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Last updated: 2022/11/18

Search Silkworm GeneModel

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No. Name
Length
 JBrowse Chromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
4531 BGIBMGA004531-TA
192bp
 Bomo_Chr27
chromo27/Bm_scaf97
1382440bp
UniRef50_Q59DP9 (71%/52)
Cluster: Cation-transporting ATPase; n=11; Endopterygota|Rep: Cation-transporting ATPase - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005388 F calcium-transporting ATPase activity
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0006812 P cation transport
GO:0006816 P calcium ion transport
GO:0008152 P metabolic process
GO:0015085 F calcium ion transmembrane transporter activity
GO:0015662 F ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016787 F hydrolase activity
GO:0016820 F hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0000287 F magnesium ion binding
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0006811 P ion transport
GO:0046872 F metal ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007605 P sensory perception of sound
GO:0030182 P neuron differentiation
4532 BGIBMGA004532-TA
333bp
 Bomo_Chr27
chromo27/Bm_scaf97
1382440bp
UniRef50_A1I7W8 (43%/23)
Cluster: Putative uncharacterized protein; n=1; Candidatus Desulfococcus oleovorans Hxd3|Rep: Putative uncharacterized protein - Candidatus Desulfococcus oleovorans Hxd3
GO:0006865 P amino acid transport
GO:0030288 C outer membrane-bounded periplasmic space
GO:0016787 F hydrolase activity
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0006118 P electron transport
GO:0008152 P metabolic process
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660 F FAD binding
4533 BGIBMGA004533-TA
993bp
 Bomo_Chr27
chromo27/Bm_scaf97
1382440bp
UniRef50_Q59DP9 (79%/221)
Cluster: Cation-transporting ATPase; n=11; Endopterygota|Rep: Cation-transporting ATPase - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005388 F calcium-transporting ATPase activity
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0006812 P cation transport
GO:0006816 P calcium ion transport
GO:0008152 P metabolic process
GO:0015085 F calcium ion transmembrane transporter activity
GO:0015662 F ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016787 F hydrolase activity
GO:0016820 F hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0000287 F magnesium ion binding
GO:0005516 F calmodulin binding
GO:0005887 C integral to plasma membrane
GO:0006811 P ion transport
GO:0046872 F metal ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007605 P sensory perception of sound
GO:0030182 P neuron differentiation
4534 BGIBMGA004534-TA
2778bp
 Bomo_Chr27
chromo27/Bm_scaf97
1382440bp
UniRef50_Q16720 (66%/768)
Cluster: Plasma membrane calcium-transporting ATPase 3; n=116; Coelomata|Rep: Plasma membrane calcium-transporting ATPase 3 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0003824 F catalytic activity
GO:0005388 F calcium-transporting ATPase activity
GO:0005509 F calcium ion binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006816 P calcium ion transport
GO:0008152 P metabolic process
GO:0015085 F calcium ion transmembrane transporter activity
GO:0015662 F ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016787 F hydrolase activity
GO:0016820 F hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0046872 F metal ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007605 P sensory perception of sound
GO:0030182 P neuron differentiation
GO:0005887 C integral to plasma membrane
4535 BGIBMGA004535-TA
186bp
 Bomo_Chr27
chromo27/Bm_scaf97
1382440bp
UniRef50_Q6IIW9 (57%/64)
Cluster: HDC16691; n=1; Drosophila melanogaster|Rep: HDC16691 - Drosophila melanogaster (Fruit fly)
GO:0016491 F oxidoreductase activity
GO:0050660 F FAD binding
4536 BGIBMGA004536-TA
2487bp
 Bomo_Chr27
chromo27/Bm_scaf97
1382440bp
UniRef50_Q9VLT3 (52%/312)
Cluster: CG7586-PA; n=6; Endopterygota|Rep: CG7586-PA - Drosophila melanogaster (Fruit fly)
GO:0004866 F endopeptidase inhibitor activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0016020 C membrane
GO:0017114 F wide-spectrum protease inhibitor activity
GO:0048503 F GPI anchor binding
4537 BGIBMGA004537-TA
2928bp
 Bomo_Chr27
chromo27/Bm_scaf97
1382440bp
UniRef50_UPI0000DB6DA7 (54%/222)
Cluster: PREDICTED: similar to Protein tyrosine phosphatase 99A CG2005-PB, isoform B; n=1; Apis mellifera|Rep: PREDICTED: similar to Protein tyrosine phosphatase 99A CG2005-PB, isoform B - Apis mellifera
GO:0004089 F carbonate dehydratase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005887 C integral to plasma membrane
GO:0006470 P protein amino acid dephosphorylation
GO:0006730 P one-carbon compound metabolic process
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphoric monoester hydrolase activity
4538 BGIBMGA004538-TA
1386bp
 Bomo_Chr27
chromo27/Bm_scaf97
1382440bp
UniRef50_Q17LS5 (28%/442)
Cluster: Sugar transporter; n=2; Culicidae|Rep: Sugar transporter - Aedes aegypti (Yellowfever mosquito)
GO:0005215 F transporter activity
GO:0005351 F sugar:hydrogen ion symporter activity
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
4539 BGIBMGA004539-TA
1683bp
 Bomo_Chr27
chromo27/Bm_scaf48
2966211bp
UniRef50_UPI0000D55A50 (50%/244)
Cluster: PREDICTED: similar to CG1021-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG1021-PA, isoform A - Tribolium castaneum
GO:0005515 F protein binding
4540 BGIBMGA004540-TA
534bp
 Bomo_Scaf060
chromo27/Bm_scaf48
2966211bp
UniRef50_Q5MGN8 (77%/173)
Cluster: Heat shock protein 3; n=4; Ditrysia|Rep: Heat shock protein 3 - Lonomia obliqua (Moth)
GO:0006950 P response to stress
GO:0007275 P multicellular organismal development
GO:0042802 F identical protein binding
4541 BGIBMGA004541-TA
546bp
 Bomo_Scaf060
chromo27/Bm_scaf48
2966211bp
UniRef50_Q5MGN8 (77%/176)
Cluster: Heat shock protein 3; n=4; Ditrysia|Rep: Heat shock protein 3 - Lonomia obliqua (Moth)
GO:0006950 P response to stress
GO:0007275 P multicellular organismal development
GO:0042802 F identical protein binding
4542 BGIBMGA004542-TA
999bp
 Bomo_Chr27
chromo27/Bm_scaf48
2966211bp
UniRef50_P04350 (96%/279)
Cluster: Tubulin beta-4 chain; n=4602; root|Rep: Tubulin beta-4 chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein complex
GO:0051258 P protein polymerization
GO:0000212 P meiotic spindle organization and biogenesis
GO:0002119 P larval development (sensu Nematoda)
GO:0005737 C cytoplasm
GO:0007051 P spindle organization and biogenesis
GO:0008150 P biological_process
GO:0009792 P embryonic development ending in birth or egg hatching
GO:0035046 P pronuclear migration
GO:0040016 P embryonic cleavage
4543 BGIBMGA004543-TA
354bp
 Bomo_Chr27
chromo27/Bm_scaf48
2966211bp
UniRef50_O13394 (35%/60)
Cluster: Chitin synthase 5; n=10; Eukaryota|Rep: Chitin synthase 5 - Ustilago maydis (Smut fungus)
GO:0004100 F chitin synthase activity
GO:0007047 P cell wall organization and biogenesis
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016740 F transferase activity
GO:0016757 F transferase activity, transferring glycosyl groups
GO:0016758 F transferase activity, transferring hexosyl groups
GO:0020037 F heme binding
GO:0031410 C cytoplasmic vesicle
GO:0046914 F transition metal ion binding
4544 BGIBMGA004544-TA
687bp
 Bomo_Scaf004
chromo27/Bm_scaf48
2966211bp
UniRef50_O96564 (63%/165)
Cluster: Cubitus interruptus; n=21; Protostomia|Rep: Cubitus interruptus - Junonia coenia (Peacock butterfly) (Precis coenia)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular
GO:0008270 F zinc ion binding
GO:0000122 P negative regulation of transcription from RNA polymerase II promoter
GO:0003677 F DNA binding
GO:0003700 F transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-dependent
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organismal development
GO:0007346 P regulation of progression through mitotic cell cycle
GO:0007350 P blastoderm segmentation
GO:0007367 P segment polarity determination
GO:0008544 P epidermis development
GO:0016020 C membrane
GO:0016563 F transcription activator activity
GO:0016564 F transcription repressor activity
GO:0030707 P ovarian follicle cell development
GO:0035017 P cuticle pattern formation
GO:0035217 P labial disc development
GO:0035224 P genital disc anterior/posterior pattern formation
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0035301 C Hedgehog signaling complex
GO:0045449 P regulation of transcription
GO:0045944 P positive regulation of transcription from RNA polymerase II promoter
GO:0046872 F metal ion binding
GO:0048100 P wing disc anterior/posterior pattern formation
GO:0048592 P eye morphogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0006350 P transcription
4545 BGIBMGA004545-TA
3768bp
 Bomo_Scaf004
chromo27/Bm_scaf48
2966211bp
UniRef50_O96564 (90%/241)
Cluster: Cubitus interruptus; n=21; Protostomia|Rep: Cubitus interruptus - Junonia coenia (Peacock butterfly) (Precis coenia)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular
GO:0008270 F zinc ion binding
4546 BGIBMGA004546-TA
6531bp
 Bomo_Scaf004
chromo27/Bm_scaf48
2966211bp
UniRef50_Q17HV8 (52%/838)
Cluster: Myomesin; n=3; Culicidae|Rep: Myomesin - Aedes aegypti (Yellowfever mosquito)
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein amino acid phosphorylation
GO:0016301 F kinase activity
GO:0016740 F transferase activity
4547 BGIBMGA004547-TA
21291bp
 Bomo_Scaf029
chromo27/Bm_scaf48
2966211bp
UniRef50_Q86GD6 (51%/5827)
Cluster: Projectin; n=1; Procambarus clarkii|Rep: Projectin - Procambarus clarkii (Red swamp crayfish)
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein amino acid phosphorylation
GO:0016301 F kinase activity
GO:0016740 F transferase activity
4548 BGIBMGA004548-TA
1404bp
 Bomo_Scaf008
chromo27/Bm_scaf48
2966211bp
UniRef50_UPI0000D565A1 (37%/88)
Cluster: PREDICTED: similar to CG2102-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG2102-PA - Tribolium castaneum
GO:0005515 F protein binding
GO:0019089 P transmission of virus
4549 BGIBMGA004549-TA
3567bp
 Bomo_Scaf013
chromo27/Bm_scaf48
2966211bp
UniRef50_UPI0000D565A1 (51%/403)
Cluster: PREDICTED: similar to CG2102-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG2102-PA - Tribolium castaneum
4550 BGIBMGA004550-TA
1962bp
 Bomo_Scaf013
chromo27/Bm_scaf48
2966211bp
UniRef50_UPI00003BF9C1 (55%/398)
Cluster: PREDICTED: similar to EPS (human endocytosis) related family member (eps-8); n=2; Apocrita|Rep: PREDICTED: similar to EPS (human endocytosis) related family member (eps-8) - Apis mellifera
GO:0005515 F protein binding
4551 BGIBMGA004551-TA
432bp
 Bomo_Scaf013
chromo27/Bm_scaf48
2966211bp
UniRef50_Q95TJ6 (50%/94)
Cluster: LP01469p; n=2; Sophophora|Rep: LP01469p - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0004872 F receptor activity
GO:0005903 C brush border
4552 BGIBMGA004552-TA
357bp
 Bomo_Scaf090
chromo27/Bm_scaf48
2966211bp
UniRef50_Q4A1C1 (31%/72)
Cluster: Beclin 1; n=1; Saccharomyces castelli|Rep: Beclin 1 - Saccharomyces castelli
GO:0006914 P autophagy
GO:0005488 F binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
4553 BGIBMGA004553-TA
660bp
 Bomo_Chr27
chromo27/Bm_scaf48
2966211bp
UniRef50_A2YBA0 (51%/27)
Cluster: Putative uncharacterized protein; n=6; Oryza sativa|Rep: Putative uncharacterized protein - Oryza sativa subsp. indica (Rice)
GO:0006508 P proteolysis
GO:0008234 F cysteine-type peptidase activity
4554 BGIBMGA004554-TA
1089bp
 Bomo_Chr27
chromo27/Bm_scaf48
2966211bp
UniRef50_UPI0000D578C1 (81%/231)
Cluster: PREDICTED: similar to CG1981-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG1981-PA - Tribolium castaneum
GO:0003690 F double-stranded DNA binding
GO:0005515 F protein binding
GO:0006298 P mismatch repair
GO:0008263 F pyrimidine-specific mismatch base pair DNA N-glycosylase activity
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030983 F mismatched DNA binding
4555 BGIBMGA004555-TA
993bp
 Bomo_Chr27
chromo27/Bm_scaf48
2966211bp
UniRef50_A7EL91 (43%/39)
Cluster: Putative uncharacterized protein; n=1; Sclerotinia sclerotiorum 1980|Rep: Putative uncharacterized protein - Sclerotinia sclerotiorum 1980
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular
GO:0008270 F zinc ion binding
GO:0003677 F DNA binding
GO:0003899 F DNA-directed RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C DNA-directed RNA polymerase II, core complex
GO:0006350 P transcription
GO:0006366 P transcription from RNA polymerase II promoter
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
4556 BGIBMGA004556-TA
900bp
 Bomo_Chr27
chromo27/Bm_scaf48
2966211bp
UniRef50_UPI0000D578C1 (91%/23)
Cluster: PREDICTED: similar to CG1981-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG1981-PA - Tribolium castaneum
GO:0003690 F double-stranded DNA binding
GO:0005515 F protein binding
GO:0006298 P mismatch repair
GO:0008263 F pyrimidine-specific mismatch base pair DNA N-glycosylase activity
4557 BGIBMGA004557-TA
753bp
 Bomo_Chr27
chromo27/Bm_scaf48
2966211bp
UniRef50_Q9V4D9 (77%/207)
Cluster: CG1507-PB, isoform B; n=12; Neoptera|Rep: CG1507-PB, isoform B - Drosophila melanogaster (Fruit fly)
GO:0000784 C nuclear chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003691 F double-stranded telomeric DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F transcription factor activity
GO:0003705 F RNA polymerase II transcription factor activity, enhancer binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005662 C DNA replication factor A complex
GO:0005737 C cytoplasm
GO:0006268 P DNA unwinding during replication
GO:0006270 P DNA replication initiation
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0007399 P nervous system development
GO:0008134 F transcription factor binding
GO:0008284 P positive regulation of cell proliferation
GO:0045892 P negative regulation of transcription, DNA-dependent
GO:0046332 F SMAD binding
4558 BGIBMGA004558-TA
4473bp
 Bomo_Chr27
chromo27/Bm_scaf48
2966211bp
UniRef50_Q9VMJ7 (49%/1322)
Cluster: Histone demethylase lid; n=1; Drosophila melanogaster|Rep: Histone demethylase lid - Drosophila melanogaster (Fruit fly)
GO:0003677 F DNA binding
GO:0005506 F iron ion binding
GO:0005515 F protein binding
GO:0005622 C intracellular
GO:0005634 C nucleus
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0007275 P multicellular organismal development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0016563 F transcription activator activity
GO:0016568 P chromatin modification
GO:0016577 P histone demethylation
GO:0016702 F oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0032453 F histone demethylase activity (H3-K4 specific)
GO:0045941 P positive regulation of transcription
GO:0046872 F metal ion binding
GO:0003700 F transcription factor activity
GO:0006366 P transcription from RNA polymerase II promoter
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
4559 BGIBMGA004559-TA
1368bp
 Bomo_Chr27
chromo27/Bm_scaf48
2966211bp
UniRef50_UPI0000D564CD (29%/441)
Cluster: PREDICTED: similar to CG8234-PA, isoform A; n=2; Tribolium castaneum|Rep: PREDICTED: similar to CG8234-PA, isoform A - Tribolium castaneum
GO:0005215 F transporter activity
GO:0005351 F sugar:hydrogen ion symporter activity
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
4560 BGIBMGA004560-TA
1437bp
 Bomo_Chr27
chromo27/Bm_scaf48
2966211bp
UniRef50_UPI0000D564CD (26%/445)
Cluster: PREDICTED: similar to CG8234-PA, isoform A; n=2; Tribolium castaneum|Rep: PREDICTED: similar to CG8234-PA, isoform A - Tribolium castaneum
GO:0005215 F transporter activity
GO:0005351 F sugar:hydrogen ion symporter activity
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
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