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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3721 A_BomaMSG_c14000_g1_i1
432bp
actin_cytoskeleton-regulatory_complex_protein_PAN1_[Bombyx_mori]
FPKM:4.06 TPM:1.81
3722 A_BomaMSG_c14001_g1_i1
653bp
FPKM:4.02 TPM:1.79
3723 A_BomaMSG_c14005_g1_i1
247bp
acidic_nucleoplasmic_DNA-binding_protein_1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
FPKM:1.85 TPM:0.83
3724 A_BomaMSG_c14005_g1_i2
339bp
acidic_nucleoplasmic_DNA-binding_protein_1_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006396 P RNA processing
GO:0033044 P regulation of chromosome organization
GO:0070063 F RNA polymerase binding
GO:0070829 P obsolete heterochromatin maintenance
FPKM:1.89 TPM:0.84
3725 A_BomaMSG_c14006_g1_i1
265bp
zinc_finger_protein_208-like_isoform_X2_[Bombyx_mori]
GO:0002437 P inflammatory response to antigenic stimulus
GO:0002829 P negative regulation of type 2 immune response
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0045629 P negative regulation of T-helper 2 cell differentiation
GO:0046872 F metal ion binding
FPKM:1.74 TPM:0.78
3726 A_BomaMSG_c14007_g1_i1
204bp
FPKM:10.55 TPM:4.71
3727 A_BomaMSG_c14009_g1_i1
219bp
FPKM:3.21 TPM:1.43
3728 A_BomaMSG_c14009_g1_i2
391bp
FPKM:2.12 TPM:0.95
3729 A_BomaMSG_c1400_g1_i1
533bp
uncharacterized_protein_LOC101741015_[Bombyx_mori]
FPKM:2.46 TPM:1.10
3730 A_BomaMSG_c14011_g1_i1
207bp
FPKM:2.24 TPM:1.00
3731 A_BomaMSG_c14012_g1_i1
414bp
uncharacterized_protein_LOC101742154_isoform_X1_[Bombyx_mori]
FPKM:2.29 TPM:1.02
3732 A_BomaMSG_c14013_g1_i1
302bp
lethal(2)_giant_larvae_protein_isoform_X2_[Bombyx_mori]
FPKM:2.21 TPM:0.99
3733 A_BomaMSG_c14014_g1_i1
348bp
FPKM:4.41 TPM:1.97
3734 A_BomaMSG_c14016_g1_i1
287bp
hypothetical_protein_KGM_208245_[Danaus_plexippus_plexippus]
FPKM:6.85 TPM:3.06
3735 A_BomaMSG_c14018_g1_i1
545bp
PREDICTED:_zinc_finger_BED_domain-containing_protein_1-like_[Amyelois_transitella]
GO:0000228 C nuclear chromosome
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004803 F transposase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0015629 C actin cytoskeleton
GO:0046872 F metal ion binding
GO:0046983 F protein dimerization activity
FPKM:1.87 TPM:0.84
3736 A_BomaMSG_c14019_g1_i1
337bp
FPKM:4.31 TPM:1.93
3737 A_BomaMSG_c1401_g1_i1
255bp
FPKM:2.54 TPM:1.14
3738 A_BomaMSG_c14020_g1_i1
458bp
FPKM:5.89 TPM:2.63
3739 A_BomaMSG_c14021_g1_i1
262bp
FPKM:1.19 TPM:0.53
3740 A_BomaMSG_c14021_g2_i1
409bp
FPKM:4.15 TPM:1.86
3741 A_BomaMSG_c14022_g1_i1
229bp
FPKM:4.17 TPM:1.86
3742 A_BomaMSG_c14024_g1_i1
467bp
FPKM:2.55 TPM:1.14
3743 A_BomaMSG_c14025_g1_i1
302bp
FPKM:4.41 TPM:1.97
3744 A_BomaMSG_c14027_g1_i1
308bp
uncharacterized_protein_LOC101741830_isoform_X3_[Bombyx_mori]
FPKM:4.67 TPM:2.09
3745 A_BomaMSG_c14029_g1_i1
213bp
bromodomain_adjacent_to_zinc_finger_domain_protein_1A_[Bombyx_mori]
FPKM:2.05 TPM:0.92
3746 A_BomaMSG_c1402_g1_i1
612bp
FPKM:2.77 TPM:1.24
3747 A_BomaMSG_c14031_g1_i1
375bp
olfactory_receptor_[Bombyx_mori]
FPKM:0.90 TPM:0.40
3748 A_BomaMSG_c14032_g1_i1
441bp
FPKM:5.09 TPM:2.27
3749 A_BomaMSG_c14033_g1_i1
516bp
10_kDa_heat_shock_protein,_mitochondrial_[Bombyx_mori]
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006457 P protein folding
FPKM:37.14 TPM:16.60
3750 A_BomaMSG_c14034_g1_i1
586bp
myosin-IB_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005903 C brush border
GO:0005938 C cell cortex
GO:0007368 P determination of left/right symmetry
GO:0007498 P mesoderm development
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0031941 C filamentous actin
GO:0032528 P microvillus organization
GO:0042623 F ATP hydrolysis activity
GO:0042742 P defense response to bacterium
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0071907 P determination of digestive tract left/right asymmetry
FPKM:2.78 TPM:1.24
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