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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4441 O_BomoIG103999_5prime_partial:A_BomoIG_DN29855_c6_g5_i4
136bp
4442 O_BomoIG10399_complete:A_BomoIG_DN33701_c3_g6_i1
256bp
 activating_transcription_factor_3_isoform_X1_[Bombyx_mori]
4443 O_BomoIG1039_5prime_partial:A_BomoIG_DN30287_c0_g3_i3
1803bp
 vitellogenin_precursor_[Bombyx_mori]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0006869 P lipid transport
GO:0045735 F nutrient reservoir activity
4444 O_BomoIG103_5prime_partial:A_BomoIG_DN30288_c4_g1_i1
125bp
4445 O_BomoIG104000_complete:A_BomoIG_DN29855_c6_g3_i4
295bp
 uncharacterized_protein_LOC101738342_[Bombyx_mori]
4446 O_BomoIG104001_complete:A_BomoIG_DN29855_c6_g3_i4
148bp
4447 O_BomoIG104002_complete:A_BomoIG_DN29855_c6_g3_i4
145bp
4448 O_BomoIG104003_5prime_partial:A_BomoIG_DN29855_c6_g5_i5
111bp
4449 O_BomoIG104004_5prime_partial:A_BomoIG_DN29855_c6_g5_i6
282bp
 uncharacterized_protein_LOC101743057_[Bombyx_mori]
4450 O_BomoIG104005_5prime_partial:A_BomoIG_DN29855_c6_g5_i6
136bp
4451 O_BomoIG104006_5prime_partial:A_BomoIG_DN29855_c6_g4_i5
105bp
4452 O_BomoIG104007_3prime_partial:A_BomoIG_DN29826_c0_g1_i1
180bp
 uncharacterized_protein_LOC101741660_[Bombyx_mori]
4453 O_BomoIG104008_internal:A_BomoIG_DN29826_c0_g1_i2
189bp
 uncharacterized_protein_LOC101741660_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0006355 P regulation of transcription, DNA-templated
GO:0017025 F TBP-class protein binding
GO:0043966 P histone H3 acetylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0072686 C mitotic spindle
4454 O_BomoIG104009_3prime_partial:A_BomoIG_DN29826_c0_g1_i3
786bp
 uncharacterized_protein_LOC101741660_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0006355 P regulation of transcription, DNA-templated
GO:0017025 F TBP-class protein binding
GO:0043966 P histone H3 acetylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0072686 C mitotic spindle
4455 O_BomoIG10400_3prime_partial:A_BomoIG_DN33701_c3_g6_i2
292bp
 activating_transcription_factor_3_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000982 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006094 P gluconeogenesis
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0010628 P positive regulation of gene expression
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0034198 P cellular response to amino acid starvation
GO:0035914 P skeletal muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
GO:1903984 P positive regulation of TRAIL-activated apoptotic signaling pathway
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
GO:1990622 C CHOP-ATF3 complex
4456 O_BomoIG104010_complete:A_BomoIG_DN29826_c0_g1_i3
163bp
4457 O_BomoIG104011_complete:A_BomoIG_DN29826_c0_g1_i3
114bp
4458 O_BomoIG104012_3prime_partial:A_BomoIG_DN29826_c0_g1_i4
591bp
 uncharacterized_protein_LOC101741660_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0006355 P regulation of transcription, DNA-templated
GO:0017025 F TBP-class protein binding
GO:0043966 P histone H3 acetylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0072686 C mitotic spindle
4459 O_BomoIG104013_complete:A_BomoIG_DN29826_c0_g1_i4
105bp
4460 O_BomoIG104014_3prime_partial:A_BomoIG_DN29836_c2_g5_i1
109bp
4461 O_BomoIG104015_3prime_partial:A_BomoIG_DN29836_c2_g8_i1
192bp
 rab_GTPase-binding_effector_protein_1_isoform_X3_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0008083 F growth factor activity
GO:0015031 P protein transport
GO:0016023 C cytoplasmic vesicle
GO:0016192 P vesicle-mediated transport
GO:0030139 C endocytic vesicle
GO:0031410 C cytoplasmic vesicle
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0043547 P positive regulation of GTPase activity
GO:0055037 C recycling endosome
4462 O_BomoIG104016_complete:A_BomoIG_DN29836_c2_g8_i1
107bp
4463 O_BomoIG104017_internal:A_BomoIG_DN29836_c2_g8_i2
238bp
 rab_GTPase-binding_effector_protein_1_isoform_X3_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0008083 F growth factor activity
GO:0015031 P protein transport
GO:0016023 C cytoplasmic vesicle
GO:0016192 P vesicle-mediated transport
GO:0030139 C endocytic vesicle
GO:0031410 C cytoplasmic vesicle
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0043547 P positive regulation of GTPase activity
GO:0055037 C recycling endosome
4464 O_BomoIG104018_complete:A_BomoIG_DN29836_c2_g8_i2
136bp
4465 O_BomoIG104019_complete:A_BomoIG_DN29836_c2_g11_i1
138bp
 lysozyme_precursor_[Bombyx_mori]
GO:0003796 F lysozyme activity
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0019835 P cytolysis
GO:0042742 P defense response to bacterium
4466 O_BomoIG10401_complete:A_BomoIG_DN33701_c3_g6_i3
120bp
 activating_transcription_factor_3_isoform_X2_[Bombyx_mori]
4467 O_BomoIG104020_complete:A_BomoIG_DN29836_c2_g11_i2
138bp
 lysozyme_precursor_[Bombyx_mori]
GO:0003796 F lysozyme activity
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0019835 P cytolysis
GO:0042742 P defense response to bacterium
4468 O_BomoIG104021_5prime_partial:A_BomoIG_DN29836_c2_g8_i4
174bp
 rab_GTPase-binding_effector_protein_1_isoform_X3_[Bombyx_mori]
4469 O_BomoIG104022_5prime_partial:A_BomoIG_DN29871_c5_g9_i1
488bp
 saccharopine_dehydrogenase-like_oxidoreductase_[Bombyx_mori]
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
4470 O_BomoIG104023_complete:A_BomoIG_DN29871_c5_g9_i1
272bp
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