SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA005208-TA
JBrowseBomo_Chr12
chromosome_No.
Scaffold_id
Scaffold Length		chromo12
Bm_scaf119
726203 bp
UniRef
UniRef50_UPI0000D57162 (41%/309)
Cluster: PREDICTED: similar to short-chain dehydrogenase/reductase 1; n=8; Tribolium castaneum|Rep: PREDICTED: similar to short-chain dehydrogenase/reductase 1 - Tribolium castaneum
Ontology
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0008152 P metabolic process
GO:0016020 C membrane
Orthologue
Sequence
(Amino Acid)
MCDQNVSMVGRVVIVTGANSGIGFQTAKDLARRGARVILGCRSVDRGTKARDEIISVTNN
KNVVFKQIDLSSLRSVREFAKDIIETENELHVLINNAGMFSSEKSYTEDGIDTVMQVNYF
GPFLLTRLLLPLLKKSQPSRIVNVSSIFNLFGTINFKDDNHKSFYNGILTYCNSKLCNLI
FTIELSERLRDTGVVVNAVHPGIILTNITNGCSNLLYRVGFAVLCWFNNLTDEDGAQTPL
HLATSDIGGNATGKFFINCSESSLVSPKTRNEVLRKKLWEHSNKLIRFDESSVQL
(295 a.a.)
Sequence
(Nucleotide)
ATGTGCGATCAGAATGTTTCTATGGTCGGCAGAGTTGTTATAGTGACGGGAGCCAATTCG
GGAATTGGTTTTCAGACCGCTAAAGATTTAGCTCGACGGGGCGCCAGAGTGATACTTGGG
TGCAGGAGCGTCGATCGAGGCACCAAAGCCAGAGACGAGATCATATCCGTTACAAACAAC
AAAAACGTTGTGTTCAAACAAATCGATTTATCATCGTTAAGATCTGTGAGGGAGTTCGCG
AAAGATATCATCGAGACGGAGAATGAGCTTCATGTATTGATCAACAACGCGGGAATGTTT
AGCAGCGAGAAGAGCTACACAGAAGACGGAATAGATACGGTGATGCAAGTCAACTATTTT
GGGCCGTTCTTACTGACGCGACTGCTTTTACCGCTGCTAAAAAAATCTCAACCGAGCCGA
ATTGTCAACGTCAGTTCAATATTTAATTTATTCGGTACAATTAATTTTAAGGATGATAAC
CACAAATCTTTCTATAACGGTATTCTCACGTATTGTAACAGCAAGCTGTGCAATTTGATT
TTTACGATAGAATTGTCGGAAAGGCTGCGCGATACGGGCGTTGTCGTTAACGCTGTCCAT
CCCGGTATCATCTTGACTAATATAACGAATGGCTGTTCGAATTTACTGTACAGAGTTGGA
TTCGCTGTCCTCTGTTGGTTCAACAACTTAACAGACGAAGACGGTGCTCAAACTCCGCTC
CATTTAGCGACTAGTGATATAGGAGGGAACGCTACAGGTAAATTCTTTATCAATTGTTCA
GAATCTTCACTCGTGTCTCCAAAAACACGGAATGAAGTTCTCCGAAAGAAATTGTGGGAG
CACTCAAATAAATTAATACGATTCGATGAAAGTTCTGTGCAATTATAA
(888 bp)

- SilkBase 1999-2023 -