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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7351 O_BomoIG12854_3prime_partial:A_BomoIG_DN31365_c2_g5_i3
123bp
 glutamate_receptor_ionotropic,_kainate_2_[Bombyx_mori]
7352 O_BomoIG12855_complete:A_BomoIG_DN31365_c2_g5_i3
119bp
7353 O_BomoIG12856_complete:A_BomoIG_DN31365_c2_g5_i3
112bp
7354 O_BomoIG12857_complete:A_BomoIG_DN31365_c2_g5_i3
101bp
7355 O_BomoIG12858_complete:A_BomoIG_DN31365_c2_g1_i10
613bp
 hormone-sensitive_lipase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0006363 P termination of RNA polymerase I transcription
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016298 F lipase activity
GO:0016787 F hydrolase activity
GO:0019433 P triglyceride catabolic process
GO:0033878 F hormone-sensitive lipase activity
GO:0042134 F rRNA primary transcript binding
7356 O_BomoIG12859_5prime_partial:A_BomoIG_DN31365_c2_g1_i10
109bp
7357 O_BomoIG1285_complete:A_BomoIG_DN30254_c5_g1_i8
153bp
 collagenase_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030574 P collagen catabolic process
7358 O_BomoIG12860_complete:A_BomoIG_DN31365_c2_g1_i10
102bp
7359 O_BomoIG12861_complete:A_BomoIG_DN31365_c2_g5_i4
112bp
7360 O_BomoIG12862_complete:A_BomoIG_DN31365_c2_g3_i6
1868bp
 LOW_QUALITY_PROTEIN:_DNA-directed_RNA_polymerase_II_subunit_RPB1_[Bombyx_mori]
GO:0001055 F RNA polymerase II activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
7361 O_BomoIG12863_complete:A_BomoIG_DN31365_c2_g3_i6
372bp
7362 O_BomoIG12864_complete:A_BomoIG_DN31365_c2_g1_i11
826bp
 hormone-sensitive_lipase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0006363 P termination of RNA polymerase I transcription
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016298 F lipase activity
GO:0016787 F hydrolase activity
GO:0019433 P triglyceride catabolic process
GO:0033878 F hormone-sensitive lipase activity
GO:0042134 F rRNA primary transcript binding
7363 O_BomoIG12865_complete:A_BomoIG_DN31365_c2_g1_i11
102bp
7364 O_BomoIG12866_complete:A_BomoIG_DN31365_c2_g1_i12
148bp
 hormone-sensitive_lipase_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0006363 P termination of RNA polymerase I transcription
GO:0006629 P lipid metabolic process
GO:0007565 P female pregnancy
GO:0008152 P metabolic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016298 F lipase activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0019433 P triglyceride catabolic process
GO:0033878 F hormone-sensitive lipase activity
GO:0042134 F rRNA primary transcript binding
GO:0042493 P response to xenobiotic stimulus
GO:0047372 F acylglycerol lipase activity
7365 O_BomoIG12867_3prime_partial:A_BomoIG_DN31365_c2_g1_i12
117bp
7366 O_BomoIG12868_5prime_partial:A_BomoIG_DN31365_c2_g3_i7
1529bp
 LOW_QUALITY_PROTEIN:_DNA-directed_RNA_polymerase_II_subunit_RPB1_[Bombyx_mori]
GO:0001055 F RNA polymerase II activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
7367 O_BomoIG12869_complete:A_BomoIG_DN31365_c2_g3_i7
375bp
 LOW_QUALITY_PROTEIN:_DNA-directed_RNA_polymerase_II_subunit_RPB1_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0001055 F RNA polymerase II activity
GO:0001172 P transcription, RNA-templated
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005665 C RNA polymerase II, core complex
GO:0005730 C nucleolus
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006353 P DNA-templated transcription, termination
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006370 P 7-methylguanosine mRNA capping
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0010467 P gene expression
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0031047 P gene silencing by RNA
GO:0031625 F ubiquitin protein ligase binding
GO:0033120 P positive regulation of RNA splicing
GO:0035019 P somatic stem cell population maintenance
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0050434 P positive regulation of viral transcription
7368 O_BomoIG1286_complete:A_BomoIG_DN30254_c5_g1_i9
153bp
 collagenase_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030574 P collagen catabolic process
7369 O_BomoIG12870_complete:A_BomoIG_DN31365_c2_g3_i7
372bp
7370 O_BomoIG12871_3prime_partial:A_BomoIG_DN31332_c2_g2_i1
324bp
 E3_ubiquitin-protein_ligase_KCMF1,_partial_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
7371 O_BomoIG12872_5prime_partial:A_BomoIG_DN31332_c2_g2_i1
260bp
7372 O_BomoIG12873_5prime_partial:A_BomoIG_DN31332_c2_g2_i1
147bp
7373 O_BomoIG12874_complete:A_BomoIG_DN31332_c2_g2_i2
265bp
 E3_ubiquitin-protein_ligase_KCMF1,_partial_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
7374 O_BomoIG12875_complete:A_BomoIG_DN31332_c2_g2_i2
177bp
7375 O_BomoIG12876_complete:A_BomoIG_DN31332_c2_g2_i3
197bp
 E3_ubiquitin-protein_ligase_KCMF1,_partial_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
7376 O_BomoIG12877_complete:A_BomoIG_DN31332_c2_g2_i3
101bp
7377 O_BomoIG12878_internal:A_BomoIG_DN31332_c2_g2_i4
120bp
 PREDICTED:_tetratricopeptide_repeat_protein_6_isoform_X1_[Mustela_putorius_furo]
7378 O_BomoIG12879_5prime_partial:A_BomoIG_DN31332_c2_g2_i4
114bp
7379 O_BomoIG1287_complete:A_BomoIG_DN30254_c5_g1_i11
153bp
 collagenase_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030574 P collagen catabolic process
7380 O_BomoIG12880_complete:A_BomoIG_DN31332_c2_g6_i1
255bp
 protein_windbeutel_[Bombyx_mori]
GO:0000042 P protein localization to Golgi apparatus
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006457 P protein folding
GO:0007275 P multicellular organism development
GO:0007313 P maternal specification of dorsal/ventral axis, oocyte, soma encoded
GO:0008063 P Toll signaling pathway
GO:0009306 P protein secretion
GO:0009792 P embryo development ending in birth or egg hatching
GO:0009950 P dorsal/ventral axis specification
GO:0012505 C endomembrane system
GO:0016485 P protein processing
GO:0019233 P sensory perception of pain
GO:0040014 P regulation of multicellular organism growth
GO:0042803 F protein homodimerization activity
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