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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5731 O_BomoIG11396_complete:A_BomoIG_DN31393_c1_g2_i6
371bp
 succinate--CoA_ligase_[GDP-forming]_subunit_beta,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004776 F succinate-CoA ligase (GDP-forming) activity
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005815 C microtubule organizing center
GO:0005886 C plasma membrane
GO:0006099 P tricarboxylic acid cycle
GO:0006104 P succinyl-CoA metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
5732 O_BomoIG11397_complete:A_BomoIG_DN31393_c1_g2_i6
216bp
 hypothetical_protein_AWRI1631_74630_[Saccharomyces_cerevisiae_AWRI1631]
5733 O_BomoIG11398_complete:A_BomoIG_DN31393_c1_g2_i8
371bp
 succinate--CoA_ligase_[GDP-forming]_subunit_beta,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004776 F succinate-CoA ligase (GDP-forming) activity
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005815 C microtubule organizing center
GO:0005886 C plasma membrane
GO:0006099 P tricarboxylic acid cycle
GO:0006104 P succinyl-CoA metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
5734 O_BomoIG11399_complete:A_BomoIG_DN31393_c1_g2_i8
216bp
 hypothetical_protein_AWRI1631_74630_[Saccharomyces_cerevisiae_AWRI1631]
5735 O_BomoIG1139_5prime_partial:A_BomoIG_DN30255_c2_g1_i11
105bp
5736 O_BomoIG113_complete:A_BomoIG_DN30288_c4_g5_i1
409bp
 protein_fuzzy_homolog_isoform_X1_[Bombyx_mori]
GO:0001736 P establishment of planar polarity
GO:0001843 P neural tube closure
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0008589 P regulation of smoothened signaling pathway
GO:0010172 P embryonic body morphogenesis
GO:0015031 P protein transport
GO:0030030 P cell projection organization
GO:0042384 P cilium assembly
GO:0048704 P embryonic skeletal system morphogenesis
5737 O_BomoIG11400_complete:A_BomoIG_DN31393_c1_g2_i9
285bp
 succinate--CoA_ligase_[GDP-forming]_subunit_beta,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004776 F succinate-CoA ligase (GDP-forming) activity
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005815 C microtubule organizing center
GO:0005886 C plasma membrane
GO:0006099 P tricarboxylic acid cycle
GO:0006104 P succinyl-CoA metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
5738 O_BomoIG11401_complete:A_BomoIG_DN31393_c1_g2_i9
150bp
5739 O_BomoIG11402_complete:A_BomoIG_DN31393_c1_g1_i4
266bp
 peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine_amidase_[Bombyx_mori]
GO:0000224 F peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity
GO:0005737 C cytoplasm
GO:0006516 P glycoprotein catabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
5740 O_BomoIG11403_complete:A_BomoIG_DN31393_c1_g2_i11
422bp
 succinate--CoA_ligase_[GDP-forming]_subunit_beta,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004776 F succinate-CoA ligase (GDP-forming) activity
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005815 C microtubule organizing center
GO:0005886 C plasma membrane
GO:0006099 P tricarboxylic acid cycle
GO:0006104 P succinyl-CoA metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
5741 O_BomoIG11404_complete:A_BomoIG_DN31393_c1_g2_i11
216bp
 hypothetical_protein_AWRI1631_74630_[Saccharomyces_cerevisiae_AWRI1631]
5742 O_BomoIG11405_complete:A_BomoIG_DN31393_c1_g2_i13
285bp
 succinate--CoA_ligase_[GDP-forming]_subunit_beta,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004776 F succinate-CoA ligase (GDP-forming) activity
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005815 C microtubule organizing center
GO:0005886 C plasma membrane
GO:0006099 P tricarboxylic acid cycle
GO:0006104 P succinyl-CoA metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
5743 O_BomoIG11406_complete:A_BomoIG_DN31393_c1_g2_i13
150bp
5744 O_BomoIG11407_complete:A_BomoIG_DN31393_c1_g2_i14
133bp
 succinate--CoA_ligase_[GDP-forming]_subunit_beta,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004776 F succinate-CoA ligase (GDP-forming) activity
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0006099 P tricarboxylic acid cycle
GO:0008152 P metabolic process
GO:0016874 F ligase activity
5745 O_BomoIG11408_5prime_partial:A_BomoIG_DN31303_c0_g1_i1
102bp
 hypothetical_protein_RR46_08618_[Papilio_xuthus]
5746 O_BomoIG11409_complete:A_BomoIG_DN31303_c2_g1_i1
160bp
 metal_transporter_CNNM4_[Bombyx_mori]
5747 O_BomoIG1140_complete:A_BomoIG_DN30255_c2_g3_i8
102bp
 uncharacterized_zinc_finger_protein_CG2678_[Bombyx_mori]
5748 O_BomoIG11410_complete:A_BomoIG_DN31303_c5_g2_i1
425bp
 SH3_domain-binding_protein_5_homolog_[Bombyx_mori]
GO:0004860 F protein kinase inhibitor activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007301 P female germline ring canal formation
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0009952 P anterior/posterior pattern specification
GO:0017124 F SH3 domain binding
GO:0035556 P intracellular signal transduction
GO:0042694 P muscle cell fate specification
GO:0048644 P muscle organ morphogenesis
GO:0061099 P negative regulation of protein tyrosine kinase activity
5749 O_BomoIG11411_complete:A_BomoIG_DN31303_c5_g2_i1
101bp
5750 O_BomoIG11412_complete:A_BomoIG_DN31303_c5_g4_i1
326bp
 RNA-binding_protein_42_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002088 P lens development in camera-type eye
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
5751 O_BomoIG11413_complete:A_BomoIG_DN31303_c5_g4_i1
142bp
5752 O_BomoIG11414_complete:A_BomoIG_DN31303_c5_g2_i2
425bp
 SH3_domain-binding_protein_5_homolog_[Bombyx_mori]
GO:0004860 F protein kinase inhibitor activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007301 P female germline ring canal formation
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0009952 P anterior/posterior pattern specification
GO:0017124 F SH3 domain binding
GO:0035556 P intracellular signal transduction
GO:0042694 P muscle cell fate specification
GO:0048644 P muscle organ morphogenesis
GO:0061099 P negative regulation of protein tyrosine kinase activity
5753 O_BomoIG11415_complete:A_BomoIG_DN31303_c5_g2_i2
101bp
5754 O_BomoIG11416_complete:A_BomoIG_DN31303_c5_g4_i2
124bp
 RNA-binding_protein_42_[Bombyx_mori]
5755 O_BomoIG11417_complete:A_BomoIG_DN31303_c5_g4_i2
116bp
5756 O_BomoIG11418_5prime_partial:A_BomoIG_DN31303_c5_g4_i4
206bp
 RNA-binding_protein_42_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
5757 O_BomoIG11419_complete:A_BomoIG_DN31303_c5_g4_i4
142bp
5758 O_BomoIG1141_internal:A_BomoIG_DN30255_c2_g2_i3
521bp
 zinc_finger_protein_235_isoform_X2_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
5759 O_BomoIG11420_5prime_partial:A_BomoIG_DN31303_c5_g2_i3
478bp
 SH3_domain-binding_protein_5_homolog_[Bombyx_mori]
GO:0004860 F protein kinase inhibitor activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007301 P female germline ring canal formation
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0009952 P anterior/posterior pattern specification
GO:0017124 F SH3 domain binding
GO:0035556 P intracellular signal transduction
GO:0042694 P muscle cell fate specification
GO:0048644 P muscle organ morphogenesis
GO:0061099 P negative regulation of protein tyrosine kinase activity
5760 O_BomoIG11421_complete:A_BomoIG_DN31303_c5_g2_i3
101bp
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