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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2491 A_BomaMSG_c12719_g1_i1
211bp
FPKM:15.83 TPM:7.07
2492 A_BomaMSG_c1271_g1_i1
738bp
FPKM:5.27 TPM:2.35
2493 A_BomaMSG_c12722_g1_i1
336bp
methyltransferase-like_protein_22_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043231 C intracellular membrane-bounded organelle
FPKM:3.25 TPM:1.45
2494 A_BomaMSG_c12723_g1_i1
275bp
FPKM:5.75 TPM:2.57
2495 A_BomaMSG_c12725_g1_i1
1023bp
GPI_ethanolamine_phosphate_transferase_2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016254 P preassembly of GPI anchor in ER membrane
GO:0016740 F transferase activity
GO:0016780 F phosphotransferase activity, for other substituted phosphate groups
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0051267 F CP2 mannose-ethanolamine phosphotransferase activity
FPKM:3.01 TPM:1.34
2496 A_BomaMSG_c12726_g1_i1
544bp
FPKM:8.37 TPM:3.74
2497 A_BomaMSG_c12726_g2_i1
323bp
FPKM:3.11 TPM:1.39
2498 A_BomaMSG_c12727_g1_i1
508bp
ER_membrane_protein_complex_subunit_1_isoform_X2_[Bombyx_mori]
FPKM:3.76 TPM:1.68
2499 A_BomaMSG_c12728_g1_i1
312bp
probable_inactive_tRNA-specific_adenosine_deaminase-like_protein_3_[Bombyx_mori]
FPKM:2.76 TPM:1.23
2500 A_BomaMSG_c12728_g1_i2
265bp
FPKM:12.41 TPM:5.55
2501 A_BomaMSG_c12729_g1_i1
435bp
FPKM:8.97 TPM:4.01
2502 A_BomaMSG_c12730_g1_i1
750bp
proton-coupled_folate_transporter_isoform_X3_[Bombyx_mori]
GO:0005542 F folic acid binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:1.80 TPM:0.80
2503 A_BomaMSG_c12731_g1_i1
1127bp
protein_bicaudal_D_[Bombyx_mori]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007294 P germarium-derived oocyte fate determination
GO:0007309 P oocyte axis specification
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007312 P oocyte nucleus migration involved in oocyte dorsal/ventral axis specification
GO:0007314 P oocyte anterior/posterior axis specification
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0008298 P intracellular mRNA localization
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0017137 F small GTPase binding
GO:0019233 P sensory perception of pain
GO:0030100 P regulation of endocytosis
GO:0030154 P cell differentiation
GO:0030669 C clathrin-coated endocytic vesicle membrane
GO:0030727 P germarium-derived female germ-line cyst formation
GO:0032050 F clathrin heavy chain binding
GO:0045502 F dynein complex binding
GO:0048477 P oogenesis
GO:0048488 P synaptic vesicle endocytosis
GO:0050658 P RNA transport
GO:0051028 P mRNA transport
GO:0070727 P cellular macromolecule localization
GO:2000302 P positive regulation of synaptic vesicle exocytosis
GO:2000370 P positive regulation of clathrin-dependent endocytosis
FPKM:4.89 TPM:2.19
2504 A_BomaMSG_c12732_g1_i1
589bp
FPKM:3.68 TPM:1.64
2505 A_BomaMSG_c12733_g1_i1
668bp
vacuolar_protein_sorting-associated_protein_13C_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
GO:1905090 P negative regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
FPKM:2.34 TPM:1.05
2506 A_BomaMSG_c12734_g1_i1
852bp
proton-coupled_folate_transporter_[Bombyx_mori]
GO:0005542 F folic acid binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:5.95 TPM:2.66
2507 A_BomaMSG_c12735_g1_i1
496bp
FPKM:5.83 TPM:2.61
2508 A_BomaMSG_c12735_g2_i1
420bp
RNA-binding_protein_41_[Bombyx_mori]
FPKM:3.74 TPM:1.67
2509 A_BomaMSG_c12736_g1_i1
332bp
pre-rRNA-processing_protein_TSR1_homolog_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0022008 P neurogenesis
GO:0040018 P positive regulation of multicellular organism growth
GO:0042254 P ribosome biogenesis
GO:0042255 P ribosome assembly
GO:0090277 P positive regulation of peptide hormone secretion
FPKM:5.17 TPM:2.31
2510 A_BomaMSG_c12738_g1_i1
977bp
ceramide_synthase_5_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030148 P sphingolipid biosynthetic process
GO:0031965 C nuclear membrane
GO:0046513 P ceramide biosynthetic process
GO:0050291 F sphingosine N-acyltransferase activity
FPKM:1.30 TPM:0.58
2511 A_BomaMSG_c12739_g1_i1
207bp
FPKM:10.07 TPM:4.50
2512 A_BomaMSG_c1273_g1_i1
375bp
FPKM:2.09 TPM:0.93
2513 A_BomaMSG_c12741_g1_i1
314bp
dyslexia-associated_protein_KIAA0319_[Bombyx_mori]
GO:0001764 P neuron migration
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031901 C early endosome membrane
GO:2000171 P negative regulation of dendrite development
FPKM:6.55 TPM:2.93
2514 A_BomaMSG_c12742_g1_i1
259bp
FPKM:7.35 TPM:3.28
2515 A_BomaMSG_c12743_g1_i1
607bp
dnaJ_homolog_subfamily_C_member_13_isoform_X3_[Bombyx_mori]
GO:0001649 P osteoblast differentiation
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0007032 P endosome organization
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031901 C early endosome membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0070062 C extracellular exosome
GO:0071203 C WASH complex
GO:1902954 P regulation of early endosome to recycling endosome transport
GO:2000641 P regulation of early endosome to late endosome transport
FPKM:3.83 TPM:1.71
2516 A_BomaMSG_c12744_g1_i1
556bp
rab3_GTPase-activating_protein_catalytic_subunit_isoform_X1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0043547 P positive regulation of GTPase activity
FPKM:3.32 TPM:1.48
2517 A_BomaMSG_c12747_g1_i1
728bp
guanine_nucleotide-binding_protein_G(o)_subunit_alpha_1_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001664 F G protein-coupled receptor binding
GO:0001737 P establishment of imaginal disc-derived wing hair orientation
GO:0003924 F GTPase activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005834 C heterotrimeric G-protein complex
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007188 P adenylate cyclase-modulating G protein-coupled receptor signaling pathway
GO:0007419 P ventral cord development
GO:0007507 P heart development
GO:0008152 P metabolic process
GO:0008356 P asymmetric cell division
GO:0014045 P establishment of endothelial blood-brain barrier
GO:0016055 P Wnt signaling pathway
GO:0019001 F guanyl nucleotide binding
GO:0019722 P calcium-mediated signaling
GO:0019991 P septate junction assembly
GO:0030866 P cortical actin cytoskeleton organization
GO:0031683 F G-protein beta/gamma-subunit complex binding
GO:0032291 P axon ensheathment in central nervous system
GO:0042595 P behavioral response to starvation
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046872 F metal ion binding
GO:0050916 P sensory perception of sweet taste
GO:0060857 P establishment of glial blood-brain barrier
GO:0061343 P cell adhesion involved in heart morphogenesis
FPKM:4.66 TPM:2.08
2518 A_BomaMSG_c12748_g1_i1
401bp
methionine_synthase_reductase_isoform_X2_[Bombyx_mori]
FPKM:5.36 TPM:2.39
2519 A_BomaMSG_c12749_g1_i1
633bp
FPKM:2.65 TPM:1.18
2520 A_BomaMSG_c12750_g1_i1
251bp
ecto-nucleotidase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006164 P purine nucleotide biosynthetic process
GO:0006196 P AMP catabolic process
GO:0007159 P leukocyte cell-cell adhesion
GO:0007420 P brain development
GO:0008198 F ferrous iron binding
GO:0008253 F 5'-nucleotidase activity
GO:0009166 P nucleotide catabolic process
GO:0009986 C cell surface
GO:0010044 P response to aluminum ion
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0031225 C anchored component of membrane
GO:0046085 P adenosine metabolic process
GO:0046086 P adenosine biosynthetic process
GO:0046872 F metal ion binding
GO:0046889 P positive regulation of lipid biosynthetic process
GO:0050728 P negative regulation of inflammatory response
GO:0070062 C extracellular exosome
GO:0097060 C synaptic membrane
FPKM:1.98 TPM:0.88
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