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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1681 A_BomaMSG_c11827_g1_i1
2213bp
PREDICTED:_V-type_proton_ATPase_subunit_H_isoform_X2_[Papilio_polytes]
GO:0000221 C vacuolar proton-transporting V-type ATPase, V1 domain
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016820 F ATPase-coupled transmembrane transporter activity
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
FPKM:31.63 TPM:14.13
1682 A_BomaMSG_c11827_g1_i2
2015bp
vacuolar_ATP_synthase_subunit_H_[Bombyx_mori]
GO:0000221 C vacuolar proton-transporting V-type ATPase, V1 domain
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016820 F ATPase-coupled transmembrane transporter activity
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
FPKM:17.81 TPM:7.96
1683 A_BomaMSG_c11828_g1_i1
334bp
FPKM:2.19 TPM:0.98
1684 A_BomaMSG_c11830_g1_i1
278bp
FPKM:2.09 TPM:0.94
1685 A_BomaMSG_c11831_g1_i1
2733bp
peroxidase_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0005506 F iron ion binding
GO:0005576 C extracellular region
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0007306 P eggshell chorion assembly
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0022008 P neurogenesis
GO:0042600 C egg chorion
GO:0042744 P hydrogen peroxide catabolic process
GO:0045471 P response to ethanol
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
FPKM:2473.92 TPM:1105.53
1686 A_BomaMSG_c11832_g1_i1
663bp
LOW_QUALITY_PROTEIN:_cytokine_receptor_[Bombyx_mori]
GO:0001745 P compound eye morphogenesis
GO:0002009 P morphogenesis of an epithelium
GO:0004888 F transmembrane signaling receptor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0006955 P immune response
GO:0007259 P receptor signaling pathway via JAK-STAT
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007298 P border follicle cell migration
GO:0007350 P blastoderm segmentation
GO:0007424 P open tracheal system development
GO:0007425 P epithelial cell fate determination, open tracheal system
GO:0007442 P hindgut morphogenesis
GO:0007616 P long-term memory
GO:0008284 P positive regulation of cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0019955 F cytokine binding
GO:0042981 P regulation of apoptotic process
GO:0045475 P locomotor rhythm
GO:0045824 P negative regulation of innate immune response
GO:0046982 F protein heterodimerization activity
GO:0050829 P defense response to Gram-negative bacterium
GO:0060429 P epithelium development
FPKM:3.02 TPM:1.35
1687 A_BomaMSG_c11834_g1_i1
290bp
uncharacterized_protein_LOC110374818_[Helicoverpa_armigera]
FPKM:4.31 TPM:1.93
1688 A_BomaMSG_c11835_g1_i1
373bp
cell_wall-associated_hydrolase_[Phaseolus_vulgaris]
FPKM:6.33 TPM:2.83
1689 A_BomaMSG_c11836_g1_i1
1311bp
tumor_suppressor_candidate_3_[Bombyx_mori]
GO:0004579 F dolichyl-diphosphooligosaccharide-protein glycotransferase activity
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0008250 C oligosaccharyltransferase complex
GO:0015095 F magnesium ion transmembrane transporter activity
GO:0015693 P magnesium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0050890 P cognition
GO:1903830 P magnesium ion transmembrane transport
FPKM:74.26 TPM:33.18
1690 A_BomaMSG_c11837_g1_i1
717bp
FPKM:4.04 TPM:1.80
1691 A_BomaMSG_c11839_g1_i1
425bp
FPKM:5.38 TPM:2.40
1692 A_BomaMSG_c1183_g1_i1
300bp
FPKM:1.34 TPM:0.60
1693 A_BomaMSG_c11840_g1_i1
412bp
FPKM:3.34 TPM:1.49
1694 A_BomaMSG_c11841_g1_i1
287bp
FPKM:5.38 TPM:2.41
1695 A_BomaMSG_c11842_g1_i1
364bp
FPKM:3.14 TPM:1.40
1696 A_BomaMSG_c11843_g1_i1
667bp
uncharacterized_protein_LOC101737909_[Bombyx_mori]
FPKM:3.39 TPM:1.51
1697 A_BomaMSG_c11844_g1_i1
395bp
tyrosine-protein_phosphatase_non-receptor_type_4_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004726 F non-membrane spanning protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0008092 F cytoskeletal protein binding
GO:0009898 C cytoplasmic side of plasma membrane
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
FPKM:1.65 TPM:0.74
1698 A_BomaMSG_c11845_g1_i1
424bp
uncharacterized_protein_LOC101743721_isoform_X2_[Bombyx_mori]
FPKM:3.68 TPM:1.65
1699 A_BomaMSG_c11846_g1_i1
271bp
FPKM:3.32 TPM:1.48
1700 A_BomaMSG_c11847_g1_i1
1212bp
translation_factor_GUF1_homolog,_mitochondrial_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0016020 C membrane
GO:0016787 F hydrolase activity
FPKM:1.29 TPM:0.58
1701 A_BomaMSG_c11847_g1_i2
899bp
translation_factor_GUF1_homolog,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0016020 C membrane
GO:0016787 F hydrolase activity
FPKM:2.57 TPM:1.15
1702 A_BomaMSG_c11848_g1_i1
428bp
FPKM:3.39 TPM:1.51
1703 A_BomaMSG_c11848_g2_i1
336bp
FPKM:3.97 TPM:1.78
1704 A_BomaMSG_c11849_g1_i1
6387bp
bicaudal_D-related_protein_homolog_[Helicoverpa_armigera]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0048812 P neuron projection morphogenesis
FPKM:58.22 TPM:26.02
1705 A_BomaMSG_c11850_g1_i1
208bp
FPKM:5.51 TPM:2.46
1706 A_BomaMSG_c11851_g1_i1
803bp
ras-related_protein_Rab-31_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019003 F GDP binding
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031623 P receptor internalization
GO:0032588 C trans-Golgi network membrane
GO:0032869 P cellular response to insulin stimulus
GO:0043001 P Golgi to plasma membrane protein transport
GO:0045055 P regulated exocytosis
GO:0045335 C phagocytic vesicle
GO:0048193 P Golgi vesicle transport
GO:0090382 P phagosome maturation
FPKM:2.78 TPM:1.24
1707 A_BomaMSG_c11852_g1_i1
224bp
leucine-rich_repeat_flightless-interacting_protein_2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016055 P Wnt signaling pathway
GO:0030275 F LRR domain binding
FPKM:12.40 TPM:5.54
1708 A_BomaMSG_c11853_g1_i1
425bp
cytochrome_c_oxidase_subunit_6C_[Bombyx_mori]
GO:0004129 F cytochrome-c oxidase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1902600 P proton transmembrane transport
FPKM:19.57 TPM:8.74
1709 A_BomaMSG_c11854_g1_i1
279bp
trafficking_protein_particle_complex_subunit_11_[Bombyx_mori]
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0016192 P vesicle-mediated transport
FPKM:1.10 TPM:0.49
1710 A_BomaMSG_c11854_g1_i2
362bp
trafficking_protein_particle_complex_subunit_11_[Bombyx_mori]
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0016192 P vesicle-mediated transport
FPKM:8.85 TPM:3.95
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