SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/104180
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7441 O_BomoIG12935_complete:A_BomoIG_DN31353_c2_g2_i5
118bp
7442 O_BomoIG12936_complete:A_BomoIG_DN31353_c2_g6_i2
104bp
7443 O_BomoIG12937_complete:A_BomoIG_DN31353_c2_g1_i3
261bp
 organic_cation_transporter_protein_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
7444 O_BomoIG12938_complete:A_BomoIG_DN31353_c2_g2_i6
343bp
 acylamino-acid-releasing_enzyme_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008236 F serine-type peptidase activity
GO:0008242 F omega peptidase activity
GO:0016787 F hydrolase activity
GO:0031965 C nuclear membrane
GO:0044822 F RNA binding
GO:0050435 P amyloid-beta metabolic process
GO:0070062 C extracellular exosome
7445 O_BomoIG12939_complete:A_BomoIG_DN31353_c2_g2_i6
154bp
7446 O_BomoIG1293_3prime_partial:A_BomoIG_DN30202_c7_g3_i2
375bp
 protein_crumbs_[Bombyx_mori]
GO:0001738 P morphogenesis of a polarized epithelium
GO:0001745 P compound eye morphogenesis
GO:0002009 P morphogenesis of an epithelium
GO:0005080 F protein kinase C binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0005918 C septate junction
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007435 P salivary gland morphogenesis
GO:0007443 P Malpighian tubule morphogenesis
GO:0008104 P protein localization
GO:0008284 P positive regulation of cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016028 C rhabdomere
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0030154 P cell differentiation
GO:0030507 F spectrin binding
GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032880 P regulation of protein localization
GO:0033157 P regulation of intracellular protein transport
GO:0034332 P adherens junction organization
GO:0035002 P liquid clearance, open tracheal system
GO:0035003 C subapical complex
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035090 P maintenance of apical/basal cell polarity
GO:0035239 P tube morphogenesis
GO:0035330 P regulation of hippo signaling
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0042327 P positive regulation of phosphorylation
GO:0045186 P zonula adherens assembly
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045218 P zonula adherens maintenance
GO:0045494 P photoreceptor cell maintenance
GO:0045570 P regulation of imaginal disc growth
GO:0045746 P negative regulation of Notch signaling pathway
GO:0046621 P negative regulation of organ growth
GO:0046664 P dorsal closure, amnioserosa morphology change
GO:0048477 P oogenesis
GO:0050821 P protein stabilization
GO:0051642 P centrosome localization
GO:0061024 P membrane organization
GO:0061336 P cell morphogenesis involved in Malpighian tubule morphogenesis
GO:0061541 P rhabdomere morphogenesis
GO:0098813 P nuclear chromosome segregation
7447 O_BomoIG12940_3prime_partial:A_BomoIG_DN31353_c2_g2_i7
168bp
 acylamino-acid-releasing_enzyme_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006415 P translational termination
GO:0006508 P proteolysis
GO:0008236 F serine-type peptidase activity
GO:0008242 F omega peptidase activity
GO:0016787 F hydrolase activity
GO:0031965 C nuclear membrane
GO:0044822 F RNA binding
GO:0050435 P amyloid-beta metabolic process
GO:0070062 C extracellular exosome
7448 O_BomoIG12941_5prime_partial:A_BomoIG_DN31353_c2_g2_i7
164bp
7449 O_BomoIG12942_complete:A_BomoIG_DN31353_c2_g2_i7
104bp
7450 O_BomoIG12943_complete:A_BomoIG_DN31353_c2_g4_i6
320bp
7451 O_BomoIG12944_5prime_partial:A_BomoIG_DN31353_c2_g4_i6
259bp
 endothelial_zinc_finger_protein_induced_by_tumor_necrosis_factor_alpha-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
7452 O_BomoIG12945_complete:A_BomoIG_DN31353_c2_g4_i6
196bp
7453 O_BomoIG12946_complete:A_BomoIG_DN31353_c2_g4_i6
159bp
 endothelial_zinc_finger_protein_induced_by_tumor_necrosis_factor_alpha-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7454 O_BomoIG12947_internal:A_BomoIG_DN31353_c2_g2_i8
423bp
 acylamino-acid-releasing_enzyme_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
7455 O_BomoIG12948_5prime_partial:A_BomoIG_DN31353_c2_g2_i8
164bp
7456 O_BomoIG12949_complete:A_BomoIG_DN31353_c2_g2_i8
118bp
7457 O_BomoIG1294_complete:A_BomoIG_DN30202_c7_g3_i2
321bp
 protein_crumbs_[Bombyx_mori]
GO:0001738 P morphogenesis of a polarized epithelium
GO:0001745 P compound eye morphogenesis
GO:0002009 P morphogenesis of an epithelium
GO:0005080 F protein kinase C binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0005918 C septate junction
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007435 P salivary gland morphogenesis
GO:0007443 P Malpighian tubule morphogenesis
GO:0008104 P protein localization
GO:0008284 P positive regulation of cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016028 C rhabdomere
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0030154 P cell differentiation
GO:0030507 F spectrin binding
GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032880 P regulation of protein localization
GO:0033157 P regulation of intracellular protein transport
GO:0034332 P adherens junction organization
GO:0035002 P liquid clearance, open tracheal system
GO:0035003 C subapical complex
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035090 P maintenance of apical/basal cell polarity
GO:0035239 P tube morphogenesis
GO:0035330 P regulation of hippo signaling
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0042327 P positive regulation of phosphorylation
GO:0045186 P zonula adherens assembly
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045218 P zonula adherens maintenance
GO:0045494 P photoreceptor cell maintenance
GO:0045570 P regulation of imaginal disc growth
GO:0045746 P negative regulation of Notch signaling pathway
GO:0046621 P negative regulation of organ growth
GO:0046664 P dorsal closure, amnioserosa morphology change
GO:0048477 P oogenesis
GO:0050821 P protein stabilization
GO:0051642 P centrosome localization
GO:0061024 P membrane organization
GO:0061336 P cell morphogenesis involved in Malpighian tubule morphogenesis
GO:0061541 P rhabdomere morphogenesis
GO:0098813 P nuclear chromosome segregation
7458 O_BomoIG12950_complete:A_BomoIG_DN31353_c2_g1_i4
159bp
 organic_cation_transporter_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0009437 P carnitine metabolic process
GO:0015226 F carnitine transmembrane transporter activity
GO:0015491 F cation:cation antiporter activity
GO:0015879 P carnitine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0031231 C intrinsic component of peroxisomal membrane
GO:0055085 P transmembrane transport
GO:0098655 P cation transmembrane transport
GO:1902603 P carnitine transmembrane transport
7459 O_BomoIG12951_complete:A_BomoIG_DN31353_c2_g1_i5
543bp
 organic_cation_transporter_protein_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
7460 O_BomoIG12952_complete:A_BomoIG_DN31353_c2_g1_i5
152bp
7461 O_BomoIG12953_5prime_partial:A_BomoIG_DN31353_c2_g3_i3
122bp
 acylamino-acid-releasing_enzyme_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
7462 O_BomoIG12954_3prime_partial:A_BomoIG_DN31353_c2_g2_i11
597bp
 acylamino-acid-releasing_enzyme_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008236 F serine-type peptidase activity
GO:0008242 F omega peptidase activity
GO:0016787 F hydrolase activity
GO:0031965 C nuclear membrane
GO:0044822 F RNA binding
GO:0050435 P amyloid-beta metabolic process
GO:0070062 C extracellular exosome
7463 O_BomoIG12955_complete:A_BomoIG_DN31353_c2_g2_i11
181bp
7464 O_BomoIG12956_5prime_partial:A_BomoIG_DN31353_c2_g2_i11
164bp
7465 O_BomoIG12957_5prime_partial:A_BomoIG_DN31353_c2_g2_i12
169bp
 acylamino-acid-releasing_enzyme_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008236 F serine-type peptidase activity
GO:0008242 F omega peptidase activity
GO:0016787 F hydrolase activity
GO:0031965 C nuclear membrane
GO:0044822 F RNA binding
GO:0050435 P amyloid-beta metabolic process
GO:0070062 C extracellular exosome
7466 O_BomoIG12958_complete:A_BomoIG_DN31353_c2_g4_i8
310bp
7467 O_BomoIG12959_complete:A_BomoIG_DN31353_c2_g4_i8
192bp
7468 O_BomoIG1295_complete:A_BomoIG_DN30202_c7_g3_i2
301bp
 nitric_oxide-associated_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006915 P apoptotic process
GO:0010941 P regulation of cell death
GO:0016020 C membrane
GO:0031314 C extrinsic component of mitochondrial inner membrane
GO:0032543 P mitochondrial translation
GO:0042254 P ribosome biogenesis
GO:0043457 P regulation of cellular respiration
GO:0044822 F RNA binding
7469 O_BomoIG12960_complete:A_BomoIG_DN31353_c2_g4_i8
159bp
 endothelial_zinc_finger_protein_induced_by_tumor_necrosis_factor_alpha-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7470 O_BomoIG12961_5prime_partial:A_BomoIG_DN31353_c2_g6_i3
110bp
previous next from show/104180

- SilkBase 1999-2023 -