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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9121 O_BomoIG14447_complete:A_BomoIG_DN32691_c1_g1_i28
133bp
9122 O_BomoIG14448_5prime_partial:A_BomoIG_DN32691_c1_g1_i29
745bp
 protein_lin-54_homolog_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
9123 O_BomoIG14449_complete:A_BomoIG_DN32691_c1_g1_i29
256bp
 protein_msta_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
9124 O_BomoIG1444_5prime_partial:A_BomoIG_DN30243_c1_g1_i3
205bp
9125 O_BomoIG14450_complete:A_BomoIG_DN32691_c1_g1_i29
158bp
9126 O_BomoIG14451_complete:A_BomoIG_DN32691_c1_g1_i29
110bp
9127 O_BomoIG14452_5prime_partial:A_BomoIG_DN32691_c1_g1_i30
745bp
 protein_lin-54_homolog_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
9128 O_BomoIG14453_complete:A_BomoIG_DN32691_c1_g1_i30
456bp
 protein_msta_[Bombyx_mori]
GO:0008168 F methyltransferase activity
GO:0010629 P negative regulation of gene expression
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0042826 F histone deacetylase binding
9129 O_BomoIG14454_complete:A_BomoIG_DN32691_c1_g1_i30
158bp
9130 O_BomoIG14455_complete:A_BomoIG_DN32691_c1_g1_i30
110bp
9131 O_BomoIG14456_complete:A_BomoIG_DN32691_c1_g1_i31
141bp
 protein_msta_[Bombyx_mori]
9132 O_BomoIG14457_complete:A_BomoIG_DN32691_c1_g1_i32
794bp
 protein_lin-54_homolog_isoform_X3_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
9133 O_BomoIG14458_complete:A_BomoIG_DN32691_c1_g1_i32
456bp
 protein_msta_[Bombyx_mori]
GO:0008168 F methyltransferase activity
GO:0010629 P negative regulation of gene expression
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0042826 F histone deacetylase binding
9134 O_BomoIG14459_complete:A_BomoIG_DN32691_c1_g1_i32
158bp
9135 O_BomoIG1445_complete:A_BomoIG_DN30243_c1_g1_i4
975bp
 dynactin_subunit_1_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0001709 P cell fate determination
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0001754 P eye photoreceptor cell differentiation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005818 C aster
GO:0005828 C kinetochore microtubule
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0005874 C microtubule
GO:0005876 C spindle microtubule
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007349 P cellularization
GO:0008090 P retrograde axonal transport
GO:0010970 P transport along microtubule
GO:0016330 P second mitotic wave involved in compound eye morphogenesis
GO:0022008 P neurogenesis
GO:0030286 C dynein complex
GO:0030496 C midbody
GO:0031616 C spindle pole centrosome
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0035371 C microtubule plus-end
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045502 F dynein complex binding
GO:0047497 P mitochondrion transport along microtubule
GO:0048477 P oogenesis
GO:0048491 P retrograde synaptic vesicle transport
GO:0048675 P axon extension
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051256 P mitotic spindle midzone assembly
GO:0051299 P centrosome separation
GO:0051383 P kinetochore organization
GO:0051642 P centrosome localization
GO:0070840 F dynein complex binding
GO:1904115 C axon cytoplasm
9136 O_BomoIG14460_complete:A_BomoIG_DN32691_c1_g1_i32
110bp
9137 O_BomoIG14461_complete:A_BomoIG_DN32691_c1_g1_i33
656bp
 protein_lin-54_homolog_isoform_X3_[Bombyx_mori]
GO:0000794 C condensed nuclear chromosome
GO:0001046 F core promoter sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0030849 C autosome
GO:0070176 C DRM complex
9138 O_BomoIG14462_complete:A_BomoIG_DN32691_c1_g1_i33
456bp
 protein_msta_[Bombyx_mori]
GO:0008168 F methyltransferase activity
GO:0010629 P negative regulation of gene expression
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0042826 F histone deacetylase binding
9139 O_BomoIG14463_complete:A_BomoIG_DN32691_c1_g1_i33
135bp
9140 O_BomoIG14464_complete:A_BomoIG_DN32691_c1_g1_i33
133bp
9141 O_BomoIG14465_complete:A_BomoIG_DN32691_c1_g1_i34
513bp
 protein_msta_[Bombyx_mori]
GO:0008168 F methyltransferase activity
GO:0010629 P negative regulation of gene expression
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0042826 F histone deacetylase binding
9142 O_BomoIG14466_complete:A_BomoIG_DN32691_c1_g1_i34
167bp
9143 O_BomoIG14467_complete:A_BomoIG_DN32691_c1_g1_i34
117bp
 hypothetical_protein_KGM_209742_[Danaus_plexippus_plexippus]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
9144 O_BomoIG14468_complete:A_BomoIG_DN32691_c1_g1_i34
110bp
9145 O_BomoIG14469_5prime_partial:A_BomoIG_DN32691_c1_g1_i35
607bp
 protein_lin-54_homolog_isoform_X1_[Bombyx_mori]
GO:0000794 C condensed nuclear chromosome
GO:0001046 F core promoter sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0030849 C autosome
GO:0070176 C DRM complex
9146 O_BomoIG1446_complete:A_BomoIG_DN30243_c1_g1_i4
162bp
9147 O_BomoIG14470_complete:A_BomoIG_DN32691_c1_g1_i35
513bp
 protein_msta_[Bombyx_mori]
GO:0008168 F methyltransferase activity
GO:0010629 P negative regulation of gene expression
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0042826 F histone deacetylase binding
9148 O_BomoIG14471_complete:A_BomoIG_DN32691_c1_g1_i35
135bp
9149 O_BomoIG14472_complete:A_BomoIG_DN32691_c1_g1_i35
133bp
9150 O_BomoIG14473_3prime_partial:A_BomoIG_DN32691_c1_g1_i35
121bp
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