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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
871 O_BomoIG100785_complete:A_BomoIG_DN30792_c0_g1_i2
166bp
 BUB3-interacting_and_GLEBS_motif-containing_protein_ZNF207_isoform_X2_[Bombyx_mori]
872 O_BomoIG100786_complete:A_BomoIG_DN30792_c0_g1_i2
149bp
873 O_BomoIG100787_complete:A_BomoIG_DN30792_c0_g1_i2
145bp
874 O_BomoIG100788_complete:A_BomoIG_DN30792_c0_g4_i3
1249bp
 GRIP_and_coiled-coil_domain-containing_protein_2_[Bombyx_mori]
GO:0000042 P protein localization to Golgi apparatus
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0006622 P protein targeting to lysosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031023 P microtubule organizing center organization
GO:0034067 P protein localization to Golgi apparatus
GO:0034453 P microtubule anchoring
GO:0034499 P late endosome to Golgi transport
GO:0042147 P retrograde transport, endosome to Golgi
GO:0042802 F identical protein binding
GO:0043001 P Golgi to plasma membrane protein transport
GO:0070861 P regulation of protein exit from endoplasmic reticulum
GO:0071955 P recycling endosome to Golgi transport
GO:0090161 P Golgi ribbon formation
875 O_BomoIG100789_complete:A_BomoIG_DN30792_c0_g3_i2
282bp
 Serine/threonine-protein_kinase_MARK2_[Operophtera_brumata]
876 O_BomoIG10078_complete:A_BomoIG_DN33756_c1_g1_i8
130bp
 scaffold_attachment_factor_B2_[Bombyx_mori]
877 O_BomoIG100790_complete:A_BomoIG_DN30792_c0_g6_i1
126bp
 argonaute_1_[Danaus_plexippus_plexippus]
GO:0000932 C P-body
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000993 F RNA polymerase II complex binding
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003727 F single-stranded RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005844 C polysome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0010501 P RNA secondary structure unwinding
GO:0010586 P miRNA metabolic process
GO:0010628 P positive regulation of gene expression
GO:0016442 C RISC complex
GO:0030529 C ribonucleoprotein complex
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0035068 C RISC complex
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0035198 F miRNA binding
GO:0035278 P miRNA-mediated gene silencing by inhibition of translation
GO:0035280 P miRNA loading onto RISC involved in gene silencing by miRNA
GO:0044212 F transcription cis-regulatory region binding
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070578 C RISC-loading complex
878 O_BomoIG100791_complete:A_BomoIG_DN30792_c0_g1_i3
331bp
 BUB3-interacting_and_GLEBS_motif-containing_protein_ZNF207_isoform_X1_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0001578 P microtubule bundle formation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0008017 F microtubule binding
GO:0008608 P attachment of spindle microtubules to kinetochore
GO:0046785 P microtubule polymerization
GO:0046872 F metal ion binding
GO:0050821 P protein stabilization
GO:0051301 P cell division
GO:0051983 P regulation of chromosome segregation
GO:0090307 P mitotic spindle assembly
GO:1990047 C spindle matrix
879 O_BomoIG100792_complete:A_BomoIG_DN30792_c0_g1_i3
145bp
880 O_BomoIG100793_complete:A_BomoIG_DN30792_c0_g3_i3
282bp
 Serine/threonine-protein_kinase_MARK2_[Operophtera_brumata]
881 O_BomoIG100794_complete:A_BomoIG_DN30792_c0_g1_i4
166bp
 BUB3-interacting_and_GLEBS_motif-containing_protein_ZNF207_isoform_X2_[Bombyx_mori]
882 O_BomoIG100795_complete:A_BomoIG_DN30792_c0_g1_i4
149bp
883 O_BomoIG100796_complete:A_BomoIG_DN30792_c0_g1_i4
105bp
 BUB3-interacting_and_GLEBS_motif-containing_protein_ZNF207_isoform_X1_[Bombyx_mori]
884 O_BomoIG100797_complete:A_BomoIG_DN30792_c0_g1_i5
139bp
 Zinc_finger_protein_207_[Papilio_xuthus]
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0001578 P microtubule bundle formation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0008017 F microtubule binding
GO:0008608 P attachment of spindle microtubules to kinetochore
GO:0046785 P microtubule polymerization
GO:0046872 F metal ion binding
GO:0050821 P protein stabilization
GO:0051301 P cell division
GO:0051983 P regulation of chromosome segregation
GO:0090307 P mitotic spindle assembly
GO:1990047 C spindle matrix
885 O_BomoIG100798_3prime_partial:A_BomoIG_DN30792_c0_g4_i5
722bp
 GRIP_and_coiled-coil_domain-containing_protein_2_[Bombyx_mori]
886 O_BomoIG100799_complete:A_BomoIG_DN30792_c0_g6_i2
913bp
 argonaute_1_[Bombyx_mori]
GO:0000340 F RNA 7-methylguanosine cap binding
GO:0000932 C P-body
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005844 C polysome
GO:0005845 C mRNA cap binding complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0008150 P biological_process
GO:0016442 C RISC complex
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030154 P cell differentiation
GO:0030529 C ribonucleoprotein complex
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0035068 C RISC complex
GO:0035197 F siRNA binding
GO:0035198 F miRNA binding
GO:0035278 P miRNA-mediated gene silencing by inhibition of translation
GO:0035279 P miRNA-mediated gene silencing by mRNA destabilization
GO:0045947 P negative regulation of translational initiation
GO:0046872 F metal ion binding
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0070551 F endoribonuclease activity, cleaving siRNA-paired mRNA
GO:0070578 C RISC-loading complex
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:1900153 P positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
887 O_BomoIG10079_complete:A_BomoIG_DN33756_c1_g1_i9
158bp
 scaffold_attachment_factor_B2_[Bombyx_mori]
888 O_BomoIG1007_internal:A_BomoIG_DN30229_c1_g3_i5
137bp
889 O_BomoIG100800_complete:A_BomoIG_DN30792_c0_g3_i4
282bp
 Serine/threonine-protein_kinase_MARK2_[Operophtera_brumata]
890 O_BomoIG100801_complete:A_BomoIG_DN30792_c0_g1_i7
200bp
 BUB3-interacting_and_GLEBS_motif-containing_protein_ZNF207_isoform_X2_[Bombyx_mori]
891 O_BomoIG100802_complete:A_BomoIG_DN30792_c0_g1_i7
149bp
892 O_BomoIG100803_5prime_partial:A_BomoIG_DN30792_c0_g1_i7
135bp
893 O_BomoIG100804_3prime_partial:A_BomoIG_DN30792_c0_g1_i7
117bp
894 O_BomoIG100805_complete:A_BomoIG_DN30792_c0_g1_i8
227bp
 BUB3-interacting_and_GLEBS_motif-containing_protein_ZNF207_isoform_X2_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0001578 P microtubule bundle formation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0008017 F microtubule binding
GO:0008608 P attachment of spindle microtubules to kinetochore
GO:0046785 P microtubule polymerization
GO:0046872 F metal ion binding
GO:0050821 P protein stabilization
GO:0051301 P cell division
GO:0051983 P regulation of chromosome segregation
GO:0090307 P mitotic spindle assembly
GO:1990047 C spindle matrix
895 O_BomoIG100806_complete:A_BomoIG_DN30792_c0_g1_i8
149bp
896 O_BomoIG100807_complete:A_BomoIG_DN30792_c0_g1_i8
145bp
897 O_BomoIG100808_complete:A_BomoIG_DN30792_c0_g4_i7
1314bp
 GRIP_and_coiled-coil_domain-containing_protein_2_[Bombyx_mori]
GO:0000042 P protein localization to Golgi apparatus
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0006622 P protein targeting to lysosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031023 P microtubule organizing center organization
GO:0034067 P protein localization to Golgi apparatus
GO:0034453 P microtubule anchoring
GO:0034499 P late endosome to Golgi transport
GO:0042147 P retrograde transport, endosome to Golgi
GO:0042802 F identical protein binding
GO:0043001 P Golgi to plasma membrane protein transport
GO:0070861 P regulation of protein exit from endoplasmic reticulum
GO:0071955 P recycling endosome to Golgi transport
GO:0090161 P Golgi ribbon formation
898 O_BomoIG100809_complete:A_BomoIG_DN30792_c0_g1_i10
279bp
 BUB3-interacting_and_GLEBS_motif-containing_protein_ZNF207_isoform_X1_[Bombyx_mori]
899 O_BomoIG10080_complete:A_BomoIG_DN33756_c1_g1_i9
130bp
 scaffold_attachment_factor_B2_[Bombyx_mori]
900 O_BomoIG100810_complete:A_BomoIG_DN30792_c0_g1_i11
281bp
 BUB3-interacting_and_GLEBS_motif-containing_protein_ZNF207_isoform_X2_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0001578 P microtubule bundle formation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0008017 F microtubule binding
GO:0008608 P attachment of spindle microtubules to kinetochore
GO:0046785 P microtubule polymerization
GO:0046872 F metal ion binding
GO:0050821 P protein stabilization
GO:0051301 P cell division
GO:0051983 P regulation of chromosome segregation
GO:0090307 P mitotic spindle assembly
GO:1990047 C spindle matrix
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