SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c12743_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		dnaJ_homolog_subfamily_C_member_13_isoform_X3_[Bombyx_mori]
Ontology
GO:0001649 P osteoblast differentiation
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0007032 P endosome organization
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031901 C early endosome membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0070062 C extracellular exosome
GO:0071203 C WASH complex
GO:1902954 P regulation of early endosome to recycling endosome transport
GO:2000641 P regulation of early endosome to late endosome transport
Transcript
Level		FPKM:3.83 TPM:1.71
ORF EntryO_BomaMSG3316_3prime_partial:A_BomaMSG_c12743_g1_i1
Sequence
(Nucleotide)
GTCGGATTATTTTGTGATCAACATAATACTAATCGTATTTTAGTAATTATTTTATGTAAT
ATGTGGTTCTTATTGGATATCAGCTGAAGTTATTGAAACATAATCGTATGTTCATAGTTT
GAAATGTTAAAATGATTCCACTAAAGGACAATCAGGATGTGGCATCGTTCCTTGTCACAA
AACACTCTTGGAAGGGGAAGTACAAGAGAGTGTTTTCTATTGGAACTCATGGAATTACTA
CATACAATCCAGATCGCCTGGAAGTCACCAACAAATGGCTGTATGCTGATGTAGTTACCA
TTGCATCGGCAAAGCATTCAAACTCTACTGCCAACCATGACTTCACACTTGTCATGAAAA
AAGAAAAGAAAGTGGACTCAATGCGATTTTCTTCAGAGCACAAGTGTTTGATACTCACTG
AAGCTTTTAAATATAGGCATTTGTTTGCGGAGAAACCAAAGGATGTTTTTAGATACCAAG
CATACAAACATCACTGGAGTGGAACAAGACTACCAATAGTACTTGAAGTTGGGCCTTGTG
CTTTAGAACAGCTAGACCCATCGACACACACTCAGCTAGCCTTCTACCCCTACTGTGATA
TACAGGG
(607 bp)

- SilkBase 1999-2023 -