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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1651 A_BomaMSG_c11788_g2_i1
281bp
ATP-binding_cassette_sub-family_A_member_3_[Bombyx_mori]
FPKM:1.02 TPM:0.46
1652 A_BomaMSG_c11789_g1_i1
328bp
FPKM:4.15 TPM:1.85
1653 A_BomaMSG_c1178_g1_i1
343bp
FPKM:3.83 TPM:1.71
1654 A_BomaMSG_c11791_g1_i1
202bp
FPKM:2.42 TPM:1.08
1655 A_BomaMSG_c11792_g1_i1
378bp
FPKM:2.65 TPM:1.19
1656 A_BomaMSG_c11795_g1_i1
280bp
spermatogenesis-associated_protein_6_isoform_X3_[Bombyx_mori]
FPKM:5.67 TPM:2.53
1657 A_BomaMSG_c11796_g1_i1
529bp
protein_penguin_[Bombyx_mori]
FPKM:3.20 TPM:1.43
1658 A_BomaMSG_c11797_g1_i1
701bp
uncharacterized_protein_LOC101745027_isoform_X3_[Bombyx_mori]
FPKM:4.15 TPM:1.86
1659 A_BomaMSG_c11798_g1_i1
201bp
1-phosphatidylinositol-4,5-bisphosphate_phosphodiesterase_beta-4_[Bombyx_mori]
GO:0001580 P detection of chemical stimulus involved in sensory perception of bitter taste
GO:0002385 P mucosal immune response
GO:0004435 F phosphatidylinositol phospholipase C activity
GO:0004629 F phospholipase C activity
GO:0004871 F obsolete signal transducer activity
GO:0005096 F GTPase activator activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0006629 P lipid metabolic process
GO:0006644 P phospholipid metabolic process
GO:0006651 P diacylglycerol biosynthetic process
GO:0007165 P signal transduction
GO:0007601 P visual perception
GO:0007602 P phototransduction
GO:0007608 P sensory perception of smell
GO:0008081 F phosphoric diester hydrolase activity
GO:0008344 P adult locomotory behavior
GO:0008377 P light-induced release of internally sequestered calcium ion
GO:0008654 P phospholipid biosynthetic process
GO:0009649 P entrainment of circadian clock
GO:0016027 C inaD signaling complex
GO:0016028 C rhabdomere
GO:0016042 P lipid catabolic process
GO:0016056 P rhodopsin mediated signaling pathway
GO:0016059 P deactivation of rhodopsin mediated signaling
GO:0016787 F hydrolase activity
GO:0019722 P calcium-mediated signaling
GO:0035556 P intracellular signal transduction
GO:0043052 P thermotaxis
GO:0043153 P entrainment of circadian clock by photoperiod
GO:0043547 P positive regulation of GTPase activity
GO:0045494 P photoreceptor cell maintenance
GO:0046488 P phosphatidylinositol metabolic process
GO:0046673 P negative regulation of compound eye retinal cell programmed cell death
GO:0050896 P response to stimulus
GO:0051482 P positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway
GO:2000370 P positive regulation of clathrin-dependent endocytosis
FPKM:1.23 TPM:0.55
1660 A_BomaMSG_c11799_g1_i1
291bp
PREDICTED:_uncharacterized_protein_LOC106709215_isoform_X2_[Papilio_machaon]
FPKM:2.38 TPM:1.06
1661 A_BomaMSG_c117_g1_i1
286bp
FPKM:1.48 TPM:0.66
1662 A_BomaMSG_c11801_g1_i1
234bp
LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1663 A_BomaMSG_c11803_g1_i1
300bp
FPKM:8.05 TPM:3.60
1664 A_BomaMSG_c11804_g1_i1
442bp
FPKM:2.07 TPM:0.93
1665 A_BomaMSG_c11805_g1_i1
513bp
uncharacterized_protein_LOC101737598_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0090630 P activation of GTPase activity
GO:1901096 P regulation of autophagosome maturation
FPKM:4.82 TPM:2.15
1666 A_BomaMSG_c11806_g1_i1
251bp
FPKM:3.30 TPM:1.47
1667 A_BomaMSG_c11807_g1_i1
406bp
FPKM:4.63 TPM:2.07
1668 A_BomaMSG_c11807_g1_i2
214bp
FPKM:2.39 TPM:1.07
1669 A_BomaMSG_c11809_g1_i1
398bp
uncharacterized_protein_LOC101742002_isoform_X2_[Bombyx_mori]
FPKM:5.15 TPM:2.30
1670 A_BomaMSG_c1180_g1_i1
273bp
FPKM:9.80 TPM:4.38
1671 A_BomaMSG_c11810_g1_i1
511bp
hsp70-binding_protein_1_[Bombyx_mori]
FPKM:8.58 TPM:3.83
1672 A_BomaMSG_c11811_g1_i1
265bp
reverse_transcriptase,_partial_[Bombyx_mori]
FPKM:1.16 TPM:0.52
1673 A_BomaMSG_c11812_g1_i1
460bp
LOW_QUALITY_PROTEIN:_neuroblastoma-amplified_sequence_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0005783 C endoplasmic reticulum
GO:0006810 P transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0015031 P protein transport
GO:0043009 P chordate embryonic development
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
FPKM:2.82 TPM:1.26
1674 A_BomaMSG_c11814_g1_i1
203bp
FPKM:3.57 TPM:1.60
1675 A_BomaMSG_c11815_g1_i1
206bp
FPKM:9.09 TPM:4.06
1676 A_BomaMSG_c11816_g1_i1
253bp
FPKM:7.77 TPM:3.47
1677 A_BomaMSG_c11817_g1_i1
269bp
FPKM:5.62 TPM:2.51
1678 A_BomaMSG_c11823_g1_i1
211bp
FPKM:4.59 TPM:2.05
1679 A_BomaMSG_c11823_g1_i2
1164bp
BUB3-interacting_and_GLEBS_motif-containing_protein_ZNF207_isoform_X2_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0001578 P microtubule bundle formation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0008017 F microtubule binding
GO:0008608 P attachment of spindle microtubules to kinetochore
GO:0046785 P microtubule polymerization
GO:0046872 F metal ion binding
GO:0050821 P protein stabilization
GO:0051301 P cell division
GO:0051983 P regulation of chromosome segregation
GO:0090307 P mitotic spindle assembly
GO:1990047 C spindle matrix
FPKM:19.82 TPM:8.85
1680 A_BomaMSG_c11826_g1_i1
233bp
FPKM:8.75 TPM:3.91
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