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Last updated: 2022/11/18

Search Silkworm GeneModel

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No. Name
Length
 JBrowse Chromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
3421 BGIBMGA003421-TA
1395bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_UPI0000D55D00 (43%/465)
Cluster: PREDICTED: similar to CG6751-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG6751-PA - Tribolium castaneum
GO:0005634 C nucleus
GO:0006350 P transcription
3422 BGIBMGA003422-TA
225bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_Q9W380 (37%/74)
Cluster: CG9034-PA; n=5; Endopterygota|Rep: CG9034-PA - Drosophila melanogaster (Fruit fly)
3423 BGIBMGA003423-TA
1575bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_UPI0000D5659A (28%/235)
Cluster: PREDICTED: similar to CG31716-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG31716-PA, isoform A - Tribolium castaneum
GO:0003677 F DNA binding
GO:0003700 F transcription factor activity
GO:0005634 C nucleus
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0016740 F transferase activity
3424 BGIBMGA003424-TA
159bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_UPI000051A1EA (78%/51)
Cluster: PREDICTED: similar to Cdep CG31536-PA, isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar to Cdep CG31536-PA, isoform A - Apis mellifera
GO:0005089 F Rho guanyl-nucleotide exchange factor activity
GO:0005488 F binding
GO:0005622 C intracellular
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0008092 F cytoskeletal protein binding
GO:0019898 C extrinsic to membrane
GO:0035023 P regulation of Rho protein signal transduction
3425 BGIBMGA003425-TA
1539bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_UPI000051A1EA (44%/267)
Cluster: PREDICTED: similar to Cdep CG31536-PA, isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar to Cdep CG31536-PA, isoform A - Apis mellifera
GO:0005089 F Rho guanyl-nucleotide exchange factor activity
GO:0005488 F binding
GO:0005622 C intracellular
GO:0005856 C cytoskeleton
GO:0035023 P regulation of Rho protein signal transduction
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0008092 F cytoskeletal protein binding
GO:0016322 P neuron remodeling
GO:0016601 P Rac protein signal transduction
GO:0019898 C extrinsic to membrane
3426 BGIBMGA003426-TA
429bp
 Bomo_Scaf035
chromo15/Bm_scaf42
3822572bp
UniRef50_UPI00015B586A (31%/79)
Cluster: PREDICTED: similar to TRPgamma cation channel; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to TRPgamma cation channel - Nasonia vitripennis
GO:0003723 F RNA binding
GO:0005488 F binding
3427 BGIBMGA003427-TA
276bp
 Bomo_Chr14
chromo15/Bm_scaf42
3822572bp
UniRef50_Q28MX9 (38%/34)
Cluster: Putative uncharacterized protein; n=1; Jannaschia sp. CCS1|Rep: Putative uncharacterized protein - Jannaschia sp. (strain CCS1)
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975 P carbohydrate metabolic process
3428 BGIBMGA003428-TA
2124bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_P46977 (73%/694)
Cluster: Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A; n=53; Eukaryota|Rep: Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A - Homo sapiens (Human)
GO:0004579 F dolichyl-diphosphooligosaccharide-protein glycotransferase activity
GO:0004576 F oligosaccharyl transferase activity
GO:0005624 C membrane fraction
GO:0005783 C endoplasmic reticulum
GO:0006486 P protein amino acid glycosylation
GO:0008250 C oligosaccharyl transferase complex
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016740 F transferase activity
GO:0018279 P protein amino acid N-linked glycosylation via asparagine
GO:0000003 P reproduction
GO:0002119 P larval development (sensu Nematoda)
GO:0007626 P locomotory behavior
GO:0009792 P embryonic development ending in birth or egg hatching
GO:0040007 P growth
GO:0040015 P negative regulation of body size
3429 BGIBMGA003429-TA
2439bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_Q9BUQ8 (72%/592)
Cluster: Probable ATP-dependent RNA helicase DDX23; n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase DDX23 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0000360 P cis assembly of U2-type pre-catalytic spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F ATP-dependent RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosome
GO:0005682 C snRNP U5
GO:0006397 P mRNA processing
GO:0008026 F ATP-dependent helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0031202 F RNA splicing factor activity, transesterification mechanism
GO:0008150 P biological_process
GO:0009792 P embryonic development ending in birth or egg hatching
GO:0005737 C cytoplasm
GO:0003723 F RNA binding
3430 BGIBMGA003430-TA
237bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_A0NHD6 (52%/46)
Cluster: ENSANGP00000030602; n=2; Culicidae|Rep: ENSANGP00000030602 - Anopheles gambiae str. PEST
GO:0004862 F cAMP-dependent protein kinase inhibitor activity
GO:0006469 P negative regulation of protein kinase activity
GO:0004860 F protein kinase inhibitor activity
3431 BGIBMGA003431-TA
972bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_UPI0000DB7D01 (39%/287)
Cluster: PREDICTED: similar to Wiskott-Aldrich syndrome (eczema-thrombocytopenia); n=1; Apis mellifera|Rep: PREDICTED: similar to Wiskott-Aldrich syndrome (eczema-thrombocytopenia) - Apis mellifera
3432 BGIBMGA003432-TA
354bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_UPI00015B4302 (46%/47)
Cluster: PREDICTED: similar to Wiskott-Aldrich syndrome; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to Wiskott-Aldrich syndrome - Nasonia vitripennis
GO:0005198 F structural molecule activity
GO:0007155 P cell adhesion
GO:0015629 C actin cytoskeleton
GO:0005083 F small GTPase regulator activity
GO:0005515 F protein binding
GO:0005938 C cell cortex
GO:0006461 P protein complex assembly
GO:0008154 P actin polymerization and/or depolymerization
GO:0003779 F actin binding
3433 BGIBMGA003433-TA
978bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_UPI000051A4A5 (32%/228)
Cluster: PREDICTED: similar to CG6678-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to CG6678-PA - Apis mellifera
GO:0016853 F isomerase activity
GO:0047750 F cholestenol delta-isomerase activity
3434 BGIBMGA003434-TA
966bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_UPI00015B570B (25%/102)
Cluster: PREDICTED: hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical protein - Nasonia vitripennis
GO:0005737 C cytoplasm
GO:0006479 P protein amino acid methylation
GO:0008276 F protein methyltransferase activity
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
3435 BGIBMGA003435-TA
1224bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_UPI0000D56165 (27%/227)
Cluster: PREDICTED: similar to CG1965-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG1965-PA - Tribolium castaneum
GO:0003677 F DNA binding
GO:0003700 F transcription factor activity
GO:0005634 C nucleus
GO:0045449 P regulation of transcription
GO:0005515 F protein binding
3436 BGIBMGA003436-TA
1269bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_UPI0000D56165 (46%/41)
Cluster: PREDICTED: similar to CG1965-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG1965-PA - Tribolium castaneum
GO:0003677 F DNA binding
GO:0003700 F transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0045449 P regulation of transcription
GO:0005515 F protein binding
3437 BGIBMGA003437-TA
3390bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_Q4V6S8 (46%/465)
Cluster: IP12458p; n=14; Endopterygota|Rep: IP12458p - Drosophila melanogaster (Fruit fly)
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016021 C integral to membrane
3438 BGIBMGA003438-TA
1482bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_UPI00015B476D (40%/491)
Cluster: PREDICTED: similar to kelch repeat protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to kelch repeat protein - Nasonia vitripennis
GO:0005515 F protein binding
3439 BGIBMGA003439-TA
549bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_UPI0000DB7456 (46%/181)
Cluster: PREDICTED: similar to GS1-like CG15441-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to GS1-like CG15441-PA - Apis mellifera
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0008967 F phosphoglycolate phosphatase activity
3440 BGIBMGA003440-TA
1518bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_Q9VV59 (56%/485)
Cluster: CG4573-PA; n=6; Endopterygota|Rep: CG4573-PA - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004818 F glutamate-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006424 P glutamyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0017101 C aminoacyl-tRNA synthetase multienzyme complex
GO:0005739 C mitochondrion
3441 BGIBMGA003441-TA
255bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_Q9VAX7 (90%/64)
Cluster: CG4869-PA; n=8; Eukaryota|Rep: CG4869-PA - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005525 F GTP binding
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein complex
GO:0051258 P protein polymerization
GO:0005200 F structural constituent of cytoskeleton
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0000212 P meiotic spindle organization and biogenesis
GO:0002119 P larval development (sensu Nematoda)
GO:0005737 C cytoplasm
GO:0007051 P spindle organization and biogenesis
GO:0008150 P biological_process
GO:0009792 P embryonic development ending in birth or egg hatching
GO:0035046 P pronuclear migration
GO:0040016 P embryonic cleavage
3442 BGIBMGA003442-TA
1320bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_P04350 (91%/418)
Cluster: Tubulin beta-4 chain; n=4602; root|Rep: Tubulin beta-4 chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein complex
GO:0051258 P protein polymerization
GO:0000212 P meiotic spindle organization and biogenesis
GO:0002119 P larval development (sensu Nematoda)
GO:0005737 C cytoplasm
GO:0007051 P spindle organization and biogenesis
GO:0008150 P biological_process
GO:0009792 P embryonic development ending in birth or egg hatching
GO:0035046 P pronuclear migration
GO:0040016 P embryonic cleavage
3443 BGIBMGA003443-TA
3423bp
 Bomo_Chr15
chromo15/Bm_scaf42
3822572bp
UniRef50_Q9GTU6 (27%/339)
Cluster: BRCT-domain protein MUS101; n=10; Sophophora|Rep: BRCT-domain protein MUS101 - Drosophila melanogaster (Fruit fly)
GO:0005622 C intracellular
GO:0007067 P mitosis
3444 BGIBMGA003444-TA
333bp
 Bomo_Chr5
chromo5/Bm_scaf9
8107424bp
UniRef50_Q8ESN1 (37%/54)
Cluster: Sensor protein; n=1; Oceanobacillus iheyensis|Rep: Sensor protein - Oceanobacillus iheyensis
GO:0000155 F two-component sensor activity
GO:0000160 P two-component signal transduction system (phosphorelay)
GO:0004673 F protein histidine kinase activity
GO:0004871 F signal transducer activity
GO:0005524 F ATP binding
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016772 F transferase activity, transferring phosphorus-containing groups
GO:0018106 P peptidyl-histidine phosphorylation
GO:0000166 F nucleotide binding
GO:0004849 F uridine kinase activity
GO:0009058 P biosynthetic process
GO:0017111 F nucleoside-triphosphatase activity
GO:0006817 P phosphate transport
GO:0015321 F sodium-dependent phosphate transmembrane transporter activity
GO:0016051 P carbohydrate biosynthetic process
GO:0016758 F transferase activity, transferring hexosyl groups
3445 BGIBMGA003445-TA
552bp
 Bomo_Chr5
chromo5/Bm_scaf9
8107424bp
UniRef50_Q8I5A6 (22%/149)
Cluster: Putative uncharacterized protein; n=1; Plasmodium falciparum 3D7|Rep: Putative uncharacterized protein - Plasmodium falciparum (isolate 3D7)
GO:0005515 F protein binding
3446 BGIBMGA003446-TA
2964bp
 Bomo_Chr5
chromo5/Bm_scaf9
8107424bp
UniRef50_UPI000051A6FB (71%/721)
Cluster: PREDICTED: similar to integrator complex subunit 6; n=1; Apis mellifera|Rep: PREDICTED: similar to integrator complex subunit 6 - Apis mellifera
3447 BGIBMGA003447-TA
768bp
 Bomo_Chr5
chromo5/Bm_scaf9
8107424bp
UniRef50_O75489 (59%/194)
Cluster: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial precursor; n=40; Eukaryota|Rep: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial precursor - Homo sapiens (Human)
GO:0003954 F NADH dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005747 C mitochondrial respiratory chain complex I
GO:0006118 P electron transport
GO:0006120 P mitochondrial electron transport, NADH to ubiquinone
GO:0006800 P oxygen and reactive oxygen species metabolic process
GO:0006917 P induction of apoptosis
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0009055 F electron carrier activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016651 F oxidoreductase activity, acting on NADH or NADPH
GO:0030308 P negative regulation of cell growth
GO:0031966 C mitochondrial membrane
3448 BGIBMGA003448-TA
924bp
 Bomo_Chr5
chromo5/Bm_scaf9
8107424bp
UniRef50_Q9W4R3 (67%/252)
Cluster: CG32791-PA; n=6; Endopterygota|Rep: CG32791-PA - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
3449 BGIBMGA003449-TA
876bp
 Bomo_Chr5
chromo5/Bm_scaf9
8107424bp
UniRef50_UPI0000D57491 (84%/216)
Cluster: PREDICTED: similar to CG32791-PA; n=2; Endopterygota|Rep: PREDICTED: similar to CG32791-PA - Tribolium castaneum
GO:0005515 F protein binding
3450 BGIBMGA003450-TA
474bp
 Bomo_Chr5
chromo5/Bm_scaf9
8107424bp
UniRef50_Q19AB1 (32%/149)
Cluster: C-type lectin; n=2; Obtectomera|Rep: C-type lectin - Helicoverpa armigera (Cotton bollworm) (Heliothis armigera)
GO:0005529 F sugar binding
GO:0005509 F calcium ion binding
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