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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7741 O_BomoIG13204_complete:A_BomoIG_DN31331_c1_g4_i8
123bp
7742 O_BomoIG13205_3prime_partial:A_BomoIG_DN31331_c1_g1_i6
967bp
 zinc_finger_MYM-type_protein_4_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007010 P cytoskeleton organization
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0022604 P regulation of cell morphogenesis
GO:0046872 F metal ion binding
7743 O_BomoIG13206_complete:A_BomoIG_DN31331_c1_g1_i6
109bp
7744 O_BomoIG13207_complete:A_BomoIG_DN31331_c1_g4_i9
1336bp
 GTPase-activating_protein_isoform_X1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008293 P torso signaling pathway
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016321 P female meiosis chromosome segregation
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0035556 P intracellular signal transduction
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045678 P positive regulation of R7 cell differentiation
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
7745 O_BomoIG13208_complete:A_BomoIG_DN31331_c1_g4_i9
232bp
7746 O_BomoIG13209_complete:A_BomoIG_DN31331_c1_g4_i9
176bp
7747 O_BomoIG1320_3prime_partial:A_BomoIG_DN30202_c7_g3_i9
293bp
 nitric_oxide-associated_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006915 P apoptotic process
GO:0010941 P regulation of cell death
GO:0016020 C membrane
GO:0031314 C extrinsic component of mitochondrial inner membrane
GO:0032543 P mitochondrial translation
GO:0042254 P ribosome biogenesis
GO:0043457 P regulation of cellular respiration
7748 O_BomoIG13210_complete:A_BomoIG_DN31331_c1_g4_i9
161bp
7749 O_BomoIG13211_complete:A_BomoIG_DN31331_c1_g4_i9
140bp
7750 O_BomoIG13212_complete:A_BomoIG_DN31331_c1_g4_i9
123bp
7751 O_BomoIG13213_complete:A_BomoIG_DN31331_c1_g4_i9
101bp
7752 O_BomoIG13214_complete:A_BomoIG_DN31331_c1_g7_i2
177bp
 exosome_complex_component_RRP4_[Bombyx_mori]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0000467 P exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0004532 F exoribonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006364 P rRNA processing
GO:0008312 F 7S RNA binding
GO:0030307 P positive regulation of cell growth
GO:0034427 P nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0034475 P U4 snRNA 3'-end processing
GO:0043488 P regulation of mRNA stability
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0071034 P CUT catabolic process
GO:0071035 P nuclear polyadenylation-dependent rRNA catabolic process
GO:0071038 P nuclear polyadenylation-dependent tRNA catabolic process
GO:0071049 P nuclear mRNA surveillance
GO:0071051 P polyadenylation-dependent snoRNA 3'-end processing
7753 O_BomoIG13215_complete:A_BomoIG_DN31331_c1_g4_i10
1334bp
 GTPase-activating_protein_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008293 P torso signaling pathway
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016321 P female meiosis chromosome segregation
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0035556 P intracellular signal transduction
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045678 P positive regulation of R7 cell differentiation
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
7754 O_BomoIG13216_complete:A_BomoIG_DN31331_c1_g4_i10
230bp
7755 O_BomoIG13217_complete:A_BomoIG_DN31331_c1_g4_i10
176bp
7756 O_BomoIG13218_complete:A_BomoIG_DN31331_c1_g4_i10
161bp
7757 O_BomoIG13219_complete:A_BomoIG_DN31331_c1_g4_i10
140bp
7758 O_BomoIG1321_complete:A_BomoIG_DN30202_c7_g3_i9
123bp
7759 O_BomoIG13220_complete:A_BomoIG_DN31331_c1_g4_i10
123bp
7760 O_BomoIG13221_complete:A_BomoIG_DN31331_c1_g4_i10
101bp
7761 O_BomoIG13222_complete:A_BomoIG_DN31331_c1_g4_i11
343bp
 GTPase-activating_protein_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008293 P torso signaling pathway
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016321 P female meiosis chromosome segregation
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0035556 P intracellular signal transduction
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045678 P positive regulation of R7 cell differentiation
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
7762 O_BomoIG13223_complete:A_BomoIG_DN31331_c1_g4_i11
140bp
7763 O_BomoIG13224_complete:A_BomoIG_DN31331_c1_g4_i11
123bp
7764 O_BomoIG13225_complete:A_BomoIG_DN31325_c1_g2_i1
242bp
 probable_dolichyl_pyrophosphate_Glc1Man9GlcNAc2_alpha-1,3-glucosyltransferase_[Bombyx_mori]
GO:0000033 F alpha-1,3-mannosyltransferase activity
GO:0004583 F dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0006488 P dolichol-linked oligosaccharide biosynthetic process
GO:0006490 P oligosaccharide-lipid intermediate biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0042281 F dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
GO:0097502 P mannosylation
7765 O_BomoIG13226_complete:A_BomoIG_DN31325_c1_g2_i1
217bp
 probable_dolichyl_pyrophosphate_Glc1Man9GlcNAc2_alpha-1,3-glucosyltransferase_[Bombyx_mori]
GO:0000033 F alpha-1,3-mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0006490 P oligosaccharide-lipid intermediate biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0042281 F dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
GO:0097502 P mannosylation
7766 O_BomoIG13227_complete:A_BomoIG_DN31325_c1_g2_i3
178bp
 probable_dolichyl_pyrophosphate_Glc1Man9GlcNAc2_alpha-1,3-glucosyltransferase_[Bombyx_mori]
GO:0000033 F alpha-1,3-mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0006490 P oligosaccharide-lipid intermediate biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0042281 F dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
GO:0097502 P mannosylation
7767 O_BomoIG13228_complete:A_BomoIG_DN31325_c1_g2_i6
531bp
 probable_dolichyl_pyrophosphate_Glc1Man9GlcNAc2_alpha-1,3-glucosyltransferase_[Bombyx_mori]
GO:0000033 F alpha-1,3-mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0006490 P oligosaccharide-lipid intermediate biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0042281 F dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
GO:0097502 P mannosylation
7768 O_BomoIG13229_complete:A_BomoIG_DN31325_c1_g2_i7
344bp
 probable_dolichyl_pyrophosphate_Glc1Man9GlcNAc2_alpha-1,3-glucosyltransferase_[Bombyx_mori]
GO:0000033 F alpha-1,3-mannosyltransferase activity
GO:0004583 F dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0006488 P dolichol-linked oligosaccharide biosynthetic process
GO:0006490 P oligosaccharide-lipid intermediate biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0042281 F dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
GO:0097502 P mannosylation
7769 O_BomoIG1322_complete:A_BomoIG_DN30202_c7_g1_i6
105bp
 protein_YIPF2_[Bombyx_mori]
GO:0002230 P positive regulation of defense response to virus by host
GO:0003674 F molecular_function
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030133 C transport vesicle
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
7770 O_BomoIG13230_complete:A_BomoIG_DN31325_c1_g2_i9
257bp
 probable_dolichyl_pyrophosphate_Glc1Man9GlcNAc2_alpha-1,3-glucosyltransferase_[Bombyx_mori]
GO:0000033 F alpha-1,3-mannosyltransferase activity
GO:0004583 F dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0006488 P dolichol-linked oligosaccharide biosynthetic process
GO:0006490 P oligosaccharide-lipid intermediate biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0042281 F dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
GO:0097502 P mannosylation
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