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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9331 O_BomoIG14636_3prime_partial:A_BomoIG_DN32649_c0_g1_i6
100bp
9332 O_BomoIG14637_complete:A_BomoIG_DN32649_c0_g1_i7
322bp
 transcription_cofactor_vestigial-like_protein_4_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
9333 O_BomoIG14638_complete:A_BomoIG_DN32649_c0_g1_i7
135bp
9334 O_BomoIG14639_complete:A_BomoIG_DN32649_c0_g1_i9
325bp
 transcription_cofactor_vestigial-like_protein_4_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
9335 O_BomoIG1463_complete:A_BomoIG_DN30243_c1_g1_i8
100bp
9336 O_BomoIG14640_complete:A_BomoIG_DN32649_c0_g1_i9
135bp
9337 O_BomoIG14641_3prime_partial:A_BomoIG_DN32649_c0_g4_i4
755bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
9338 O_BomoIG14642_complete:A_BomoIG_DN32649_c0_g4_i4
126bp
9339 O_BomoIG14643_3prime_partial:A_BomoIG_DN32649_c0_g1_i10
125bp
9340 O_BomoIG14644_5prime_partial:A_BomoIG_DN32649_c0_g1_i10
111bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
9341 O_BomoIG14645_complete:A_BomoIG_DN32649_c0_g1_i12
322bp
 transcription_cofactor_vestigial-like_protein_4_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
9342 O_BomoIG14646_complete:A_BomoIG_DN32649_c0_g1_i12
135bp
9343 O_BomoIG14647_5prime_partial:A_BomoIG_DN32649_c0_g1_i13
162bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
9344 O_BomoIG14648_3prime_partial:A_BomoIG_DN32649_c0_g4_i5
815bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
9345 O_BomoIG14649_complete:A_BomoIG_DN32649_c0_g4_i5
126bp
9346 O_BomoIG1464_complete:A_BomoIG_DN30243_c1_g1_i9
1318bp
 dynactin_subunit_1_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0001709 P cell fate determination
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0001754 P eye photoreceptor cell differentiation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005818 C aster
GO:0005828 C kinetochore microtubule
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0005874 C microtubule
GO:0005876 C spindle microtubule
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007349 P cellularization
GO:0008090 P retrograde axonal transport
GO:0010970 P transport along microtubule
GO:0016330 P second mitotic wave involved in compound eye morphogenesis
GO:0022008 P neurogenesis
GO:0030286 C dynein complex
GO:0030496 C midbody
GO:0031616 C spindle pole centrosome
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0035371 C microtubule plus-end
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045502 F dynein complex binding
GO:0047497 P mitochondrion transport along microtubule
GO:0048477 P oogenesis
GO:0048491 P retrograde synaptic vesicle transport
GO:0048675 P axon extension
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051256 P mitotic spindle midzone assembly
GO:0051299 P centrosome separation
GO:0051383 P kinetochore organization
GO:0051642 P centrosome localization
GO:0070840 F dynein complex binding
GO:1904115 C axon cytoplasm
9347 O_BomoIG14650_complete:A_BomoIG_DN32649_c0_g1_i14
322bp
 transcription_cofactor_vestigial-like_protein_4_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
9348 O_BomoIG14651_complete:A_BomoIG_DN32649_c0_g1_i14
135bp
9349 O_BomoIG14652_5prime_partial:A_BomoIG_DN32649_c0_g1_i15
233bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
9350 O_BomoIG14653_complete:A_BomoIG_DN32649_c0_g1_i15
120bp
9351 O_BomoIG14654_complete:A_BomoIG_DN32649_c0_g1_i16
238bp
 transcription_cofactor_vestigial-like_protein_4_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
9352 O_BomoIG14655_3prime_partial:A_BomoIG_DN32649_c0_g1_i17
125bp
9353 O_BomoIG14656_5prime_partial:A_BomoIG_DN32649_c0_g1_i18
247bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
9354 O_BomoIG14657_complete:A_BomoIG_DN32649_c0_g1_i18
120bp
9355 O_BomoIG14658_3prime_partial:A_BomoIG_DN32649_c0_g1_i18
100bp
9356 O_BomoIG14659_complete:A_BomoIG_DN32631_c2_g1_i1
344bp
 abdominal_A_isoform_3_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0043565 F sequence-specific DNA binding
9357 O_BomoIG1465_complete:A_BomoIG_DN30243_c1_g1_i9
136bp
9358 O_BomoIG14660_complete:A_BomoIG_DN32631_c2_g4_i1
111bp
9359 O_BomoIG14661_complete:A_BomoIG_DN32631_c2_g4_i1
101bp
9360 O_BomoIG14662_complete:A_BomoIG_DN32631_c2_g4_i2
226bp
 protein_held_out_wings_isoform_X5_[Bombyx_mori]
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0007284 P spermatogonial cell division
GO:0007438 P oenocyte development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007521 P muscle cell fate determination
GO:0007525 P somatic muscle development
GO:0008016 P regulation of heart contraction
GO:0008078 P mesodermal cell migration
GO:0008347 P glial cell migration
GO:0008366 P axon ensheathment
GO:0016203 P muscle attachment
GO:0016477 P cell migration
GO:0030154 P cell differentiation
GO:0030718 P germ-line stem cell population maintenance
GO:0045214 P sarcomere organization
GO:0045995 P regulation of embryonic development
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