SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/104180
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9721 O_BomoIG14988_complete:A_BomoIG_DN32698_c0_g1_i10
1165bp
 probable_serine/threonine-protein_kinase_dyrk2_isoform_X2_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001964 P startle response
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0007350 P blastoderm segmentation
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0007548 P sex differentiation
GO:0007601 P visual perception
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0008407 P chaeta morphogenesis
GO:0009306 P protein secretion
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030717 P oocyte karyosome formation
GO:0031987 P locomotion involved in locomotory behavior
GO:0034125 P negative regulation of MyD88-dependent toll-like receptor signaling pathway
GO:0035071 P salivary gland cell autophagic cell death
GO:0042051 P compound eye photoreceptor development
GO:0045494 P photoreceptor cell maintenance
GO:0046777 P protein autophosphorylation
GO:0048102 P autophagic cell death
GO:0048477 P oogenesis
GO:0048749 P compound eye development
GO:0048854 P brain morphogenesis
GO:0050896 P response to stimulus
GO:2000255 P negative regulation of male germ cell proliferation
9722 O_BomoIG14989_5prime_partial:A_BomoIG_DN32698_c0_g1_i10
637bp
 malate_dehydrogenase_isoform_X3_[Bombyx_mori]
GO:0004470 F malic enzyme activity
GO:0004471 F malate dehydrogenase (decarboxylating) (NAD+) activity
GO:0004473 F malate dehydrogenase (decarboxylating) (NADP+) activity
GO:0005737 C cytoplasm
GO:0006108 P malate metabolic process
GO:0008948 F oxaloacetate decarboxylase activity
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
9723 O_BomoIG1498_complete:A_BomoIG_DN30225_c6_g2_i7
354bp
 transcription_initiation_factor_TFIID_subunit_4_isoform_X5_[Bombyx_mori]
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001092 F TFIIA-class transcription factor complex binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0022008 P neurogenesis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0048813 P dendrite morphogenesis
GO:0051123 P RNA polymerase II preinitiation complex assembly
9724 O_BomoIG14990_complete:A_BomoIG_DN32698_c0_g1_i10
139bp
 dual_specificity_protein_kinase_CLK2_isoform_X6_[Helicoverpa_armigera]
9725 O_BomoIG14991_complete:A_BomoIG_DN32698_c0_g1_i10
130bp
 hypothetical_protein_UUU_20310_[Klebsiella_pneumoniae_subsp._pneumoniae_DSM_30104]
9726 O_BomoIG14992_complete:A_BomoIG_DN32698_c0_g1_i10
119bp
9727 O_BomoIG14993_complete:A_BomoIG_DN32698_c0_g1_i10
115bp
9728 O_BomoIG14994_complete:A_BomoIG_DN32698_c0_g1_i10
105bp
9729 O_BomoIG14995_complete:A_BomoIG_DN32698_c0_g1_i10
101bp
9730 O_BomoIG14996_5prime_partial:A_BomoIG_DN32698_c0_g1_i13
637bp
 malate_dehydrogenase_isoform_X3_[Bombyx_mori]
GO:0004470 F malic enzyme activity
GO:0004471 F malate dehydrogenase (decarboxylating) (NAD+) activity
GO:0004473 F malate dehydrogenase (decarboxylating) (NADP+) activity
GO:0005737 C cytoplasm
GO:0006108 P malate metabolic process
GO:0008948 F oxaloacetate decarboxylase activity
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
9731 O_BomoIG14997_complete:A_BomoIG_DN32698_c0_g1_i13
130bp
 hypothetical_protein_UUU_20310_[Klebsiella_pneumoniae_subsp._pneumoniae_DSM_30104]
9732 O_BomoIG14998_complete:A_BomoIG_DN32698_c0_g1_i13
105bp
9733 O_BomoIG14999_complete:A_BomoIG_DN32698_c0_g1_i14
1165bp
 probable_serine/threonine-protein_kinase_dyrk2_isoform_X2_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001964 P startle response
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0007350 P blastoderm segmentation
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0007548 P sex differentiation
GO:0007601 P visual perception
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0008407 P chaeta morphogenesis
GO:0009306 P protein secretion
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030717 P oocyte karyosome formation
GO:0031987 P locomotion involved in locomotory behavior
GO:0034125 P negative regulation of MyD88-dependent toll-like receptor signaling pathway
GO:0035071 P salivary gland cell autophagic cell death
GO:0042051 P compound eye photoreceptor development
GO:0045494 P photoreceptor cell maintenance
GO:0046777 P protein autophosphorylation
GO:0048102 P autophagic cell death
GO:0048477 P oogenesis
GO:0048749 P compound eye development
GO:0048854 P brain morphogenesis
GO:0050896 P response to stimulus
GO:2000255 P negative regulation of male germ cell proliferation
9734 O_BomoIG1499_complete:A_BomoIG_DN30225_c6_g2_i8
822bp
 transcription_initiation_factor_TFIID_subunit_4_isoform_X6_[Bombyx_mori]
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001092 F TFIIA-class transcription factor complex binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0022008 P neurogenesis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0048813 P dendrite morphogenesis
GO:0051123 P RNA polymerase II preinitiation complex assembly
9735 O_BomoIG149_complete:A_BomoIG_DN30227_c6_g3_i7
225bp
 PREDICTED:_pleckstrin_homology-like_domain_family_B_member_1_[Papilio_polytes]
GO:0000226 P microtubule cytoskeleton organization
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0016020 C membrane
GO:0031252 C cell leading edge
GO:0045111 C intermediate filament cytoskeleton
GO:0045180 C basal cortex
GO:0045184 P establishment of protein localization
GO:0051497 P negative regulation of stress fiber assembly
GO:0051895 P negative regulation of focal adhesion assembly
GO:0070507 P regulation of microtubule cytoskeleton organization
GO:1903690 P negative regulation of wound healing, spreading of epidermal cells
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
9736 O_BomoIG14_complete:A_BomoIG_DN30257_c0_g6_i1
262bp
 Uncharacterized_protein_OBRU01_02105_[Operophtera_brumata]
9737 O_BomoIG15000_5prime_partial:A_BomoIG_DN32698_c0_g1_i14
637bp
 malate_dehydrogenase_isoform_X3_[Bombyx_mori]
GO:0004470 F malic enzyme activity
GO:0004471 F malate dehydrogenase (decarboxylating) (NAD+) activity
GO:0004473 F malate dehydrogenase (decarboxylating) (NADP+) activity
GO:0005737 C cytoplasm
GO:0006108 P malate metabolic process
GO:0008948 F oxaloacetate decarboxylase activity
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
9738 O_BomoIG15001_complete:A_BomoIG_DN32698_c0_g1_i14
130bp
 hypothetical_protein_UUU_20310_[Klebsiella_pneumoniae_subsp._pneumoniae_DSM_30104]
9739 O_BomoIG15002_complete:A_BomoIG_DN32698_c0_g1_i14
119bp
9740 O_BomoIG15003_complete:A_BomoIG_DN32698_c0_g1_i14
115bp
9741 O_BomoIG15004_complete:A_BomoIG_DN32698_c0_g1_i14
105bp
9742 O_BomoIG15005_complete:A_BomoIG_DN32698_c0_g1_i14
101bp
9743 O_BomoIG15006_5prime_partial:A_BomoIG_DN32698_c0_g1_i15
637bp
 malate_dehydrogenase_isoform_X3_[Bombyx_mori]
GO:0004470 F malic enzyme activity
GO:0004471 F malate dehydrogenase (decarboxylating) (NAD+) activity
GO:0004473 F malate dehydrogenase (decarboxylating) (NADP+) activity
GO:0005737 C cytoplasm
GO:0006108 P malate metabolic process
GO:0008948 F oxaloacetate decarboxylase activity
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
9744 O_BomoIG15007_complete:A_BomoIG_DN32698_c0_g1_i15
431bp
 dual_specificity_protein_kinase_CLK2_isoform_X4_[Bombyx_mori]
9745 O_BomoIG15008_complete:A_BomoIG_DN32698_c0_g1_i15
314bp
 probable_serine/threonine-protein_kinase_dyrk2_isoform_X1_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001964 P startle response
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0007350 P blastoderm segmentation
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0007548 P sex differentiation
GO:0007601 P visual perception
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0008407 P chaeta morphogenesis
GO:0009306 P protein secretion
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030717 P oocyte karyosome formation
GO:0031987 P locomotion involved in locomotory behavior
GO:0034125 P negative regulation of MyD88-dependent toll-like receptor signaling pathway
GO:0035071 P salivary gland cell autophagic cell death
GO:0042051 P compound eye photoreceptor development
GO:0045494 P photoreceptor cell maintenance
GO:0046777 P protein autophosphorylation
GO:0048102 P autophagic cell death
GO:0048477 P oogenesis
GO:0048749 P compound eye development
GO:0048854 P brain morphogenesis
GO:0050896 P response to stimulus
GO:2000255 P negative regulation of male germ cell proliferation
9746 O_BomoIG15009_complete:A_BomoIG_DN32698_c0_g1_i15
130bp
 hypothetical_protein_UUU_20310_[Klebsiella_pneumoniae_subsp._pneumoniae_DSM_30104]
9747 O_BomoIG1500_5prime_partial:A_BomoIG_DN30228_c4_g1_i1
331bp
 neuropeptide_receptor_A19_[Bombyx_mori]
GO:0001653 F peptide receptor activity
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0004983 F neuropeptide Y receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007218 P neuropeptide signaling pathway
GO:0008188 F neuropeptide receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
9748 O_BomoIG15010_5prime_partial:A_BomoIG_DN32698_c0_g1_i15
127bp
9749 O_BomoIG15011_complete:A_BomoIG_DN32698_c0_g1_i15
110bp
9750 O_BomoIG15012_complete:A_BomoIG_DN32698_c0_g1_i15
105bp
previous next from show/104180

- SilkBase 1999-2023 -