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Last updated: 2022/11/18

Silkworm GeneModel Entry

NameBGIBMGA001870-TA
JBrowseBomo_Chr19
chromosome_No.
Scaffold_id
Scaffold Length		chromo19
Bm_scaf28
4702674 bp
UniRef
UniRef50_O61646 (60%/288)
Cluster: Splicing factor SRp54; n=8; Endopterygota|Rep: Splicing factor SRp54 - Drosophila melanogaster (Fruit fly)
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0008187 F poly-pyrimidine tract binding
Orthologue
Sequence
(Amino Acid)
MVSGSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYD
SANVNVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMHV
INTLDGIPPNQVIQTHDANLTAAGLPPYPPLPTTYDSRKIEEIRRTVLVADTGSLTSQQL
IDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQVYHATQS
ICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDPVIGLLSKDKRSSRWPVTGLGHVPG
RVADLGLGRVVLAPDTAPSAPPALARGIALAAHALDIDIALGKYNTRLRSRSRHRSSRRS
RSRSRHHSSRSKKERSKDRDRKDRKGSTEKDKEKEKEKREKTKSPPPKAIEKETKEEQKP
EITETNGTSPELKSKASTPPDDKERENEKSEKEKVKEKEKEKSPSKKKERSRSRDKKKER
SRSRRRSRSRSRRKRSRSRKRSRSRERKRTRSRERKRSRSKKRSRSRDRKRSRSRDRKKS
KSRERKRSRSRDRKRSRSHSRRSKSRSHRDSKTPHDNKSRDRTPTLPPLPDKSVPIIEKA
PDINDENTSPDNMDISDSP
(619 a.a.)
Sequence
(Nucleotide)
ATGGTGTCTGGGAGCACGAGGGTGATACAAGTGACCAACATCGCGCCTCAAGCGACTAAA
GACCAGATGCAGACGCTATTCGGCTATTTGGGTAAAATCGACGACATCCGCTTGTATCCA
ACGATCAGAGACGTTTCGTGTCCCGTACAGTCCCGCATCTGTTACGTAAAATATTATGAC
TCTGCAAACGTAAATGTGGCACAGCATATGACTAACACTGTATTCATAGACCGCGCACTG
ATTGTGATACCGGTGCAGTCGGGTGAGATACCAGATGAACACAAAGCGCTCGAAATGTCC
AGTAATGGAACCTTGGTACCGGGGTTAAGTTCTGTAGAACCAAGACTGCCCATGCATGTC
ATCAATACTTTGGATGGAATCCCGCCGAACCAAGTCATTCAAACGCACGACGCTAATTTG
ACAGCAGCTGGTTTGCCTCCATATCCCCCTTTGCCAACCACATATGACTCTAGAAAAATA
GAAGAAATCAGAAGAACAGTCCTAGTGGCTGATACGGGTTCATTAACTTCCCAACAGTTG
ATTGATCACTTCTGCCAGGCAGGTGAAGTGAAGTATATGCGCTTCTGCAGCAGAGATGTT
GACACCCTCAAGTATGCTCTTATTGAGATGACTGAGCAGGAAGCTGTGATCAAAGCATTG
CACCTAAATGGATCCACTTTGGACGGACAAACTATTCAGGTATATCATGCTACGCAATCA
ATATGCAAACCGCAAACAAAAAGCAATGAGGCTGCCCAACGTGAAATAGAAGAAGCTATG
TGCAGAGTGAAGGAAGCACAGAATTTTATATCAGCAGCCATTGATCCTGTCATCGGATTA
CTGTCTAAAGACAAGAGAAGTTCGCGCTGGCCTGTAACAGGACTCGGTCACGTTCCCGGT
CGCGTCGCCGATCTAGGTCTCGGTCGCGTCGTTCTCGCTCCCGACACCGCGCCAAGCGCT
CCTCCCGCTCTCGCTCGCGGCATCGCGCTCGCCGCTCACGCTCTCGACATAGACATCGCA
CTAGGTAAATACAATACCCGCCTGAGGTCTCGTTCCCGACATCGCAGTTCCCGTCGTTCC
CGCTCCCGGTCTCGGCACCACAGCTCGCGTTCGAAGAAGGAACGCTCTAAAGATCGCGAC
CGGAAAGATAGGAAAGGCTCTACAGAAAAAGATAAAGAGAAAGAGAAAGAAAAACGAGAA
AAAACCAAATCACCTCCTCCTAAGGCAATAGAAAAAGAAACGAAAGAAGAACAAAAGCCA
GAAATTACTGAAACGAATGGTACTAGTCCAGAATTAAAGTCGAAGGCTTCCACTCCTCCT
GATGATAAAGAACGGGAGAACGAGAAAAGTGAAAAAGAGAAGGTGAAAGAGAAAGAGAAA
GAAAAGTCTCCATCTAAAAAGAAAGAACGTTCCCGTTCACGGGACAAGAAGAAGGAGCGG
TCGCGGTCGCGACGCAGATCCCGATCCCGCTCCCGTCGTAAACGTTCTAGATCTCGGAAG
CGATCTCGTTCCAGAGAGCGGAAAAGAACGCGCTCCAGAGAAAGAAAGAGATCGAGATCC
AAAAAACGGTCCCGGTCACGAGATCGCAAGAGATCTAGGTCCAGGGACAGAAAGAAGTCT
AAATCTAGAGAAAGGAAGCGGTCTAGGTCGCGTGATCGCAAGCGGTCTCGCTCCCACAGT
CGCCGCTCCAAGAGTCGTTCTCACAGAGATTCCAAAACACCCCACGATAATAAGTCACGC
GACAGAACTCCCACTCTTCCTCCTTTACCGGATAAAAGCGTTCCAATAATTGAGAAGGCT
CCAGATATAAATGATGAAAATACATCTCCAGATAATATGGATATTTCAGATTCTCCTTAG
(1860 bp)

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