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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4711 O_BomoIG10478_internal:A_BomoIG_DN33743_c4_g1_i8
176bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
4712 O_BomoIG10479_internal:A_BomoIG_DN33743_c4_g1_i9
304bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
4713 O_BomoIG1047_5prime_partial:A_BomoIG_DN30275_c1_g1_i3
154bp
 U1_small_nuclear_ribonucleoprotein_A_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005685 C U1 snRNP
GO:0005686 C U2 snRNP
GO:0006397 P mRNA processing
GO:0007539 P primary sex determination, soma
GO:0008266 F poly(U) RNA binding
GO:0008380 P RNA splicing
GO:0017069 F snRNA binding
GO:0019099 P female germ-line sex determination
GO:0030529 C ribonucleoprotein complex
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0030619 F U1 snRNA binding
GO:0030620 F U2 snRNA binding
GO:0035614 F snRNA stem-loop binding
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0048477 P oogenesis
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0097158 F pre-mRNA intronic pyrimidine-rich binding
4714 O_BomoIG10480_internal:A_BomoIG_DN33743_c4_g1_i10
176bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
4715 O_BomoIG10481_internal:A_BomoIG_DN33743_c4_g1_i11
176bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
4716 O_BomoIG10482_internal:A_BomoIG_DN33743_c4_g1_i12
168bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
4717 O_BomoIG10483_complete:A_BomoIG_DN33743_c4_g1_i13
297bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
4718 O_BomoIG10484_internal:A_BomoIG_DN33743_c4_g1_i14
163bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
4719 O_BomoIG10485_internal:A_BomoIG_DN33743_c4_g1_i15
184bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
4720 O_BomoIG10486_complete:A_BomoIG_DN33775_c1_g1_i1
369bp
 PREDICTED:_uncharacterized_protein_LOC106714598_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
4721 O_BomoIG10487_complete:A_BomoIG_DN33775_c1_g1_i1
174bp
 reverse_transcriptase,_partial_[Operophtera_brumata]
4722 O_BomoIG10488_3prime_partial:A_BomoIG_DN33775_c1_g2_i1
362bp
 reverse_transcriptase_[Operophtera_brumata]
4723 O_BomoIG10489_complete:A_BomoIG_DN33775_c1_g3_i1
116bp
 PREDICTED:_E3_ubiquitin-protein_ligase_RNF181-like_isoform_X2_[Papilio_polytes]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0038018 P Wnt receptor catabolic process
GO:0046872 F metal ion binding
GO:0072089 P stem cell proliferation
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000051 P negative regulation of non-canonical Wnt signaling pathway
4724 O_BomoIG1048_complete:A_BomoIG_DN30275_c1_g1_i3
102bp
4725 O_BomoIG10490_internal:A_BomoIG_DN33775_c1_g1_i2
635bp
 uncharacterized_protein_K02A2.6_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
4726 O_BomoIG10491_complete:A_BomoIG_DN33775_c1_g3_i2
116bp
 PREDICTED:_E3_ubiquitin-protein_ligase_RNF181-like_isoform_X2_[Papilio_polytes]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0038018 P Wnt receptor catabolic process
GO:0046872 F metal ion binding
GO:0072089 P stem cell proliferation
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000051 P negative regulation of non-canonical Wnt signaling pathway
4727 O_BomoIG10492_internal:A_BomoIG_DN33775_c1_g4_i2
323bp
 PREDICTED:_uncharacterized_protein_K02A2.6-like_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
4728 O_BomoIG10493_5prime_partial:A_BomoIG_DN33775_c1_g1_i3
353bp
 PREDICTED:_uncharacterized_protein_K02A2.6-like_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4729 O_BomoIG10494_5prime_partial:A_BomoIG_DN33775_c1_g1_i4
530bp
 PREDICTED:_uncharacterized_protein_K02A2.6-like_[Papilio_xuthus]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
4730 O_BomoIG10495_complete:A_BomoIG_DN33775_c1_g1_i4
136bp
 PREDICTED:_uncharacterized_protein_LOC106714598_[Papilio_machaon]
4731 O_BomoIG10496_5prime_partial:A_BomoIG_DN33775_c1_g1_i5
728bp
 uncharacterized_protein_K02A2.6_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
4732 O_BomoIG10497_complete:A_BomoIG_DN33775_c1_g3_i4
130bp
 PREDICTED:_E3_ubiquitin-protein_ligase_SDIR1-like_isoform_X1_[Papilio_polytes]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0038018 P Wnt receptor catabolic process
GO:0046872 F metal ion binding
GO:0072089 P stem cell proliferation
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000051 P negative regulation of non-canonical Wnt signaling pathway
4733 O_BomoIG10498_5prime_partial:A_BomoIG_DN33775_c1_g1_i6
728bp
 uncharacterized_protein_K02A2.6_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
4734 O_BomoIG10499_complete:A_BomoIG_DN33775_c1_g3_i6
130bp
 PREDICTED:_E3_ubiquitin-protein_ligase_SDIR1-like_isoform_X1_[Papilio_polytes]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0038018 P Wnt receptor catabolic process
GO:0046872 F metal ion binding
GO:0072089 P stem cell proliferation
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000051 P negative regulation of non-canonical Wnt signaling pathway
4735 O_BomoIG1049_complete:A_BomoIG_DN30275_c1_g4_i1
273bp
 uncharacterized_protein_LOC101743387_isoform_X2_[Bombyx_mori]
4736 O_BomoIG104_3prime_partial:A_BomoIG_DN30288_c4_g1_i1
121bp
4737 O_BomoIG10500_complete:A_BomoIG_DN33775_c1_g2_i2
287bp
 reverse_transcriptase_[Operophtera_brumata]
4738 O_BomoIG10501_internal:A_BomoIG_DN33775_c1_g1_i8
115bp
 PREDICTED:_uncharacterized_protein_K02A2.6-like_[Plutella_xylostella]
4739 O_BomoIG10502_complete:A_BomoIG_DN33775_c1_g3_i7
130bp
 PREDICTED:_E3_ubiquitin-protein_ligase_SDIR1-like_isoform_X1_[Papilio_polytes]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0038018 P Wnt receptor catabolic process
GO:0046872 F metal ion binding
GO:0072089 P stem cell proliferation
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000051 P negative regulation of non-canonical Wnt signaling pathway
4740 O_BomoIG10503_complete:A_BomoIG_DN33775_c1_g3_i8
116bp
 PREDICTED:_E3_ubiquitin-protein_ligase_RNF181-like_isoform_X2_[Papilio_polytes]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0038018 P Wnt receptor catabolic process
GO:0046872 F metal ion binding
GO:0072089 P stem cell proliferation
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000051 P negative regulation of non-canonical Wnt signaling pathway
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