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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8881 O_BomoIG14230_complete:A_BomoIG_DN32623_c2_g1_i4
149bp
8882 O_BomoIG14231_complete:A_BomoIG_DN32623_c2_g3_i3
162bp
 uncharacterized_protein_LOC110385069_[Bombyx_mori]
8883 O_BomoIG14232_complete:A_BomoIG_DN32623_c2_g5_i10
684bp
 sphingomyelin_phosphodiesterase_isoform_X1_[Bombyx_mori]
GO:0004767 F sphingomyelin phosphodiesterase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0006685 P sphingomyelin catabolic process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0023021 P termination of signal transduction
GO:0035307 P positive regulation of protein dephosphorylation
GO:0043407 P negative regulation of MAP kinase activity
GO:0045121 C membrane raft
GO:0046513 P ceramide biosynthetic process
GO:0046872 F metal ion binding
GO:0061750 F acid sphingomyelin phosphodiesterase activity
GO:0070062 C extracellular exosome
8884 O_BomoIG14233_internal:A_BomoIG_DN32685_c5_g2_i2
99bp
 reverse_transcriptase,_partial_[Bombyx_mandarina]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8885 O_BomoIG14234_internal:A_BomoIG_DN32685_c5_g2_i3
104bp
 reverse_transcriptase,_partial_[Bombyx_mandarina]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8886 O_BomoIG14235_3prime_partial:A_BomoIG_DN32685_c5_g4_i3
218bp
 alpha-ketoglutarate-dependent_dioxygenase_alkB_homolog_7,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006631 P fatty acid metabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0010883 P regulation of lipid storage
GO:0012501 P programmed cell death
GO:0016491 F oxidoreductase activity
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:1902445 P regulation of mitochondrial membrane permeability involved in programmed necrotic cell death
8887 O_BomoIG14236_5prime_partial:A_BomoIG_DN32685_c5_g9_i1
116bp
8888 O_BomoIG14237_complete:A_BomoIG_DN32685_c5_g10_i1
388bp
 zinc_finger_CCCH_domain-containing_protein_15_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0046872 F metal ion binding
8889 O_BomoIG14238_complete:A_BomoIG_DN32685_c5_g10_i1
140bp
8890 O_BomoIG14239_complete:A_BomoIG_DN32685_c5_g10_i2
388bp
 zinc_finger_CCCH_domain-containing_protein_15_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0046872 F metal ion binding
8891 O_BomoIG1423_5prime_partial:A_BomoIG_DN30205_c1_g1_i7
243bp
 neuroligin-4,_Y-linked_isoform_X1_[Bombyx_mori]
GO:0004104 F cholinesterase activity
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0045202 C synapse
GO:0046929 P negative regulation of neurotransmitter secretion
8892 O_BomoIG14240_complete:A_BomoIG_DN32685_c5_g10_i2
140bp
8893 O_BomoIG14241_complete:A_BomoIG_DN32685_c5_g4_i4
243bp
 alpha-ketoglutarate-dependent_dioxygenase_alkB_homolog_7,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006631 P fatty acid metabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0010883 P regulation of lipid storage
GO:0012501 P programmed cell death
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:1902445 P regulation of mitochondrial membrane permeability involved in programmed necrotic cell death
8894 O_BomoIG14242_5prime_partial:A_BomoIG_DN32685_c5_g4_i4
210bp
8895 O_BomoIG14243_5prime_partial:A_BomoIG_DN32685_c5_g4_i4
155bp
 zinc_finger_protein_668_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007140 P male meiotic nuclear division
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
GO:0051039 P positive regulation of transcription involved in meiotic cell cycle
GO:0051321 P meiotic cell cycle
8896 O_BomoIG14244_3prime_partial:A_BomoIG_DN32685_c5_g4_i4
103bp
8897 O_BomoIG14245_internal:A_BomoIG_DN32685_c5_g2_i9
107bp
 reverse_transcriptase,_partial_[Bombyx_mandarina]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8898 O_BomoIG14246_internal:A_BomoIG_DN32685_c5_g2_i10
104bp
 reverse_transcriptase,_partial_[Bombyx_mandarina]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8899 O_BomoIG14247_complete:A_BomoIG_DN32685_c5_g10_i3
255bp
 zinc_finger_CCCH_domain-containing_protein_15_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0046872 F metal ion binding
8900 O_BomoIG14248_complete:A_BomoIG_DN32685_c5_g10_i3
140bp
8901 O_BomoIG14249_5prime_partial:A_BomoIG_DN32638_c2_g1_i2
158bp
8902 O_BomoIG1424_complete:A_BomoIG_DN30205_c1_g2_i4
303bp
 neuroligin-4,_Y-linked_isoform_X2_[Bombyx_mori]
GO:0002124 P territorial aggressive behavior
GO:0003360 P brainstem development
GO:0004872 F signaling receptor activity
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007158 P neuron cell-cell adhesion
GO:0007416 P synapse assembly
GO:0008049 P male courtship behavior
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021549 P cerebellum development
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0035176 P social behavior
GO:0035265 P organ growth
GO:0042043 F neurexin family protein binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0050804 P modulation of chemical synaptic transmission
GO:0052689 F carboxylic ester hydrolase activity
GO:0060076 C excitatory synapse
GO:0071625 P vocalization behavior
GO:0090394 P negative regulation of excitatory postsynaptic potential
GO:0097105 P presynaptic membrane assembly
8903 O_BomoIG14250_5prime_partial:A_BomoIG_DN32638_c2_g1_i2
132bp
 DNA-binding_protein_RFX2_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0031018 P endocrine pancreas development
GO:0044212 F transcription cis-regulatory region binding
GO:0050796 P regulation of insulin secretion
GO:0060285 P cilium-dependent cell motility
GO:0060287 P epithelial cilium movement involved in determination of left/right asymmetry
8904 O_BomoIG14251_internal:A_BomoIG_DN32638_c2_g1_i3
194bp
8905 O_BomoIG14252_5prime_partial:A_BomoIG_DN32638_c2_g1_i3
132bp
 DNA-binding_protein_RFX2_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0031018 P endocrine pancreas development
GO:0044212 F transcription cis-regulatory region binding
GO:0050796 P regulation of insulin secretion
GO:0060285 P cilium-dependent cell motility
GO:0060287 P epithelial cilium movement involved in determination of left/right asymmetry
8906 O_BomoIG14253_complete:A_BomoIG_DN32638_c3_g1_i1
281bp
 uncharacterized_protein_LOC101735462_[Bombyx_mori]
8907 O_BomoIG14254_complete:A_BomoIG_DN32638_c3_g1_i4
159bp
 uncharacterized_protein_LOC101735462_[Bombyx_mori]
8908 O_BomoIG14255_complete:A_BomoIG_DN32638_c5_g1_i2
138bp
 BRCA1-A_complex_subunit_BRE_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0010212 P response to ionizing radiation
GO:0016568 P chromatin organization
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0051301 P cell division
GO:0070531 C BRCA1-A complex
GO:0070552 C BRISC complex
8909 O_BomoIG14256_complete:A_BomoIG_DN32638_c5_g1_i2
131bp
 BRCA1-A_complex_subunit_BRE_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0010212 P response to ionizing radiation
GO:0016568 P chromatin organization
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0051301 P cell division
GO:0070531 C BRCA1-A complex
GO:0070552 C BRISC complex
8910 O_BomoIG14257_complete:A_BomoIG_DN32638_c5_g1_i4
367bp
 BRCA1-A_complex_subunit_BRE_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0010212 P response to ionizing radiation
GO:0016568 P chromatin organization
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0051301 P cell division
GO:0070531 C BRCA1-A complex
GO:0070552 C BRISC complex
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