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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA003429-TA
JBrowseBomo_Chr15
chromosome_No.
Scaffold_id
Scaffold Length		chromo15
Bm_scaf42
3822572 bp
UniRef
UniRef50_Q9BUQ8 (72%/592)
Cluster: Probable ATP-dependent RNA helicase DDX23; n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase DDX23 - Homo sapiens (Human)
Ontology
GO:0000166 F nucleotide binding
GO:0000360 P cis assembly of pre-catalytic spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
Orthologue
Sequence
(Amino Acid)
MARDRSPERRRSRSRDRRDRDRYDERESYREKVKRRDRSKSPKKDADKARSPSRKDRDRS
RSPLRKERGRSRSPKKRDGKDKDRRYEDKEKSRSKKEDEMEEDTADMKKEDESIDKKPIK
KEPLSLEELLAKKKAEEEARSKPVFLTKEQRAQIALEKRRQEVEAIRANTDKPQVTIDLT
GPSRREEDKRHREEREKDREKERREERERKYEERKAYSDRREPKKDNEETSKTKDKEREE
EAIKARYLGIVKKKRRVRRLNDRKFVFDWDASEDTSNDYNVLYKERHQVQFFGRGHIAGI
DIKSQKKDHSKFYGNLLEKRRTELEKEQEKLRLKKVKKKEDKQKWDDRHWSEKDVDEMTE
RDWRIFREDYNITLKGGKIPNPIRSWKEAPLHTDIMDIINKVGYKSPTPIQRQAIPIGLQ
NRDIIGVAETGSGKTLAFLIPLLTWIQSLPKSERMEDADQGPYAIILAPTRELAQQIEEE
TNKFGIPLGITSVVVVGGLSREEQGFKLRLGCEIVIATPGRLIDVLDNRYLVLNRCTYVV
LDEADRMIDMGFEPDVQKILEYMPVSNIKPDSDAAEDASVLLANYNTKKKYRQTVMFTAT
MPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGENEKRRKLTEILQRGVEPPII
IFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRGI
DIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSV
STCPPELMNHPEAQHKPGTVVTKKRREEMIFA
(812 a.a.)
Sequence
(Nucleotide)
ATGGCCCGAGACAGAAGTCCTGAACGGCGGAGGTCAAGATCACGAGATAGAAGAGATCGG
GATCGTTACGATGAACGCGAATCGTATCGTGAAAAAGTAAAGCGCAGGGACAGGTCTAAA
AGCCCTAAAAAAGATGCGGATAAAGCTCGAAGCCCTTCTAGAAAAGATCGCGATCGTTCT
AGGAGTCCACTACGTAAAGAACGCGGTCGTTCGCGCAGCCCTAAGAAACGTGACGGCAAA
GACAAAGATCGACGTTACGAAGACAAGGAAAAGAGTAGATCAAAAAAAGAAGATGAAATG
GAGGAAGACACTGCAGACATGAAGAAAGAGGATGAATCCATAGATAAAAAACCAATTAAA
AAAGAGCCTTTGTCCTTAGAAGAACTACTTGCTAAGAAAAAGGCTGAGGAAGAAGCCCGC
AGTAAGCCAGTATTTCTTACCAAAGAGCAACGAGCACAGATAGCTTTGGAGAAACGGCGT
CAAGAAGTAGAAGCTATAAGAGCTAATACTGATAAGCCTCAAGTCACTATTGATTTAACA
GGTCCGTCAAGACGGGAAGAAGATAAAAGGCACAGAGAAGAACGTGAAAAAGATAGAGAA
AAGGAACGTCGAGAGGAACGGGAAAGGAAATATGAAGAGAGGAAAGCCTATTCAGATCGT
CGAGAACCAAAAAAAGATAATGAAGAGACATCTAAAACAAAAGATAAAGAAAGAGAAGAA
GAGGCTATTAAAGCTCGTTACTTAGGTATAGTAAAGAAAAAGCGTAGAGTAAGACGGCTG
AATGACAGGAAATTTGTTTTTGACTGGGATGCGTCAGAAGATACATCAAATGATTATAAT
GTTTTGTACAAAGAAAGACATCAAGTACAATTCTTTGGTCGTGGACACATTGCTGGTATA
GATATCAAGTCTCAAAAGAAAGACCATAGCAAATTCTATGGGAATCTTTTAGAAAAGCGC
AGAACTGAGTTAGAGAAAGAACAAGAAAAACTACGCTTGAAGAAAGTGAAGAAGAAGGAA
GACAAGCAAAAGTGGGATGATAGACACTGGTCTGAGAAAGATGTGGATGAGATGACAGAG
CGTGATTGGAGGATATTCAGGGAAGACTACAATATTACCTTAAAAGGAGGTAAAATTCCT
AACCCTATACGTTCTTGGAAGGAAGCTCCCTTGCATACTGACATTATGGACATAATCAAC
AAAGTTGGATATAAGAGCCCAACTCCTATTCAAAGGCAGGCTATTCCAATTGGATTACAG
AACCGTGACATTATTGGTGTTGCTGAAACTGGTTCCGGTAAAACATTGGCATTCCTTATA
CCATTACTTACATGGATTCAATCTCTGCCAAAGAGTGAACGTATGGAAGATGCTGACCAA
GGACCTTATGCTATAATTTTAGCTCCAACACGTGAATTGGCTCAACAAATCGAAGAAGAA
ACTAATAAATTTGGTATTCCTCTTGGTATCACATCAGTAGTGGTTGTTGGAGGTTTATCT
CGTGAAGAACAAGGTTTTAAGCTGAGGTTAGGCTGTGAGATTGTCATTGCCACTCCCGGT
CGTCTTATTGATGTCTTAGACAACAGATATTTAGTACTAAACCGTTGTACCTATGTTGTT
CTTGATGAAGCTGATCGGATGATTGATATGGGTTTTGAACCGGATGTTCAAAAAATCCTG
GAATACATGCCTGTATCGAACATAAAACCTGATAGTGATGCAGCTGAAGATGCTTCAGTA
TTGCTTGCCAATTATAACACAAAAAAGAAATACCGACAAACTGTGATGTTTACGGCAACA
ATGCCTCCGGCTGTAGAGCGGCTGGCTAGAAGTTATCTCAGAAGACCGGCTATTGTATAT
ATTGGATCTGTAGGAAAACCAGTAGACAGAACTGAACAAATAGTCTACATGATAGGCGAG
AATGAAAAACGTAGAAAACTTACAGAGATTTTGCAGCGTGGTGTCGAACCACCCATTATT
ATTTTTGTTAACCAGAAAAAAGGTGCAGATGTTCTTGCAAAGGGACTTGAAAAACTTGGT
TTCAATGCCTGTACGCTGCATGGTGGTAAAGGCCAAGAACAACGTGACTTTGCACTTGCC
AGTCTCAAAGGGGGCGCTAAAGATATCCTCGTGGCGACAGACGTGGCAGGTCGTGGTATT
GACATTAAAGATGTCAGTATGGTCATTAATTACGATATGGCGAAGACTATTGAAGACTAC
ACTCATCGTATCGGCCGTACCGGTCGTGCAGGAAAAACTGGTAAAGCTATGTCCTTTGTT
ACAAAAGAAGACTCCGCATTGTTCTATGATCTGAAGCAGGTTTTGTTGGCAAGTTCCGTA
TCTACGTGTCCACCGGAACTTATGAACCACCCTGAGGCTCAACATAAGCCAGGGACAGTC
GTAACAAAGAAGAGACGTGAAGAGATGATATTCGCTTGA
(2439 bp)

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