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Last updated: 2022/11/18

Search Silkworm GeneModel

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No. Name
Length
 JBrowse Chromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
5191 BGIBMGA005191-TA
363bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_UPI0000D571DB (38%/68)
Cluster: PREDICTED: similar to CG7998-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG7998-PA - Tribolium castaneum
GO:0003824 F catalytic activity
GO:0005515 F protein binding
GO:0005975 P carbohydrate metabolic process
GO:0006096 P glycolysis
GO:0006099 P tricarboxylic acid cycle
GO:0006100 P tricarboxylic acid cycle intermediate metabolic process
GO:0006108 P malate metabolic process
GO:0016491 F oxidoreductase activity
GO:0016615 F malate dehydrogenase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0030060 F L-malate dehydrogenase activity
GO:0044262 P cellular carbohydrate metabolic process
GO:0005739 C mitochondrion
GO:0009507 C chloroplast
GO:0006097 P glyoxylate cycle
GO:0009514 C glyoxysome
5192 BGIBMGA005192-TA
714bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_Q4Q3J3 (30%/179)
Cluster: Malate dehydrogenase, putative; n=3; Leishmania|Rep: Malate dehydrogenase, putative - Leishmania major
GO:0003824 F catalytic activity
GO:0005975 P carbohydrate metabolic process
GO:0006096 P glycolysis
GO:0006100 P tricarboxylic acid cycle intermediate metabolic process
GO:0006108 P malate metabolic process
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0030060 F L-malate dehydrogenase activity
GO:0044262 P cellular carbohydrate metabolic process
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006099 P tricarboxylic acid cycle
GO:0008150 P biological_process
GO:0016615 F malate dehydrogenase activity
GO:0005743 C mitochondrial inner membrane
5193 BGIBMGA005193-TA
1116bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_UPI0000D5754F (49%/371)
Cluster: PREDICTED: similar to CG9347-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG9347-PA - Tribolium castaneum
GO:0016702 F oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0003834 F beta-carotene 15,15'-monooxygenase activity
GO:0007602 P phototransduction
GO:0009110 P vitamin biosynthetic process
GO:0016119 P carotene metabolic process
GO:0035238 P vitamin A biosynthetic process
5194 BGIBMGA005194-TA
354bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_Q7KTN8 (43%/94)
Cluster: CG11020-PB, isoform B; n=10; Endopterygota|Rep: CG11020-PB, isoform B - Drosophila melanogaster (Fruit fly)
GO:0005216 F ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007605 P sensory perception of sound
GO:0007638 P mechanosensory behavior
GO:0008381 F mechanically-gated ion channel activity
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0030506 F ankyrin binding
GO:0050910 P detection of mechanical stimulus during sensory perception of sound
GO:0050954 P sensory perception of mechanical stimulus
GO:0050974 P detection of mechanical stimulus during sensory perception
5195 BGIBMGA005195-TA
6261bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_Q7KTN8 (73%/1213)
Cluster: CG11020-PB, isoform B; n=10; Endopterygota|Rep: CG11020-PB, isoform B - Drosophila melanogaster (Fruit fly)
GO:0005216 F ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007605 P sensory perception of sound
GO:0007638 P mechanosensory behavior
GO:0008381 F mechanically-gated ion channel activity
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0030506 F ankyrin binding
GO:0050910 P detection of mechanical stimulus during sensory perception of sound
GO:0050954 P sensory perception of mechanical stimulus
GO:0050974 P detection of mechanical stimulus during sensory perception
5196 BGIBMGA005196-TA
1086bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_Q173Z0 (28%/310)
Cluster: Vitellogenin, putative; n=4; Diptera|Rep: Vitellogenin, putative - Aedes aegypti (Yellowfever mosquito)
GO:0003824 F catalytic activity
GO:0006629 P lipid metabolic process
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
5197 BGIBMGA005197-TA
1932bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_Q9VEC1 (59%/654)
Cluster: Mediator of RNA polymerase II transcription subunit 17; n=7; Endopterygota|Rep: Mediator of RNA polymerase II transcription subunit 17 - Drosophila melanogaster (Fruit fly)
GO:0003713 F transcription coactivator activity
GO:0000119 C mediator complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0006357 P regulation of transcription from RNA polymerase II promoter
GO:0006366 P transcription from RNA polymerase II promoter
GO:0007275 P multicellular organismal development
GO:0009987 P cellular process
GO:0016455 F RNA polymerase II transcription mediator activity
GO:0045498 P sex comb development
GO:0003712 F transcription cofactor activity
GO:0004872 F receptor activity
GO:0005667 C transcription factor complex
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0016563 F transcription activator activity
GO:0030374 F ligand-dependent nuclear receptor transcription coactivator activity
GO:0030518 P steroid hormone receptor signaling pathway
GO:0030521 P androgen receptor signaling pathway
GO:0030528 F transcription regulator activity
GO:0042809 F vitamin D receptor binding
GO:0045944 P positive regulation of transcription from RNA polymerase II promoter
GO:0046966 F thyroid hormone receptor binding
5198 BGIBMGA005198-TA
357bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_UPI0000D55CD5 (38%/63)
Cluster: PREDICTED: similar to CG3921-PA; n=3; Endopterygota|Rep: PREDICTED: similar to CG3921-PA - Tribolium castaneum
GO:0005044 F scavenger receptor activity
GO:0005529 F sugar binding
GO:0016020 C membrane
5199 BGIBMGA005199-TA
8541bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_UPI0000D55CD5 (54%/2918)
Cluster: PREDICTED: similar to CG3921-PA; n=3; Endopterygota|Rep: PREDICTED: similar to CG3921-PA - Tribolium castaneum
GO:0005044 F scavenger receptor activity
GO:0005529 F sugar binding
GO:0016020 C membrane
5200 BGIBMGA005200-TA
1350bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_UPI0000D55F79 (43%/424)
Cluster: PREDICTED: similar to CG11907-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11907-PA, isoform A - Tribolium castaneum
GO:0005337 F nucleoside transmembrane transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0005515 F protein binding
5201 BGIBMGA005201-TA
696bp
 Bomo_Scaf009
chromo12/Bm_scaf119
726203bp
UniRef50_Q8IPV3 (76%/81)
Cluster: CG3164-PA, isoform A; n=9; Endopterygota|Rep: CG3164-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0016887 F ATPase activity
GO:0017111 F nucleoside-triphosphatase activity
GO:0005624 C membrane fraction
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral to plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008203 P cholesterol metabolic process
GO:0009720 P detection of hormone stimulus
GO:0010033 P response to organic substance
GO:0015196 F L-tryptophan transmembrane transporter activity
GO:0015216 F purine nucleotide transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0042626 F ATPase activity, coupled to transmembrane movement of substances
GO:0042632 P cholesterol homeostasis
GO:0046983 F protein dimerization activity
5202 BGIBMGA005202-TA
1863bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_Q8IPV3 (66%/624)
Cluster: CG3164-PA, isoform A; n=9; Endopterygota|Rep: CG3164-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0016887 F ATPase activity
GO:0017111 F nucleoside-triphosphatase activity
5203 BGIBMGA005203-TA
1593bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_UPI0000D55D9F (49%/527)
Cluster: PREDICTED: similar to CG4822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG4822-PA, isoform A - Tribolium castaneum
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0016887 F ATPase activity
GO:0017111 F nucleoside-triphosphatase activity
5204 BGIBMGA005204-TA
750bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_UPI000051A98B (64%/256)
Cluster: PREDICTED: similar to CG15626-PA, isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar to CG15626-PA, isoform A - Apis mellifera
5205 BGIBMGA005205-TA
462bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_Q1HDZ3 (98%/79)
Cluster: Rsf1; n=3; Endopterygota|Rep: Rsf1 - Bombyx mori (Silk moth)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0048025 P negative regulation of nuclear mRNA splicing, via spliceosome
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
5206 BGIBMGA005206-TA
807bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_Q16KL7 (30%/69)
Cluster: Putative uncharacterized protein; n=1; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
GO:0004871 F signal transducer activity
GO:0006935 P chemotaxis
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0000119 C mediator complex
GO:0000723 P telomere maintenance
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006012 P galactose metabolic process
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0006366 P transcription from RNA polymerase II promoter
GO:0016455 F RNA polymerase II transcription mediator activity
GO:0016563 F transcription activator activity
GO:0045941 P positive regulation of transcription
5207 BGIBMGA005207-TA
1506bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_Q9VMR6 (45%/499)
Cluster: CG12512-PA; n=2; Diptera|Rep: CG12512-PA - Drosophila melanogaster (Fruit fly)
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0016874 F ligase activity
GO:0004467 F long-chain-fatty-acid-CoA ligase activity
5208 BGIBMGA005208-TA
888bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_UPI0000D57162 (41%/309)
Cluster: PREDICTED: similar to short-chain dehydrogenase/reductase 1; n=8; Tribolium castaneum|Rep: PREDICTED: similar to short-chain dehydrogenase/reductase 1 - Tribolium castaneum
GO:0004745 F retinol dehydrogenase activity
GO:0005622 C intracellular
GO:0005783 C endoplasmic reticulum
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016491 F oxidoreductase activity
GO:0042572 P retinol metabolic process
GO:0005515 F protein binding
5209 BGIBMGA005209-TA
204bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_A7I215 (33%/53)
Cluster: Replicative DNA helicase; n=1; Campylobacter hominis ATCC BAA-381|Rep: Replicative DNA helicase - Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 /CH001A)
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006260 P DNA replication
GO:0016787 F hydrolase activity
GO:0003824 F catalytic activity
GO:0004559 F alpha-mannosidase activity
GO:0005975 P carbohydrate metabolic process
GO:0006013 P mannose metabolic process
GO:0015923 F mannosidase activity
GO:0030246 F carbohydrate binding
5210 BGIBMGA005210-TA
1395bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_UPI0000D55A0F (36%/400)
Cluster: PREDICTED: similar to CG12058-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG12058-PA - Tribolium castaneum
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006396 P RNA processing
GO:0030529 C ribonucleoprotein complex
5211 BGIBMGA005211-TA
1254bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_UPI0000D55DBB (58%/48)
Cluster: PREDICTED: similar to CG4648-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG4648-PA - Tribolium castaneum
5212 BGIBMGA005212-TA
1110bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_Q9VPK5 (34%/64)
Cluster: CG4648-PA; n=3; Sophophora|Rep: CG4648-PA - Drosophila melanogaster (Fruit fly)
5213 BGIBMGA005213-TA
318bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_UPI0000D55CCD (70%/103)
Cluster: PREDICTED: similar to CG2931-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG2931-PA - Tribolium castaneum
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
5214 BGIBMGA005214-TA
1218bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_UPI00015B577A (44%/359)
Cluster: PREDICTED: similar to GM03282p; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to GM03282p - Nasonia vitripennis
GO:0016246 P RNA interference
5215 BGIBMGA005215-TA
918bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_UPI0000DB79AA (56%/191)
Cluster: PREDICTED: similar to testis-specific gene A2; n=2; Apocrita|Rep: PREDICTED: similar to testis-specific gene A2 - Apis mellifera
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007126 P meiosis
5216 BGIBMGA005216-TA
678bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_Q9VQZ0 (65%/224)
Cluster: CG3652-PA; n=10; Coelomata|Rep: CG3652-PA - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0009792 P embryonic development ending in birth or egg hatching
5217 BGIBMGA005217-TA
306bp
 Bomo_Chr12
chromo12/Bm_scaf119
726203bp
UniRef50_UPI00015B5B99 (40%/101)
Cluster: PREDICTED: hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical protein - Nasonia vitripennis
5218 BGIBMGA005218-TA
318bp
 Bomo_Chr12
chromo12/Bm_scaf110
1013275bp
UniRef50_UPI0000DB743C (49%/87)
Cluster: PREDICTED: similar to beaten path Ia CG4846-PA, partial; n=1; Apis mellifera|Rep: PREDICTED: similar to beaten path Ia CG4846-PA, partial - Apis mellifera
GO:0001746 P Bolwig's organ morphogenesis
GO:0005515 F protein binding
GO:0007415 P defasciculation of motor neuron axon
GO:0016198 P axon choice point recognition
5219 BGIBMGA005219-TA
162bp
 Bomo_Chr12
chromo12/Bm_scaf110
1013275bp
(no hit)
5220 BGIBMGA005220-TA
597bp
 Bomo_Chr12
chromo12/Bm_scaf110
1013275bp
UniRef50_Q7Q3X2 (61%/216)
Cluster: ENSANGP00000011718; n=4; Endopterygota|Rep: ENSANGP00000011718 - Anopheles gambiae str. PEST
GO:0007218 P neuropeptide signaling pathway
GO:0030141 C secretory granule
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