic process |
GO:0008465 |
F |
glycerate dehydrogenase activity |
GO:0016491 |
F |
oxidoreductase activity |
GO:0016616 |
F |
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
GO:0016618 |
F |
hydroxypyruvate reductase activity |
GO:0030267 |
F |
glyoxylate reductase (NADP+) activity |
GO:0031406 |
F |
carboxylic acid binding |
GO:0042803 |
F |
protein homodimerization activity |
GO:0043648 |
P |
dicarboxylic acid metabolic process |
GO:0046487 |
P |
glyoxylate metabolic process |
GO:0050661 |
F |
NADP binding |
GO:0051259 |
P |
protein complex oligomerization |
GO:0051287 |
F |
NAD binding |
GO:0055114 |
P |
obsolete oxidation-reduction process |
GO:0070062 |
C |
extracellular exosome |
GO:0070402 |
F |
NADPH binding |
|
FPKM:2.31 TPM:1.03 |
566 |
A_BomaMSG_c10632_g1_i1
264bp |
|
|
|
FPKM:2.93 TPM:1.31 |
567 |
A_BomaMSG_c10633_g1_i1
367bp |
|
|
|
FPKM:0.31 TPM:0.14 |
568 |
A_BomaMSG_c10634_g1_i1
612bp |
|
|
|
FPKM:4.37 TPM:1.95 |
569 |
A_BomaMSG_c10636_g1_i1
379bp |
|
uncharacterized_protein_LOC101745797_[Bombyx_mori] |
|
FPKM:1.76 TPM:0.79 |
570 |
A_BomaMSG_c10637_g1_i1
296bp |
|
|
|
FPKM:3.68 TPM:1.64 |