SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/104180
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5671 O_BomoIG11341_complete:A_BomoIG_DN31312_c9_g1_i5
827bp
 thyrotropin-releasing_hormone-degrading_ectoenzyme-like_isoform_X1_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0002480 P antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent
GO:0004177 F aminopeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005622 C intracellular anatomical structure
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0007165 P signal transduction
GO:0007267 P cell-cell signaling
GO:0007565 P female pregnancy
GO:0008217 P regulation of blood pressure
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030163 P protein catabolic process
GO:0030659 C cytoplasmic vesicle membrane
GO:0031905 C early endosome lumen
GO:0042277 F peptide binding
GO:0043171 P peptide catabolic process
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0060395 P SMAD protein signal transduction
GO:0061024 P membrane organization
GO:0070006 F metalloaminopeptidase activity
5672 O_BomoIG11342_complete:A_BomoIG_DN31312_c9_g1_i5
269bp
 thyrotropin-releasing_hormone-degrading_ectoenzyme-like_isoform_X2_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0031090 C organelle membrane
GO:0042277 F peptide binding
GO:0043171 P peptide catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0070006 F metalloaminopeptidase activity
5673 O_BomoIG11343_complete:A_BomoIG_DN31312_c9_g1_i5
180bp
5674 O_BomoIG11344_complete:A_BomoIG_DN31312_c9_g1_i5
168bp
5675 O_BomoIG11345_complete:A_BomoIG_DN31312_c9_g1_i5
115bp
5676 O_BomoIG11346_complete:A_BomoIG_DN31312_c9_g1_i6
924bp
 thyrotropin-releasing_hormone-degrading_ectoenzyme-like_isoform_X1_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0002480 P antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent
GO:0004177 F aminopeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005622 C intracellular anatomical structure
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0007165 P signal transduction
GO:0007267 P cell-cell signaling
GO:0007565 P female pregnancy
GO:0008217 P regulation of blood pressure
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030163 P protein catabolic process
GO:0030659 C cytoplasmic vesicle membrane
GO:0031905 C early endosome lumen
GO:0042277 F peptide binding
GO:0043171 P peptide catabolic process
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0060395 P SMAD protein signal transduction
GO:0061024 P membrane organization
GO:0070006 F metalloaminopeptidase activity
5677 O_BomoIG11347_complete:A_BomoIG_DN31312_c9_g1_i6
185bp
 thyrotropin-releasing_hormone-degrading_ectoenzyme-like_isoform_X1_[Bombyx_mori]
5678 O_BomoIG11348_complete:A_BomoIG_DN31312_c9_g1_i6
168bp
5679 O_BomoIG11349_complete:A_BomoIG_DN31312_c9_g1_i6
115bp
5680 O_BomoIG1134_3prime_partial:A_BomoIG_DN30255_c2_g1_i11
506bp
 kinesin-like_protein_Klp68D_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005873 C plus-end kinesin complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007018 P microtubule-based movement
GO:0007608 P sensory perception of smell
GO:0008017 F microtubule binding
GO:0008089 P anterograde axonal transport
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0030951 P establishment or maintenance of microtubule cytoskeleton polarity
GO:1904115 C axon cytoplasm
5681 O_BomoIG11350_complete:A_BomoIG_DN31348_c2_g3_i1
559bp
 angiogenic_factor_with_G_patch_and_FHA_domains_1_isoform_X2_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0003676 F nucleic acid binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045766 P positive regulation of angiogenesis
GO:0048471 C perinuclear region of cytoplasm
5682 O_BomoIG11351_complete:A_BomoIG_DN31348_c2_g6_i1
111bp
5683 O_BomoIG11352_complete:A_BomoIG_DN31348_c2_g3_i2
655bp
 angiogenic_factor_with_G_patch_and_FHA_domains_1_isoform_X1_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001570 P vasculogenesis
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045766 P positive regulation of angiogenesis
GO:0048471 C perinuclear region of cytoplasm
5684 O_BomoIG11353_complete:A_BomoIG_DN31348_c2_g3_i3
410bp
 angiogenic_factor_with_G_patch_and_FHA_domains_1_isoform_X1_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001570 P vasculogenesis
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045766 P positive regulation of angiogenesis
GO:0048471 C perinuclear region of cytoplasm
5685 O_BomoIG11354_complete:A_BomoIG_DN31348_c2_g3_i3
261bp
 angiogenic_factor_with_G_patch_and_FHA_domains_1_isoform_X2_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0003676 F nucleic acid binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045766 P positive regulation of angiogenesis
GO:0048471 C perinuclear region of cytoplasm
5686 O_BomoIG11355_complete:A_BomoIG_DN31348_c2_g3_i4
410bp
 angiogenic_factor_with_G_patch_and_FHA_domains_1_isoform_X1_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001570 P vasculogenesis
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045766 P positive regulation of angiogenesis
GO:0048471 C perinuclear region of cytoplasm
5687 O_BomoIG11356_complete:A_BomoIG_DN31348_c2_g3_i4
145bp
 angiogenic_factor_with_G_patch_and_FHA_domains_1_isoform_X2_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0003676 F nucleic acid binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045766 P positive regulation of angiogenesis
GO:0048471 C perinuclear region of cytoplasm
5688 O_BomoIG11357_3prime_partial:A_BomoIG_DN31348_c2_g10_i1
191bp
 uncharacterized_protein_LOC110380958,_partial_[Helicoverpa_armigera]
5689 O_BomoIG11358_complete:A_BomoIG_DN31348_c2_g10_i1
112bp
5690 O_BomoIG11359_complete:A_BomoIG_DN31382_c3_g3_i1
605bp
 protein_TAPT1_homolog_[Helicoverpa_armigera]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
5691 O_BomoIG1135_complete:A_BomoIG_DN30255_c2_g1_i11
159bp
5692 O_BomoIG11360_3prime_partial:A_BomoIG_DN31382_c3_g5_i1
764bp
 LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0042981 P regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0097190 P apoptotic signaling pathway
5693 O_BomoIG11361_complete:A_BomoIG_DN31382_c3_g5_i1
143bp
5694 O_BomoIG11362_3prime_partial:A_BomoIG_DN31382_c3_g5_i2
756bp
 LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0042981 P regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0097190 P apoptotic signaling pathway
5695 O_BomoIG11363_complete:A_BomoIG_DN31382_c3_g5_i2
143bp
5696 O_BomoIG11364_5prime_partial:A_BomoIG_DN31382_c3_g5_i2
100bp
5697 O_BomoIG11365_3prime_partial:A_BomoIG_DN31382_c3_g4_i3
237bp
 interferon-related_developmental_regulator_2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0014706 P striated muscle tissue development
GO:0030154 P cell differentiation
GO:0030517 P negative regulation of axon extension
GO:0042692 P muscle cell differentiation
GO:0043403 P skeletal muscle tissue regeneration
GO:0048671 P negative regulation of collateral sprouting
5698 O_BomoIG11366_3prime_partial:A_BomoIG_DN31382_c3_g3_i2
226bp
 protein_TAPT1_homolog_[Helicoverpa_armigera]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
5699 O_BomoIG11367_complete:A_BomoIG_DN31382_c3_g5_i3
389bp
 LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0042981 P regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0097190 P apoptotic signaling pathway
5700 O_BomoIG11368_complete:A_BomoIG_DN31382_c3_g6_i1
472bp
 uncharacterized_protein_LOC101739643_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0000792 C heterochromatin
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005721 C pericentric heterochromatin
GO:0006281 P DNA repair
GO:0006334 P nucleosome assembly
GO:0006336 P DNA replication-independent chromatin assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007283 P spermatogenesis
GO:0010571 P positive regulation of nuclear cell cycle DNA replication
GO:0015616 F DNA translocase activity
GO:0016568 P chromatin organization
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0030900 P forebrain development
GO:0031297 P replication fork processing
GO:0031933 C obsolete telomeric heterochromatin
GO:0032206 P positive regulation of telomere maintenance
GO:0035064 F methylated histone binding
GO:0035128 P post-embryonic forelimb morphogenesis
GO:0035264 P multicellular organism growth
GO:0042393 F histone binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0060009 P Sertoli cell development
GO:0070087 F chromo shadow domain binding
GO:0070198 P protein localization to chromosome, telomeric region
GO:0070603 C SWI/SNF superfamily-type complex
GO:0072520 P seminiferous tubule development
GO:0072711 P cellular response to hydroxyurea
GO:1901581 P negative regulation of telomeric RNA transcription from RNA pol II promoter
GO:1901582 P positive regulation of telomeric RNA transcription from RNA pol II promoter
GO:1904908 P negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric
GO:1990707 C chromosome, subtelomeric region
previous next from show/104180

- SilkBase 1999-2023 -