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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9421 O_BomoIG14717_3prime_partial:A_BomoIG_DN32621_c2_g5_i10
248bp
 myosin_light_chain_kinase,_partial_[Cadra_cautella]
9422 O_BomoIG14718_5prime_partial:A_BomoIG_DN32621_c2_g5_i10
101bp
9423 O_BomoIG14719_complete:A_BomoIG_DN32621_c2_g5_i11
601bp
 putative_myosin_light_chain_kinase_[Danaus_plexippus_plexippus]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0070062 C extracellular exosome
9424 O_BomoIG1471_complete:A_BomoIG_DN30243_c1_g1_i10
100bp
9425 O_BomoIG14720_3prime_partial:A_BomoIG_DN32621_c2_g5_i12
216bp
 myosin_light_chain_kinase,_partial_[Cadra_cautella]
9426 O_BomoIG14721_5prime_partial:A_BomoIG_DN32621_c2_g1_i7
116bp
9427 O_BomoIG14722_3prime_partial:A_BomoIG_DN32665_c2_g1_i1
644bp
 PREDICTED:_probable_cyclin-dependent_serine/threonine-protein_kinase_DDB_G0292550_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030014 C CCR4-NOT complex
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
9428 O_BomoIG14723_complete:A_BomoIG_DN32665_c2_g1_i1
202bp
9429 O_BomoIG14724_complete:A_BomoIG_DN32665_c2_g1_i1
161bp
9430 O_BomoIG14725_complete:A_BomoIG_DN32665_c2_g2_i2
253bp
 DENN_domain-containing_protein_1A_isoform_X4_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0030054 C cell junction
GO:0030136 C clathrin-coated vesicle
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032456 P endocytic recycling
GO:0042734 C presynaptic membrane
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:1901981 F phosphatidylinositol phosphate binding
9431 O_BomoIG14726_complete:A_BomoIG_DN32665_c2_g2_i2
193bp
 DENN_domain-containing_protein_1A_isoform_X3_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017124 F SH3 domain binding
GO:0030054 C cell junction
GO:0030136 C clathrin-coated vesicle
GO:0030425 C dendrite
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032456 P endocytic recycling
GO:0032483 P regulation of Rab protein signal transduction
GO:0042734 C presynaptic membrane
GO:0043025 C neuronal cell body
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0048488 P synaptic vesicle endocytosis
GO:1901981 F phosphatidylinositol phosphate binding
9432 O_BomoIG14727_3prime_partial:A_BomoIG_DN32665_c2_g1_i2
859bp
 PREDICTED:_uncharacterized_protein_LOC106123154_isoform_X1_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030014 C CCR4-NOT complex
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
9433 O_BomoIG14728_complete:A_BomoIG_DN32665_c2_g1_i2
202bp
9434 O_BomoIG14729_complete:A_BomoIG_DN32665_c2_g1_i2
161bp
9435 O_BomoIG1472_5prime_partial:A_BomoIG_DN30243_c1_g1_i11
104bp
 dynactin_subunit_1_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0001709 P cell fate determination
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0001754 P eye photoreceptor cell differentiation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005818 C aster
GO:0005828 C kinetochore microtubule
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0005874 C microtubule
GO:0005876 C spindle microtubule
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007349 P cellularization
GO:0008090 P retrograde axonal transport
GO:0010970 P transport along microtubule
GO:0016330 P second mitotic wave involved in compound eye morphogenesis
GO:0022008 P neurogenesis
GO:0030286 C dynein complex
GO:0030496 C midbody
GO:0031616 C spindle pole centrosome
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0035371 C microtubule plus-end
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045502 F dynein complex binding
GO:0047497 P mitochondrion transport along microtubule
GO:0048477 P oogenesis
GO:0048491 P retrograde synaptic vesicle transport
GO:0048675 P axon extension
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051256 P mitotic spindle midzone assembly
GO:0051299 P centrosome separation
GO:0051383 P kinetochore organization
GO:0051642 P centrosome localization
GO:0070840 F dynein complex binding
GO:1904115 C axon cytoplasm
9436 O_BomoIG14730_complete:A_BomoIG_DN32665_c2_g1_i3
301bp
 CCR4-NOT_transcription_complex_subunit_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030014 C CCR4-NOT complex
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
9437 O_BomoIG14731_complete:A_BomoIG_DN32665_c2_g1_i3
202bp
9438 O_BomoIG14732_internal:A_BomoIG_DN32665_c2_g2_i4
488bp
 DENN_domain-containing_protein_1A_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017124 F SH3 domain binding
GO:0017137 F small GTPase binding
GO:0030054 C cell junction
GO:0030136 C clathrin-coated vesicle
GO:0030425 C dendrite
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032456 P endocytic recycling
GO:0032483 P regulation of Rab protein signal transduction
GO:0042734 C presynaptic membrane
GO:0043025 C neuronal cell body
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0048488 P synaptic vesicle endocytosis
GO:1901981 F phosphatidylinositol phosphate binding
9439 O_BomoIG14733_3prime_partial:A_BomoIG_DN32665_c2_g2_i6
433bp
 DENN_domain-containing_protein_1A_isoform_X3_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017124 F SH3 domain binding
GO:0017137 F small GTPase binding
GO:0030054 C cell junction
GO:0030136 C clathrin-coated vesicle
GO:0030425 C dendrite
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032456 P endocytic recycling
GO:0032483 P regulation of Rab protein signal transduction
GO:0042734 C presynaptic membrane
GO:0043025 C neuronal cell body
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0048488 P synaptic vesicle endocytosis
GO:1901981 F phosphatidylinositol phosphate binding
9440 O_BomoIG14734_complete:A_BomoIG_DN32665_c2_g2_i8
433bp
 DENN_domain-containing_protein_1A_isoform_X3_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017124 F SH3 domain binding
GO:0017137 F small GTPase binding
GO:0030054 C cell junction
GO:0030136 C clathrin-coated vesicle
GO:0030425 C dendrite
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032456 P endocytic recycling
GO:0032483 P regulation of Rab protein signal transduction
GO:0042734 C presynaptic membrane
GO:0043025 C neuronal cell body
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0048488 P synaptic vesicle endocytosis
GO:1901981 F phosphatidylinositol phosphate binding
9441 O_BomoIG14735_3prime_partial:A_BomoIG_DN32665_c2_g1_i4
355bp
 uncharacterized_protein_LOC110385308_[Bombyx_mori]
9442 O_BomoIG14736_complete:A_BomoIG_DN32665_c2_g1_i4
161bp
9443 O_BomoIG14737_5prime_partial:A_BomoIG_DN32665_c2_g2_i9
488bp
 DENN_domain-containing_protein_1A_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0030054 C cell junction
GO:0030136 C clathrin-coated vesicle
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032456 P endocytic recycling
GO:0042734 C presynaptic membrane
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:1901981 F phosphatidylinositol phosphate binding
9444 O_BomoIG14738_complete:A_BomoIG_DN32665_c2_g3_i1
111bp
 protein_dpy-30_homolog_[Bombyx_mori]
GO:0000781 C chromosome, telomeric region
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006348 P subtelomeric heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016197 P endosomal transport
GO:0016568 P chromatin organization
GO:0035097 C histone methyltransferase complex
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044666 C MLL3/4 complex
GO:0048188 C Set1C/COMPASS complex
GO:0051568 P histone H3-K4 methylation
9445 O_BomoIG14739_complete:A_BomoIG_DN32665_c2_g2_i13
433bp
 DENN_domain-containing_protein_1A_isoform_X3_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017124 F SH3 domain binding
GO:0017137 F small GTPase binding
GO:0030054 C cell junction
GO:0030136 C clathrin-coated vesicle
GO:0030425 C dendrite
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032456 P endocytic recycling
GO:0032483 P regulation of Rab protein signal transduction
GO:0042734 C presynaptic membrane
GO:0043025 C neuronal cell body
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0048488 P synaptic vesicle endocytosis
GO:1901981 F phosphatidylinositol phosphate binding
9446 O_BomoIG1473_complete:A_BomoIG_DN30243_c1_g1_i12
112bp
 dynactin_subunit_1_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0001709 P cell fate determination
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0001754 P eye photoreceptor cell differentiation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005818 C aster
GO:0005828 C kinetochore microtubule
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0005874 C microtubule
GO:0005876 C spindle microtubule
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007349 P cellularization
GO:0008090 P retrograde axonal transport
GO:0010970 P transport along microtubule
GO:0016330 P second mitotic wave involved in compound eye morphogenesis
GO:0022008 P neurogenesis
GO:0030286 C dynein complex
GO:0030496 C midbody
GO:0031616 C spindle pole centrosome
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0035371 C microtubule plus-end
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045502 F dynein complex binding
GO:0047497 P mitochondrion transport along microtubule
GO:0048477 P oogenesis
GO:0048491 P retrograde synaptic vesicle transport
GO:0048675 P axon extension
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051256 P mitotic spindle midzone assembly
GO:0051299 P centrosome separation
GO:0051383 P kinetochore organization
GO:0051642 P centrosome localization
GO:0070840 F dynein complex binding
GO:1904115 C axon cytoplasm
9447 O_BomoIG14740_internal:A_BomoIG_DN32665_c2_g1_i5
476bp
 uncharacterized_protein_LOC110385308_[Bombyx_mori]
9448 O_BomoIG14741_3prime_partial:A_BomoIG_DN32665_c2_g1_i6
859bp
 PREDICTED:_uncharacterized_protein_LOC106123154_isoform_X1_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030014 C CCR4-NOT complex
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
9449 O_BomoIG14742_complete:A_BomoIG_DN32665_c2_g1_i6
202bp
9450 O_BomoIG14743_complete:A_BomoIG_DN32665_c2_g1_i6
161bp
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