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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1741 A_BomaMSG_c11912_g1_i1
614bp
protein_wntless_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0017147 F Wnt-protein binding
GO:0030054 C cell junction
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0030285 C integral component of synaptic vesicle membrane
GO:0031227 C intrinsic component of endoplasmic reticulum membrane
GO:0031228 C intrinsic component of Golgi membrane
GO:0031302 C intrinsic component of endosome membrane
GO:0031594 C neuromuscular junction
GO:0033157 P regulation of intracellular protein transport
GO:0042734 C presynaptic membrane
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0050714 P positive regulation of protein secretion
FPKM:2.18 TPM:0.97
1742 A_BomaMSG_c11914_g1_i1
485bp
gastrula_zinc_finger_protein_XlCGF26.1-like_isoform_X1_[Helicoverpa_armigera]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0071333 P cellular response to glucose stimulus
FPKM:2.81 TPM:1.26
1743 A_BomaMSG_c11916_g1_i1
715bp
PREDICTED:_LOW_QUALITY_PROTEIN:_protein_4.1_homolog_[Papilio_machaon]
GO:0003015 P heart process
GO:0003674 F molecular_function
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0005920 C smooth septate junction
GO:0006612 P protein targeting to membrane
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007435 P salivary gland morphogenesis
GO:0007527 P adult somatic muscle development
GO:0008092 F cytoskeletal protein binding
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0009790 P embryo development
GO:0019991 P septate junction assembly
GO:0030054 C cell junction
GO:0035151 P regulation of tube size, open tracheal system
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045216 P cell-cell junction organization
GO:0060857 P establishment of glial blood-brain barrier
GO:0061343 P cell adhesion involved in heart morphogenesis
FPKM:2.98 TPM:1.33
1744 A_BomaMSG_c11917_g1_i1
347bp
ets_DNA-binding_protein_pokkuri-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000165 P MAPK cascade
GO:0001709 P cell fate determination
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0007254 P JNK cascade
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007391 P dorsal closure
GO:0007464 P R3/R4 cell fate commitment
GO:0007517 P muscle organ development
GO:0008340 P determination of adult lifespan
GO:0008406 P gonad development
GO:0019904 F protein domain specific binding
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0035155 P negative regulation of terminal cell fate specification, open tracheal system
GO:0035157 P negative regulation of fusion cell fate specification
GO:0043565 F sequence-specific DNA binding
GO:0045316 P negative regulation of compound eye photoreceptor development
GO:0045467 P R7 cell development
GO:0045596 P negative regulation of cell differentiation
GO:0045610 P regulation of hemocyte differentiation
GO:0045678 P positive regulation of R7 cell differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046533 P negative regulation of photoreceptor cell differentiation
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0048666 P neuron development
GO:0048747 P muscle cell development
GO:0048749 P compound eye development
GO:0048813 P dendrite morphogenesis
GO:0050767 P regulation of neurogenesis
GO:0060233 P oenocyte delamination
GO:0090175 P regulation of establishment of planar polarity
FPKM:1.36 TPM:0.61
1745 A_BomaMSG_c11918_g1_i1
518bp
uncharacterized_protein_LOC110374342_[Helicoverpa_armigera]
FPKM:3.11 TPM:1.39
1746 A_BomaMSG_c11919_g1_i1
470bp
WD_repeat-containing_protein_81_[Bombyx_mori]
FPKM:2.52 TPM:1.13
1747 A_BomaMSG_c1191_g1_i1
781bp
forkhead_box_protein_J3_isoform_X2_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0043565 F sequence-specific DNA binding
FPKM:4.16 TPM:1.86
1748 A_BomaMSG_c11920_g1_i1
366bp
E3_ubiquitin-protein_ligase_RFWD2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0010212 P response to ionizing radiation
GO:0016567 P protein ubiquitination
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
FPKM:4.05 TPM:1.81
1749 A_BomaMSG_c11921_g1_i1
556bp
FPKM:5.47 TPM:2.44
1750 A_BomaMSG_c11923_g1_i1
210bp
uncharacterized_protein_LOC105842783_[Bombyx_mori]
FPKM:3.21 TPM:1.44
1751 A_BomaMSG_c11925_g1_i1
277bp
FPKM:3.69 TPM:1.65
1752 A_BomaMSG_c11926_g1_i1
398bp
FPKM:2.71 TPM:1.21
1753 A_BomaMSG_c11926_g1_i2
319bp
FPKM:0.00 TPM:0.00
1754 A_BomaMSG_c11927_g1_i1
1750bp
elongation_factor_1-alpha_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006414 P translational elongation
FPKM:3296.24 TPM:1473.00
1755 A_BomaMSG_c11927_g1_i2
1813bp
elongation_factor_1-alpha_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006414 P translational elongation
FPKM:555.51 TPM:248.24
1756 A_BomaMSG_c11928_g1_i1
234bp
FPKM:6.29 TPM:2.81
1757 A_BomaMSG_c11929_g1_i1
276bp
FPKM:3.19 TPM:1.42
1758 A_BomaMSG_c1192_g1_i1
341bp
FPKM:2.11 TPM:0.94
1759 A_BomaMSG_c11932_g1_i1
459bp
FPKM:4.14 TPM:1.85
1760 A_BomaMSG_c11932_g1_i2
294bp
FPKM:0.00 TPM:0.00
1761 A_BomaMSG_c11933_g1_i1
464bp
probable_methyltransferase-like_protein_15_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0070475 P rRNA base methylation
GO:0071424 F rRNA (cytosine-N4-)-methyltransferase activity
FPKM:2.36 TPM:1.05
1762 A_BomaMSG_c11934_g1_i1
852bp
exocyst_complex_component_6_[Bombyx_mori]
GO:0000145 C exocyst
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0006904 P vesicle docking involved in exocytosis
GO:0015031 P protein transport
FPKM:2.69 TPM:1.20
1763 A_BomaMSG_c11935_g1_i1
597bp
BUD13_homolog_[Bombyx_mori]
GO:0005634 C nucleus
GO:0008150 P biological_process
GO:0044822 F RNA binding
FPKM:3.46 TPM:1.55
1764 A_BomaMSG_c11936_g1_i1
263bp
FPKM:4.73 TPM:2.11
1765 A_BomaMSG_c11939_g1_i1
212bp
serine/threonine-protein_kinase_PAK_mbt_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000187 P obsolete activation of MAPK activity
GO:0000278 P mitotic cell cycle
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0006468 P protein phosphorylation
GO:0007010 P cytoskeleton organization
GO:0007030 P Golgi organization
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016319 P mushroom body development
GO:0016740 F transferase activity
GO:0017048 F small GTPase binding
GO:0018105 P peptidyl-serine phosphorylation
GO:0023014 P signal transduction
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0045315 P positive regulation of compound eye photoreceptor development
GO:0045792 P negative regulation of cell size
GO:0046331 P lateral inhibition
GO:0048749 P compound eye development
GO:2000047 P regulation of cell-cell adhesion mediated by cadherin
FPKM:3.12 TPM:1.39
1766 A_BomaMSG_c11939_g2_i1
341bp
FPKM:1.76 TPM:0.79
1767 A_BomaMSG_c11940_g1_i1
487bp
differentially_expressed_in_FDCP_8_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0008150 P biological_process
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
FPKM:7.19 TPM:3.21
1768 A_BomaMSG_c11941_g1_i1
300bp
FPKM:3.13 TPM:1.40
1769 A_BomaMSG_c11942_g1_i1
292bp
FPKM:0.00 TPM:0.00
1770 A_BomaMSG_c11942_g1_i2
465bp
FPKM:3.63 TPM:1.62
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