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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4381 O_BomoIG103944_complete:A_BomoIG_DN29854_c3_g4_i5
119bp
4382 O_BomoIG103945_complete:A_BomoIG_DN29854_c3_g4_i6
184bp
4383 O_BomoIG103946_complete:A_BomoIG_DN29854_c3_g4_i7
359bp
 homeodomain-interacting_protein_kinase_2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001105 F transcription coactivator activity
GO:0001934 P positive regulation of protein phosphorylation
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0006978 P DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007224 P smoothened signaling pathway
GO:0007628 P adult walking behavior
GO:0008284 P positive regulation of cell population proliferation
GO:0008344 P adult locomotory behavior
GO:0009952 P anterior/posterior pattern specification
GO:0010842 P retina layer formation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016604 C nuclear body
GO:0016605 C PML body
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0030182 P neuron differentiation
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0030514 P negative regulation of BMP signaling pathway
GO:0032092 P positive regulation of protein binding
GO:0042771 P intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0043388 P positive regulation of DNA binding
GO:0043524 P negative regulation of neuron apoptotic process
GO:0045766 P positive regulation of angiogenesis
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046330 P positive regulation of JNK cascade
GO:0046332 F SMAD binding
GO:0046790 F virion binding
GO:0048596 P embryonic camera-type eye morphogenesis
GO:0050882 P voluntary musculoskeletal movement
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0060059 P embryonic retina morphogenesis in camera-type eye
GO:0060235 P lens induction in camera-type eye
GO:0060395 P SMAD protein signal transduction
GO:0061072 P iris morphogenesis
GO:0090575 C RNA polymerase II transcription regulator complex
4384 O_BomoIG103947_complete:A_BomoIG_DN29854_c3_g4_i7
119bp
4385 O_BomoIG103948_complete:A_BomoIG_DN29854_c3_g2_i4
240bp
 protein_SDE2_homolog_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
4386 O_BomoIG103949_complete:A_BomoIG_DN29854_c3_g4_i8
184bp
4387 O_BomoIG10394_5prime_partial:A_BomoIG_DN33748_c0_g1_i5
464bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
4388 O_BomoIG103950_5prime_partial:A_BomoIG_DN29854_c3_g2_i5
105bp
 uncharacterized_protein_LOC101740587_isoform_X2_[Bombyx_mori]
4389 O_BomoIG103951_3prime_partial:A_BomoIG_DN29854_c3_g4_i9
668bp
 homeodomain-interacting_protein_kinase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
4390 O_BomoIG103952_5prime_partial:A_BomoIG_DN29854_c3_g4_i9
137bp
4391 O_BomoIG103953_complete:A_BomoIG_DN29854_c3_g4_i9
119bp
4392 O_BomoIG103954_3prime_partial:A_BomoIG_DN29854_c3_g4_i10
390bp
 homeodomain-interacting_protein_kinase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
4393 O_BomoIG103955_5prime_partial:A_BomoIG_DN29854_c3_g4_i10
137bp
4394 O_BomoIG103956_complete:A_BomoIG_DN29854_c3_g4_i10
119bp
4395 O_BomoIG103957_3prime_partial:A_BomoIG_DN29854_c3_g4_i11
658bp
 homeodomain-interacting_protein_kinase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
4396 O_BomoIG103958_5prime_partial:A_BomoIG_DN29854_c3_g4_i11
137bp
4397 O_BomoIG103959_complete:A_BomoIG_DN29854_c3_g4_i11
119bp
4398 O_BomoIG10395_5prime_partial:A_BomoIG_DN33748_c0_g1_i8
778bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
4399 O_BomoIG103960_3prime_partial:A_BomoIG_DN29854_c3_g4_i12
338bp
 homeodomain-interacting_protein_kinase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
4400 O_BomoIG103961_5prime_partial:A_BomoIG_DN29854_c3_g4_i12
137bp
4401 O_BomoIG103962_complete:A_BomoIG_DN29854_c3_g2_i6
240bp
 protein_SDE2_homolog_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
4402 O_BomoIG103963_3prime_partial:A_BomoIG_DN29854_c3_g4_i14
390bp
 homeodomain-interacting_protein_kinase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
4403 O_BomoIG103964_5prime_partial:A_BomoIG_DN29854_c3_g4_i14
137bp
4404 O_BomoIG103965_complete:A_BomoIG_DN29854_c3_g4_i14
119bp
4405 O_BomoIG103966_3prime_partial:A_BomoIG_DN29854_c3_g4_i15
194bp
 homeodomain-interacting_protein_kinase_2_[Bombyx_mori]
4406 O_BomoIG103967_complete:A_BomoIG_DN29854_c3_g4_i15
166bp
4407 O_BomoIG103968_complete:A_BomoIG_DN29854_c3_g4_i16
222bp
 homeodomain-interacting_protein_kinase_2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001105 F transcription coactivator activity
GO:0001654 P eye development
GO:0001934 P positive regulation of protein phosphorylation
GO:0003714 F transcription corepressor activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0006978 P DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007224 P smoothened signaling pathway
GO:0007628 P adult walking behavior
GO:0008284 P positive regulation of cell population proliferation
GO:0008344 P adult locomotory behavior
GO:0009952 P anterior/posterior pattern specification
GO:0010842 P retina layer formation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016604 C nuclear body
GO:0016605 C PML body
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0019048 P modulation by virus of host process
GO:0030182 P neuron differentiation
GO:0030218 P erythrocyte differentiation
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0030514 P negative regulation of BMP signaling pathway
GO:0030578 P PML body organization
GO:0032092 P positive regulation of protein binding
GO:0042771 P intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0043388 P positive regulation of DNA binding
GO:0043524 P negative regulation of neuron apoptotic process
GO:0045766 P positive regulation of angiogenesis
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046330 P positive regulation of JNK cascade
GO:0046332 F SMAD binding
GO:0046790 F virion binding
GO:0048596 P embryonic camera-type eye morphogenesis
GO:0050882 P voluntary musculoskeletal movement
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0051726 P regulation of cell cycle
GO:0060059 P embryonic retina morphogenesis in camera-type eye
GO:0060235 P lens induction in camera-type eye
GO:0060395 P SMAD protein signal transduction
GO:0061072 P iris morphogenesis
GO:0071456 P cellular response to hypoxia
GO:0090575 C RNA polymerase II transcription regulator complex
GO:0097193 P intrinsic apoptotic signaling pathway
GO:1901796 P regulation of signal transduction by p53 class mediator
4408 O_BomoIG103969_3prime_partial:A_BomoIG_DN29854_c3_g4_i17
521bp
 homeodomain-interacting_protein_kinase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
4409 O_BomoIG10396_5prime_partial:A_BomoIG_DN33748_c0_g1_i9
425bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
4410 O_BomoIG103970_5prime_partial:A_BomoIG_DN29854_c3_g4_i17
137bp
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