SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/42653
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1921 A_BomaMSG_c1208_g1_i2
408bp
FPKM:4.69 TPM:2.10
1922 A_BomaMSG_c12090_g1_i1
395bp
FPKM:9.61 TPM:4.29
1923 A_BomaMSG_c12091_g1_i1
672bp
longitudinals_lacking_protein,_isoforms_H/M/V,_partial_[Bombyx_mori]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007464 P R3/R4 cell fate commitment
GO:0007526 P larval somatic muscle development
GO:0008406 P gonad development
GO:0010906 P regulation of glucose metabolic process
GO:0016199 P axon midline choice point recognition
GO:0019730 P antimicrobial humoral response
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0031987 P locomotion involved in locomotory behavior
GO:0035167 P larval lymph gland hemopoiesis
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045467 P R7 cell development
GO:0045476 P nurse cell apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048813 P dendrite morphogenesis
GO:0048854 P brain morphogenesis
FPKM:30.56 TPM:13.66
1924 A_BomaMSG_c12092_g1_i1
253bp
uncharacterized_protein_LOC101742695_[Bombyx_mori]
FPKM:5.18 TPM:2.31
1925 A_BomaMSG_c12092_g2_i1
267bp
uncharacterized_protein_LOC101742695_[Bombyx_mori]
FPKM:7.43 TPM:3.32
1926 A_BomaMSG_c12093_g1_i1
528bp
FPKM:105.63 TPM:47.20
1927 A_BomaMSG_c12094_g1_i1
311bp
tau-like_protein_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0008017 F microtubule binding
GO:0015631 F tubulin binding
GO:0016020 C membrane
GO:0030424 C axon
GO:0042995 C cell projection
FPKM:3.34 TPM:1.49
1928 A_BomaMSG_c12095_g1_i1
457bp
FPKM:1.97 TPM:0.88
1929 A_BomaMSG_c12096_g1_i1
372bp
FPKM:4.54 TPM:2.03
1930 A_BomaMSG_c12097_g1_i1
408bp
uncharacterized_protein_LOC105842568_[Bombyx_mori]
FPKM:2.61 TPM:1.16
1931 A_BomaMSG_c12098_g1_i1
328bp
FPKM:3.40 TPM:1.52
1932 A_BomaMSG_c12099_g1_i1
362bp
FPKM:1.59 TPM:0.71
1933 A_BomaMSG_c1209_g1_i1
314bp
FPKM:2.46 TPM:1.10
1934 A_BomaMSG_c12100_g1_i1
376bp
FPKM:2.68 TPM:1.20
1935 A_BomaMSG_c12101_g1_i1
372bp
FPKM:1.82 TPM:0.81
1936 A_BomaMSG_c12101_g1_i2
311bp
FPKM:0.00 TPM:0.00
1937 A_BomaMSG_c12103_g1_i1
398bp
FPKM:3.80 TPM:1.70
1938 A_BomaMSG_c12104_g1_i1
821bp
branched-chain-amino-acid_aminotransferase,_cytosolic_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004084 F branched-chain-amino-acid transaminase activity
GO:0008152 P metabolic process
GO:0008483 F transaminase activity
GO:0008652 P cellular amino acid biosynthetic process
GO:0009081 P branched-chain amino acid metabolic process
GO:0009082 P branched-chain amino acid biosynthetic process
GO:0016740 F transferase activity
GO:0052654 F L-leucine transaminase activity
GO:0052655 F L-valine transaminase activity
GO:0052656 F L-isoleucine transaminase activity
FPKM:3.01 TPM:1.35
1939 A_BomaMSG_c12105_g1_i1
429bp
NFX1-type_zinc_finger-containing_protein_1_[Bombyx_mori]
FPKM:1.26 TPM:0.56
1940 A_BomaMSG_c12105_g1_i2
706bp
NFX1-type_zinc_finger-containing_protein_1_[Bombyx_mori]
GO:0003700 F DNA-binding transcription factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
FPKM:1.91 TPM:0.85
1941 A_BomaMSG_c12106_g1_i1
274bp
FPKM:1.14 TPM:0.51
1942 A_BomaMSG_c12106_g1_i2
498bp
FPKM:0.95 TPM:0.42
1943 A_BomaMSG_c12107_g1_i1
584bp
LOW_QUALITY_PROTEIN:_G_protein-coupled_receptor_kinase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001664 F G protein-coupled receptor binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004703 F G protein-coupled receptor kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007603 P phototransduction, visible light
GO:0016060 P metarhodopsin inactivation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035091 F phosphatidylinositol binding
GO:0050254 F rhodopsin kinase activity
FPKM:3.57 TPM:1.59
1944 A_BomaMSG_c12108_g1_i1
305bp
acetyl-CoA_carboxylase_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003989 F acetyl-CoA carboxylase activity
GO:0004075 F biotin carboxylase activity
GO:0005524 F ATP binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:2001295 P malonyl-CoA biosynthetic process
FPKM:0.87 TPM:0.39
1945 A_BomaMSG_c12108_g2_i1
506bp
acetyl-CoA_carboxylase_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003989 F acetyl-CoA carboxylase activity
GO:0004075 F biotin carboxylase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006084 P acetyl-CoA metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0010629 P negative regulation of gene expression
GO:0010884 P positive regulation of lipid storage
GO:0010906 P regulation of glucose metabolic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016874 F ligase activity
GO:0031667 P response to nutrient levels
GO:0031999 P negative regulation of fatty acid beta-oxidation
GO:0043086 P negative regulation of catalytic activity
GO:0046322 P negative regulation of fatty acid oxidation
GO:0046872 F metal ion binding
GO:0050995 P negative regulation of lipid catabolic process
GO:0051289 P protein homotetramerization
GO:0060421 P positive regulation of heart growth
GO:0097009 P energy homeostasis
GO:2001295 P malonyl-CoA biosynthetic process
FPKM:1.13 TPM:0.51
1946 A_BomaMSG_c12109_g1_i1
1014bp
FPKM:44.26 TPM:19.78
1947 A_BomaMSG_c1210_g1_i1
1108bp
insulin-degrading_enzyme_isoform_X2_[Bombyx_mori]
GO:0002021 P response to dietary excess
GO:0003824 F catalytic activity
GO:0004222 F metalloendopeptidase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0008340 P determination of adult lifespan
GO:0014067 P negative regulation of phosphatidylinositol 3-kinase signaling
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0043171 P peptide catabolic process
GO:0045089 P positive regulation of innate immune response
GO:0045926 P negative regulation of growth
GO:0046662 P regulation of oviposition
GO:0046872 F metal ion binding
GO:0048638 P regulation of developmental growth
GO:0050829 P defense response to Gram-negative bacterium
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0090062 P regulation of trehalose metabolic process
GO:1901143 P insulin catabolic process
FPKM:5.27 TPM:2.36
1948 A_BomaMSG_c12110_g1_i1
353bp
estradiol_17-beta-dehydrogenase_8_[Bombyx_mori]
GO:0003857 F 3-hydroxyacyl-CoA dehydrogenase activity
GO:0004303 F estradiol 17-beta-dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005740 C mitochondrial envelope
GO:0005759 C mitochondrial matrix
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006694 P steroid biosynthetic process
GO:0006703 P estrogen biosynthetic process
GO:0008152 P metabolic process
GO:0008209 P androgen metabolic process
GO:0008210 P estrogen metabolic process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0047035 F testosterone dehydrogenase (NAD+) activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:0.00 TPM:0.00
1949 A_BomaMSG_c12110_g1_i2
430bp
estradiol_17-beta-dehydrogenase_8_[Bombyx_mori]
GO:0003857 F 3-hydroxyacyl-CoA dehydrogenase activity
GO:0004303 F estradiol 17-beta-dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005740 C mitochondrial envelope
GO:0005759 C mitochondrial matrix
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006694 P steroid biosynthetic process
GO:0006703 P estrogen biosynthetic process
GO:0008152 P metabolic process
GO:0008209 P androgen metabolic process
GO:0008210 P estrogen metabolic process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0047035 F testosterone dehydrogenase (NAD+) activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.92 TPM:0.86
1950 A_BomaMSG_c12111_g1_i1
418bp
uncharacterized_protein_LOC101742101_[Bombyx_mori]
FPKM:3.51 TPM:1.57
previous next from show/42653

- SilkBase 1999-2023 -