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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9541 O_BomoIG14825_5prime_partial:A_BomoIG_DN32689_c0_g2_i4
245bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_CG7065_[Bombyx_mori]
9542 O_BomoIG14826_complete:A_BomoIG_DN32688_c4_g3_i2
348bp
 ATP-dependent_RNA_helicase_DDX42_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
9543 O_BomoIG14827_complete:A_BomoIG_DN32688_c4_g3_i2
103bp
9544 O_BomoIG14828_complete:A_BomoIG_DN32688_c4_g3_i3
747bp
 ATP-dependent_RNA_helicase_DDX42_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
9545 O_BomoIG14829_complete:A_BomoIG_DN32688_c4_g3_i3
162bp
 hypothetical_protein_AX774_g2527,_partial_[Zancudomyces_culisetae]
9546 O_BomoIG1482_complete:A_BomoIG_DN30243_c1_g1_i16
1300bp
 dynactin_subunit_1_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0001709 P cell fate determination
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0001754 P eye photoreceptor cell differentiation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005818 C aster
GO:0005828 C kinetochore microtubule
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0005874 C microtubule
GO:0005876 C spindle microtubule
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007349 P cellularization
GO:0008090 P retrograde axonal transport
GO:0010970 P transport along microtubule
GO:0016330 P second mitotic wave involved in compound eye morphogenesis
GO:0022008 P neurogenesis
GO:0030286 C dynein complex
GO:0030496 C midbody
GO:0031616 C spindle pole centrosome
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0035371 C microtubule plus-end
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045502 F dynein complex binding
GO:0047497 P mitochondrion transport along microtubule
GO:0048477 P oogenesis
GO:0048491 P retrograde synaptic vesicle transport
GO:0048675 P axon extension
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051256 P mitotic spindle midzone assembly
GO:0051299 P centrosome separation
GO:0051383 P kinetochore organization
GO:0051642 P centrosome localization
GO:0070840 F dynein complex binding
GO:1904115 C axon cytoplasm
9547 O_BomoIG14830_complete:A_BomoIG_DN32688_c4_g3_i3
103bp
9548 O_BomoIG14831_5prime_partial:A_BomoIG_DN32688_c4_g3_i4
264bp
 ATP-dependent_RNA_helicase_DDX42_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
9549 O_BomoIG14832_complete:A_BomoIG_DN32688_c4_g3_i5
406bp
 ATP-dependent_RNA_helicase_DDX42_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
9550 O_BomoIG14833_complete:A_BomoIG_DN32688_c4_g3_i5
162bp
 hypothetical_protein_AX774_g2527,_partial_[Zancudomyces_culisetae]
9551 O_BomoIG14834_complete:A_BomoIG_DN32688_c4_g13_i1
137bp
9552 O_BomoIG14835_complete:A_BomoIG_DN32688_c4_g3_i7
747bp
 ATP-dependent_RNA_helicase_DDX42_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
9553 O_BomoIG14836_complete:A_BomoIG_DN32688_c4_g3_i7
162bp
 hypothetical_protein_AX774_g2527,_partial_[Zancudomyces_culisetae]
9554 O_BomoIG14837_complete:A_BomoIG_DN32688_c4_g14_i1
168bp
 PREDICTED:_uncharacterized_protein_LOC106141368_[Amyelois_transitella]
9555 O_BomoIG14838_5prime_partial:A_BomoIG_DN32688_c4_g14_i1
119bp
 PREDICTED:_uncharacterized_protein_LOC106141368_[Amyelois_transitella]
9556 O_BomoIG14839_complete:A_BomoIG_DN32688_c4_g15_i1
100bp
9557 O_BomoIG1483_complete:A_BomoIG_DN30243_c1_g1_i16
136bp
9558 O_BomoIG14840_complete:A_BomoIG_DN32648_c5_g1_i1
229bp
 protein_MAK16_homolog_A_[Bombyx_mori]
GO:0000460 P maturation of 5.8S rRNA
GO:0000470 P maturation of LSU-rRNA
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0030687 C preribosome, large subunit precursor
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
9559 O_BomoIG14841_5prime_partial:A_BomoIG_DN32648_c5_g1_i1
132bp
9560 O_BomoIG14842_complete:A_BomoIG_DN32648_c5_g1_i3
128bp
 protein_MAK16_homolog_A_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
9561 O_BomoIG14843_complete:A_BomoIG_DN32648_c5_g4_i1
440bp
 zinc_finger_protein_675_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0072562 C blood microparticle
9562 O_BomoIG14844_complete:A_BomoIG_DN32648_c5_g1_i4
135bp
 protein_MAK16_homolog_A_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
9563 O_BomoIG14845_complete:A_BomoIG_DN32648_c5_g4_i2
568bp
 zinc_finger_protein_675_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
9564 O_BomoIG14846_complete:A_BomoIG_DN32648_c5_g4_i2
132bp
9565 O_BomoIG14847_complete:A_BomoIG_DN32648_c5_g4_i3
132bp
9566 O_BomoIG14848_complete:A_BomoIG_DN32648_c5_g1_i5
131bp
 protein_MAK16_homolog_A_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
9567 O_BomoIG14849_5prime_partial:A_BomoIG_DN32648_c5_g4_i5
367bp
 zinc_finger_protein_675_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
9568 O_BomoIG1484_complete:A_BomoIG_DN30243_c1_g1_i16
102bp
9569 O_BomoIG14850_complete:A_BomoIG_DN32648_c5_g4_i5
132bp
9570 O_BomoIG14851_complete:A_BomoIG_DN32648_c5_g1_i6
299bp
 protein_MAK16_homolog_A_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
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