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Last updated: 2022/11/18

Search Silkworm GeneModel

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No. Name
Length
 JBrowse Chromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
1861 BGIBMGA001861-TA
300bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_Q4Y3V7 (29%/75)
Cluster: Putative uncharacterized protein; n=2; Plasmodium chabaudi|Rep: Putative uncharacterized protein - Plasmodium chabaudi
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006306 P DNA methylation
GO:0006333 P chromatin assembly or disassembly
GO:0003723 F RNA binding
GO:0006396 P RNA processing
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0008026 F ATP-dependent helicase activity
GO:0016787 F hydrolase activity
1862 BGIBMGA001862-TA
285bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
(no hit)
1863 BGIBMGA001863-TA
1284bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI0000DA2C15 (20%/309)
Cluster: PREDICTED: hypothetical protein; n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical protein - Rattus norvegicus
1864 BGIBMGA001864-TA
18846bp
chromo19/Bm_scaf28
4702674bp
UniRef50_Q9VXG9 (85%/119)
Cluster: GH25683p; n=7; Endopterygota|Rep: GH25683p - Drosophila melanogaster (Fruit fly)
GO:0005216 F ion channel activity
GO:0005267 F potassium channel activity
GO:0005783 C endoplasmic reticulum
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0030955 F potassium ion binding
1865 BGIBMGA001865-TA
705bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_Q14376 (56%/219)
Cluster: UDP-glucose 4-epimerase; n=150; cellular organisms|Rep: UDP-glucose 4-epimerase - Homo sapiens (Human)
GO:0003824 F catalytic activity
GO:0003978 F UDP-glucose 4-epimerase activity
GO:0005975 P carbohydrate metabolic process
GO:0006012 P galactose metabolic process
GO:0016853 F isomerase activity
GO:0016857 F racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0044237 P cellular metabolic process
GO:0050662 F coenzyme binding
1866 BGIBMGA001866-TA
3969bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI0000D566C8 (56%/382)
Cluster: PREDICTED: similar to CG9695-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG9695-PA - Tribolium castaneum
1867 BGIBMGA001867-TA
723bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI00015B4B56 (35%/172)
Cluster: PREDICTED: similar to CG17985-PA; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to CG17985-PA - Nasonia vitripennis
GO:0016998 P cell wall catabolic process
GO:0016020 C membrane
GO:0016021 C integral to membrane
1868 BGIBMGA001868-TA
756bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_A0NE32 (60%/140)
Cluster: ENSANGP00000030804; n=4; Endopterygota|Rep: ENSANGP00000030804 - Anopheles gambiae str. PEST
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral to membrane
1869 BGIBMGA001869-TA
11403bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_Q7KVA7 (53%/1878)
Cluster: CG15804-PB, isoform B; n=7; Diptera|Rep: CG15804-PB, isoform B - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0007018 P microtubule-based movement
GO:0016887 F ATPase activity
GO:0017111 F nucleoside-triphosphatase activity
GO:0030286 C dynein complex
GO:0005509 F calcium ion binding
1870 BGIBMGA001870-TA
1860bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_O61646 (60%/288)
Cluster: Splicing factor SRp54; n=8; Endopterygota|Rep: Splicing factor SRp54 - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative nuclear mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0008187 F poly-pyrimidine tract binding
GO:0003723 F RNA binding
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
1871 BGIBMGA001871-TA
705bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_Q9W2I4 (44%/183)
Cluster: CG30390-PA; n=6; Coelomata|Rep: CG30390-PA - Drosophila melanogaster (Fruit fly)
1872 BGIBMGA001872-TA
906bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI0000D566E2 (38%/256)
Cluster: PREDICTED: similar to CG15916-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG15916-PA - Tribolium castaneum
GO:0006364 P rRNA processing
GO:0005515 F protein binding
1873 BGIBMGA001873-TA
255bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_Q16S94 (83%/37)
Cluster: Putative uncharacterized protein; n=1; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
1874 BGIBMGA001874-TA
1152bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_Q16S95 (68%/308)
Cluster: Quinone oxidoreductase; n=5; Endopterygota|Rep: Quinone oxidoreductase - Aedes aegypti (Yellowfever mosquito)
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0008021 C synaptic vesicle
GO:0016021 C integral to membrane
1875 BGIBMGA001875-TA
2064bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_A6R4V5 (26%/583)
Cluster: Putative uncharacterized protein; n=1; Ajellomyces capsulatus NAm1|Rep: Putative uncharacterized protein - Ajellomyces capsulatus NAm1
1876 BGIBMGA001876-TA
3186bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_P81641 (58%/492)
Cluster: Alpha-amylase B precursor; n=325; Neoptera|Rep: Alpha-amylase B precursor - Drosophila melanogaster (Fruit fly)
GO:0003824 F catalytic activity
GO:0004556 F alpha-amylase activity
GO:0005509 F calcium ion binding
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0031404 F chloride ion binding
GO:0043169 F cation binding
GO:0046872 F metal ion binding
1877 BGIBMGA001877-TA
2580bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI0000D57700 (38%/584)
Cluster: PREDICTED: similar to CG12263-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG12263-PA - Tribolium castaneum
GO:0008152 P metabolic process
GO:0009117 P nucleotide metabolic process
GO:0016787 F hydrolase activity
1878 BGIBMGA001878-TA
1512bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI000051A30D (37%/439)
Cluster: PREDICTED: similar to fukutin related protein; n=3; Endopterygota|Rep: PREDICTED: similar to fukutin related protein - Apis mellifera
GO:0005794 C Golgi apparatus
GO:0009101 P glycoprotein biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016485 P protein processing
GO:0016740 F transferase activity
1879 BGIBMGA001879-TA
801bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_Q8IRB5 (30%/68)
Cluster: CG32251-PA; n=2; Drosophila melanogaster|Rep: CG32251-PA - Drosophila melanogaster (Fruit fly)
GO:0003677 F DNA binding
GO:0003700 F transcription factor activity
GO:0005622 C intracellular
GO:0006355 P regulation of transcription, DNA-dependent
GO:0005985 P sucrose metabolic process
GO:0009058 P biosynthetic process
GO:0016740 F transferase activity
GO:0016757 F transferase activity, transferring glycosyl groups
GO:0046524 F sucrose-phosphate synthase activity
1880 BGIBMGA001880-TA
321bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_A7ABY0 (35%/31)
Cluster: Putative uncharacterized protein; n=1; Parabacteroides merdae ATCC 43184|Rep: Putative uncharacterized protein - Parabacteroides merdae ATCC 43184
GO:0004180 F carboxypeptidase activity
GO:0004872 F receptor activity
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
1881 BGIBMGA001881-TA
273bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_Q6WL05 (72%/91)
Cluster: Hyperpolarization-activated ion channel; n=10; Pancrustacea|Rep: Hyperpolarization-activated ion channel - Panulirus argus (Spiny lobster)
GO:0000166 F nucleotide binding
GO:0005216 F ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005952 C cAMP-dependent protein kinase complex
GO:0006468 P protein amino acid phosphorylation
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0008603 F cAMP-dependent protein kinase regulator activity
GO:0016020 C membrane
GO:0016021 C integral to membrane
1882 BGIBMGA001882-TA
1863bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_A1Z9N7 (82%/519)
Cluster: CG8585-PE, isoform E; n=18; Pancrustacea|Rep: CG8585-PE, isoform E - Drosophila melanogaster (Fruit fly)
GO:0005216 F ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0000166 F nucleotide binding
GO:0005952 C cAMP-dependent protein kinase complex
GO:0006468 P protein amino acid phosphorylation
GO:0008603 F cAMP-dependent protein kinase regulator activity
1883 BGIBMGA001883-TA
957bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_A2D8B9 (20%/220)
Cluster: Megakaryocyte stimulating factor, putative; n=1; Trichomonas vaginalis G3|Rep: Megakaryocyte stimulating factor, putative - Trichomonas vaginalis G3
GO:0005618 C cell wall
GO:0008233 F peptidase activity
GO:0009986 C cell surface
1884 BGIBMGA001884-TA
1461bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI0000DB7501 (44%/123)
Cluster: PREDICTED: similar to CG9305-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to CG9305-PA - Apis mellifera
GO:0003677 F DNA binding
GO:0005634 C nucleus
1885 BGIBMGA001885-TA
1479bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI0000D56631 (61%/324)
Cluster: PREDICTED: similar to CG32018-PB, isoform B; n=2; Endopterygota|Rep: PREDICTED: similar to CG32018-PB, isoform B - Tribolium castaneum
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
1886 BGIBMGA001886-TA
1461bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI00015B5F4B (35%/501)
Cluster: PREDICTED: similar to gamma-tubulin complex component 4 (gcp-4); n=1; Nasonia vitripennis|Rep: PREDICTED: similar to gamma-tubulin complex component 4 (gcp-4) - Nasonia vitripennis
GO:0000226 P microtubule cytoskeleton organization and biogenesis
GO:0000922 C spindle pole
GO:0005815 C microtubule organizing center
GO:0005200 F structural constituent of cytoskeleton
GO:0005813 C centrosome
GO:0005874 C microtubule
GO:0006461 P protein complex assembly
GO:0007020 P microtubule nucleation
GO:0008274 C gamma-tubulin ring complex
GO:0015630 C microtubule cytoskeleton
1887 BGIBMGA001887-TA
1866bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI0000D566C5 (27%/573)
Cluster: PREDICTED: similar to CG2072-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG2072-PA - Tribolium castaneum
1888 BGIBMGA001888-TA
522bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
(no hit)
1889 BGIBMGA001889-TA
339bp
 Bomo_Chr25
chromo19/Bm_scaf28
4702674bp
UniRef50_Q4SD04 (36%/96)
Cluster: Chromosome 14 SCAF14646, whole genome shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 14 SCAF14646, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0000166 F nucleotide binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0017111 F nucleoside-triphosphatase activity
1890 BGIBMGA001890-TA
1062bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_Q9VS80 (29%/230)
Cluster: CG8539-PA; n=3; Sophophora|Rep: CG8539-PA - Drosophila melanogaster (Fruit fly)
GO:0004182 F carboxypeptidase A activity
GO:0005515 F protein binding
GO:0006508 P proteolysis
GO:0008270 F zinc ion binding
GO:0004180 F carboxypeptidase activity
GO:0016787 F hydrolase activity
GO:0050425 F carboxypeptidase B activity
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