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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA004558-TA
JBrowseBomo_Chr27
chromosome_No.
Scaffold_id
Scaffold Length		chromo27
Bm_scaf48
2966211 bp
UniRef
UniRef50_Q9VMJ7 (49%/1322)
Cluster: Histone demethylase lid; n=1; Drosophila melanogaster|Rep: Histone demethylase lid - Drosophila melanogaster (Fruit fly)
Ontology
GO:0003677 F DNA binding
GO:0005506 F iron ion binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
Orthologue
Sequence
(Amino Acid)
MGKCDEANVEVSMGDSASPMKPDNFTFTPPPEAPVFEPTPEEFLDPLAYISKIRPIAEKS
GICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSTFK
IPTVERKPLDLYSLHKIVKEAGGFEICSAERKWSKIARRMGYPQGKGVGSILKNHYERIL
YPYDVFKNNGAVGDNKETKIEVKSEQTPEKATATRSRSTTKCPPGAAATPPPARRYKSEP
EPAAEGSHTEGALVGSEDSIMKTPIKEENPEIRRTSPRENKWMSAGASCGSRARVTRSTR
LREHRVNNMTVSVTPAPPAPNTHPDDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCL
VPPLADVPKGDWRCPVCLAEEVSKPTEAFGFEQATREYTLQQFGEMADQFKSDYFNMPVH
MVPTSTVEKEFWRIVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYADSSWN
LNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWY
GVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRMDQHAGEFVI
TFPRAYHAGFNQGYNFAEAVNFTPADWLKVGRECIAHYSTLRRYCVFSHDELVCKMALEA
DSLSLSVALAAYRDMRTMLHDERKLRKGLLDWGVTEAEREAFELLPDDERQCHMCKTTCF
LSCVTCRCTPAVACLRHYVELCNCSPQAHRLRYRYTLDELPAMLEKLKKKSEQFREWAEA
VQNALDPDTPKTCDLDGLRAHLKKAHELKIHKTELVRALETAIEDAEKCASVIQQLDLNK
MRTRTRHHDPKYRLTIHELTLFAAEIDGLACVLPEGSAVKEVLRQTSEFESKASELINKD
LDKIEPGYVRELEEVVDLGSRLCIVLPQLAPLQARLQQVKFVDEVQQYRDECSTLTPEVI
DRLLQDAEKLVPHRRVELERAGLYKLKALVEEWEERARAVLIDTTKSKDSSEADEPQYTT
LAELSLLLADGDEIEAALPSYHALQTAVAHAKDWLAKVEEMQSKDLYPYMHSVESVVRRG
QQIPLALYEKDQLAAALQSAKEWKRGAAEMFLKKNWPYSLLEALSPRTEGAESLSTARRR
ARAAVGTEPPPSTLEAGLFLRNFSEDSTPTEIVAAFKQAEITELNSIKTLRARNMRKEVR
APPAAGVTFCVCQKRQYGVMTQCELCKDWFHASCISSMKDEREESPDRGEGAPFSGAESK
FLCPDCMRTKRPRLDRILGLLVWLQKLPVRLAEGEALQCVTERAMSWQDSARALLAALPH
RADMTNREKADKLNAELKKATGRAHDLHNAHNPRSSASVEHAYSATPRSPSARMAPGMLH
KLEELMLEGDLLEVRLEEQAQVWSAVWCARAADGRKATRVLDAGRRKRQRQQRHHHQLKR
TRTRHHHGKVDWVQCDGGCDQWFHMHCVGLSRGALRDDDDYVCGTCADAR
(1490 a.a.)
Sequence
(Nucleotide)
ATGGGAAAATGTGACGAAGCTAATGTCGAAGTTAGCATGGGGGACTCAGCGTCCCCCATG
AAACCTGATAACTTTACGTTTACTCCACCTCCAGAGGCTCCTGTCTTTGAGCCTACACCA
GAAGAGTTTTTGGACCCTTTAGCGTACATCAGTAAAATACGTCCTATCGCCGAGAAATCG
GGCATTTGCAAGATAAAACCACCAGCGCACTGGCAACCCCCATTCGCAGTTGATGTGGAC
CGACTACGGTTTACACCGCGAATACAACGGTTAAATGAGCTCGAGGCAATAACGAGGGTG
AAGCTTAACTTCTTAGACCAGATTATAAAGTTTTGGGAACTGCAAGGGTCAACGTTCAAG
ATTCCGACTGTCGAAAGGAAACCGCTCGATCTCTATTCGTTGCATAAGATTGTGAAAGAA
GCCGGTGGCTTCGAAATATGTTCAGCAGAGAGGAAATGGTCGAAGATAGCCCGCCGCATG
GGCTACCCGCAAGGCAAAGGCGTCGGTTCAATATTGAAGAATCACTACGAACGCATCCTG
TATCCTTATGACGTGTTCAAGAACAATGGAGCAGTCGGAGACAATAAGGAGACAAAAATC
GAAGTCAAATCAGAACAGACCCCCGAGAAGGCAACGGCGACACGCAGTCGTTCAACGACC
AAATGTCCCCCCGGGGCCGCGGCCACCCCGCCTCCCGCCCGTCGGTACAAGTCCGAGCCC
GAGCCGGCAGCTGAAGGTAGTCACACCGAAGGCGCCCTCGTCGGATCTGAAGATTCGATT
ATGAAAACTCCCATTAAAGAGGAGAACCCCGAAATAAGACGGACAAGTCCTCGTGAGAAC
AAATGGATGTCGGCGGGAGCCAGTTGCGGTTCGCGAGCGCGCGTGACCCGCTCCACCCGT
CTCCGCGAGCATCGCGTCAACAACATGACGGTCTCCGTGACGCCTGCCCCGCCCGCACCC
AACACGCATCCCGATGATCCGTTGGCGAAGTATATGTGTCACGTGTGCGGCCGGGGCGAC
GTCGAGGAGCAGATGCTGCTGTGCGACGGCTGCGACGACTCGTACCACACGTTCTGTCTC
GTGCCGCCGCTCGCGGACGTGCCCAAGGGCGACTGGAGGTGTCCAGTGTGCTTAGCCGAA
GAGGTATCGAAGCCGACTGAAGCTTTTGGTTTCGAGCAGGCCACCCGCGAGTACACGCTG
CAACAGTTCGGCGAGATGGCGGATCAGTTTAAATCAGATTACTTCAACATGCCCGTGCAC
ATGGTTCCAACGTCGACTGTGGAAAAGGAATTTTGGCGCATCGTATCGTCGATAGACGAA
GACGTCACGGTCGAGTACGGAGCGGACCTTCACTCGATGGACCACGGCTCGGGGTTCCCG
ACCAAGTCCAGCGCTCACCTGTACCCTGGGGAGCAGCAGTACGCAGACTCCAGCTGGAAC
TTGAACAATCTACCGGTTCTGGAGGGTTCCGTGCTGGGACATATCAACGCTGATATATCA
GGAATGAAGATACCTTGGCTGTACGTGGGCATGTGCTTCGCAACGTTCTGTTGGCACAAC
GAGGACCACTGGAGCTACTCCATCAATTATTTACATTGGGGAGAACCTAAGACATGGTAC
GGAGTGCCAAGTTCAAAGGCCGAGCAATTTGAAGCCGCAATGAAGGCGGAAGCTCCAGAG
CTGTTCCAGCTGCAACCGGACCTGCTGCACCAGCTTGTCACGATCATGAACCCTAATGTG
CTGATGAAAGCTGGTGTTCCCGTTTACAGAATGGATCAGCACGCTGGAGAATTCGTGATT
ACGTTTCCTCGCGCTTATCATGCCGGCTTCAACCAAGGCTATAATTTTGCCGAAGCGGTC
AACTTTACACCAGCTGATTGGTTGAAAGTGGGCCGCGAATGCATCGCGCACTACTCCACG
TTGCGGCGCTACTGCGTGTTCTCGCACGACGAGCTGGTCTGCAAGATGGCGCTGGAGGCC
GACTCGCTCAGCCTCAGCGTCGCGCTGGCCGCCTACCGGGACATGCGCACCATGCTGCAC
GACGAACGGAAACTCCGGAAGGGACTGCTGGATTGGGGTGTAACGGAAGCGGAACGCGAG
GCCTTCGAGCTGCTACCAGACGATGAGCGGCAATGTCACATGTGCAAGACGACGTGCTTT
CTGTCGTGCGTGACGTGTCGCTGCACGCCCGCCGTCGCCTGCCTGCGACACTACGTCGAG
CTGTGCAACTGCAGCCCGCAGGCGCACAGGCTCAGATACCGTTACACCTTAGATGAATTG
CCAGCGATGCTGGAGAAACTAAAGAAGAAATCGGAACAGTTCAGGGAGTGGGCTGAAGCT
GTGCAGAATGCTCTAGATCCAGATACGCCTAAGACTTGTGATTTAGACGGACTGAGGGCG
CATTTGAAGAAAGCTCACGAACTTAAGATTCACAAGACCGAGCTAGTTCGTGCTTTAGAA
ACGGCTATAGAAGACGCCGAAAAGTGTGCTTCGGTAATACAGCAACTGGACTTGAACAAG
ATGCGGACTCGAACCCGACACCACGACCCCAAATACAGGCTGACCATACACGAGCTCACT
TTGTTCGCGGCAGAAATTGACGGCCTCGCTTGTGTTTTGCCCGAAGGCTCGGCTGTCAAA
GAAGTCTTACGTCAAACGTCAGAGTTTGAGTCGAAAGCATCGGAATTGATCAACAAAGAC
CTGGACAAGATTGAACCTGGCTACGTTAGGGAATTAGAAGAGGTTGTAGATTTAGGATCT
CGGCTCTGTATAGTGCTGCCGCAGCTGGCGCCCCTGCAGGCGCGGCTCCAGCAAGTGAAG
TTTGTCGATGAAGTGCAGCAATACAGGGACGAGTGCTCCACCCTCACTCCGGAGGTCATC
GACCGGCTGTTGCAAGATGCCGAAAAACTTGTACCTCATCGCAGGGTTGAACTGGAGAGG
GCTGGACTATACAAGTTGAAAGCCCTAGTAGAAGAATGGGAGGAACGCGCCCGAGCTGTC
CTCATAGATACAACAAAGTCGAAAGATTCGTCGGAAGCGGACGAGCCGCAGTACACGACC
CTGGCCGAGCTGAGTCTGCTGCTCGCCGACGGTGATGAGATCGAGGCGGCCCTGCCCTCG
TACCACGCGCTGCAGACCGCCGTGGCTCACGCAAAGGACTGGCTGGCCAAGGTTGAAGAG
ATGCAATCCAAAGATCTGTACCCGTACATGCACAGCGTGGAGTCTGTTGTGCGCCGCGGG
CAACAGATCCCGCTGGCGCTGTACGAGAAAGATCAGTTGGCGGCCGCCCTACAGTCTGCC
AAGGAATGGAAACGTGGTGCGGCCGAAATGTTTCTAAAAAAGAATTGGCCATATTCGTTA
CTGGAAGCCCTGTCGCCAAGGACTGAAGGAGCCGAGAGCTTATCAACAGCGCGGCGCCGG
GCGCGAGCCGCCGTCGGAACCGAACCGCCTCCCTCGACGTTAGAGGCCGGCCTATTCCTG
AGGAACTTCAGCGAAGACTCCACCCCCACAGAAATCGTAGCGGCGTTCAAACAAGCGGAG
ATTACTGAACTCAATTCAATAAAAACTTTAAGAGCCCGTAACATGAGGAAGGAAGTCCGG
GCCCCACCCGCGGCAGGCGTCACGTTTTGCGTCTGCCAGAAACGGCAATATGGTGTCATG
ACCCAGTGTGAGCTGTGCAAGGATTGGTTCCATGCTTCATGCATATCATCGATGAAGGAC
GAGCGGGAGGAGTCGCCGGACCGCGGGGAGGGCGCTCCGTTTTCGGGAGCCGAAAGTAAA
TTTCTGTGCCCGGACTGTATGAGGACCAAACGGCCCAGGCTGGACCGGATCTTGGGGCTA
CTGGTGTGGCTGCAGAAGCTGCCGGTCCGGCTGGCGGAGGGCGAGGCGCTGCAGTGCGTG
ACGGAGCGCGCCATGTCGTGGCAGGACAGCGCGCGGGCGCTGCTGGCCGCCCTGCCGCAC
CGCGCTGACATGACGAACAGAGAAAAGGCAGATAAACTGAATGCTGAGTTAAAGAAGGCA
ACAGGAAGAGCTCATGATCTCCATAATGCGCATAATCCAAGGTCGTCGGCCAGCGTGGAG
CACGCGTACAGCGCCACGCCGCGGTCGCCCAGCGCGAGGATGGCGCCCGGCATGCTGCAC
AAGCTGGAGGAACTCATGCTCGAAGGCGACCTCTTGGAGGTGCGGCTAGAGGAGCAGGCG
CAGGTGTGGTCGGCGGTGTGGTGCGCGCGCGCCGCCGACGGACGCAAGGCCACGCGCGTG
CTCGACGCCGGCCGGCGGAAGCGGCAGCGGCAGCAGCGACACCACCACCAGCTCAAGAGG
ACCAGGACCAGGCATCACCACGGTAAAGTGGATTGGGTGCAGTGCGACGGTGGGTGCGAC
CAGTGGTTCCACATGCACTGCGTCGGGCTCAGCCGCGGCGCGCTGCGCGACGACGACGAC
TACGTGTGCGGCACGTGCGCCGACGCGCGCTAG
(4473 bp)

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