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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4321 O_BomoIG103890_complete:A_BomoIG_DN29802_c0_g1_i15
158bp
4322 O_BomoIG103891_complete:A_BomoIG_DN29802_c0_g1_i16
620bp
 uncharacterized_protein_LOC101737214_isoform_X4_[Bombyx_mori]
4323 O_BomoIG103892_complete:A_BomoIG_DN29802_c0_g1_i16
158bp
4324 O_BomoIG103893_5prime_partial:A_BomoIG_DN29802_c0_g1_i17
239bp
 uncharacterized_protein_LOC101737214_isoform_X5_[Bombyx_mori]
4325 O_BomoIG103894_complete:A_BomoIG_DN29802_c0_g1_i17
129bp
4326 O_BomoIG103895_complete:A_BomoIG_DN29848_c1_g2_i3
164bp
 tRNA-specific_adenosine_deaminase_2_[Bombyx_mori]
GO:0002100 P tRNA wobble adenosine to inosine editing
GO:0003824 F catalytic activity
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008251 F tRNA-specific adenosine deaminase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0052717 F tRNA-specific adenosine-34 deaminase activity
GO:0052718 C tRNA-specific adenosine-34 deaminase complex
4327 O_BomoIG103896_complete:A_BomoIG_DN29848_c1_g2_i6
164bp
 tRNA-specific_adenosine_deaminase_2_[Bombyx_mori]
GO:0002100 P tRNA wobble adenosine to inosine editing
GO:0003824 F catalytic activity
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008251 F tRNA-specific adenosine deaminase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0052717 F tRNA-specific adenosine-34 deaminase activity
GO:0052718 C tRNA-specific adenosine-34 deaminase complex
4328 O_BomoIG103897_complete:A_BomoIG_DN29848_c1_g2_i6
105bp
 single-strand_selective_monofunctional_uracil-DNA_glycosylase_[Bombyx_mori]
GO:0000702 F oxidized base lesion DNA N-glycosylase activity
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004844 F uracil DNA N-glycosylase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0017065 F single-strand selective uracil DNA N-glycosylase activity
GO:0019104 F DNA N-glycosylase activity
GO:0031981 C nuclear lumen
4329 O_BomoIG103898_complete:A_BomoIG_DN29848_c1_g2_i8
164bp
 tRNA-specific_adenosine_deaminase_2_[Bombyx_mori]
GO:0002100 P tRNA wobble adenosine to inosine editing
GO:0003824 F catalytic activity
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008251 F tRNA-specific adenosine deaminase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0052717 F tRNA-specific adenosine-34 deaminase activity
GO:0052718 C tRNA-specific adenosine-34 deaminase complex
4330 O_BomoIG103899_complete:A_BomoIG_DN29848_c1_g2_i8
105bp
 single-strand_selective_monofunctional_uracil-DNA_glycosylase_[Bombyx_mori]
GO:0000702 F oxidized base lesion DNA N-glycosylase activity
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004844 F uracil DNA N-glycosylase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0017065 F single-strand selective uracil DNA N-glycosylase activity
GO:0019104 F DNA N-glycosylase activity
GO:0031981 C nuclear lumen
4331 O_BomoIG10389_5prime_partial:A_BomoIG_DN33710_c0_g2_i7
101bp
 uncharacterized_protein_LOC101741134_[Bombyx_mori]
4332 O_BomoIG1038_complete:A_BomoIG_DN30287_c0_g1_i6
290bp
4333 O_BomoIG103900_complete:A_BomoIG_DN29848_c1_g1_i2
102bp
4334 O_BomoIG103901_complete:A_BomoIG_DN29861_c0_g1_i1
185bp
 inhibitor_of_growth_protein_3_[Bombyx_mori]
GO:0000812 C Swr1 complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0032777 C Piccolo NuA4 histone acetyltransferase complex
GO:0035064 F methylated histone binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043065 P positive regulation of apoptotic process
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0046872 F metal ion binding
4335 O_BomoIG103902_complete:A_BomoIG_DN29861_c0_g1_i2
361bp
 inhibitor_of_growth_protein_3_[Bombyx_mori]
GO:0000812 C Swr1 complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0032777 C Piccolo NuA4 histone acetyltransferase complex
GO:0035064 F methylated histone binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043065 P positive regulation of apoptotic process
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0046872 F metal ion binding
4336 O_BomoIG103903_complete:A_BomoIG_DN29861_c0_g1_i3
224bp
 inhibitor_of_growth_protein_3_[Bombyx_mori]
GO:0000812 C Swr1 complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0032777 C Piccolo NuA4 histone acetyltransferase complex
GO:0035064 F methylated histone binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043065 P positive regulation of apoptotic process
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0046872 F metal ion binding
4337 O_BomoIG103904_complete:A_BomoIG_DN29861_c0_g1_i3
104bp
 inhibitor_of_growth_protein_3_[Bombyx_mori]
GO:0000812 C Swr1 complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0032777 C Piccolo NuA4 histone acetyltransferase complex
GO:0035064 F methylated histone binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043065 P positive regulation of apoptotic process
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0046872 F metal ion binding
4338 O_BomoIG103905_complete:A_BomoIG_DN29861_c0_g1_i4
185bp
 inhibitor_of_growth_protein_3_[Bombyx_mori]
GO:0000812 C Swr1 complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0032777 C Piccolo NuA4 histone acetyltransferase complex
GO:0035064 F methylated histone binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043065 P positive regulation of apoptotic process
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0046872 F metal ion binding
4339 O_BomoIG103906_complete:A_BomoIG_DN29861_c0_g1_i4
184bp
 inhibitor_of_growth_protein_3_[Bombyx_mori]
GO:0000812 C Swr1 complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0040008 P regulation of growth
GO:0043065 P positive regulation of apoptotic process
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0046872 F metal ion binding
4340 O_BomoIG103907_complete:A_BomoIG_DN29861_c0_g1_i5
367bp
 inhibitor_of_growth_protein_3_[Bombyx_mori]
GO:0000812 C Swr1 complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0032777 C Piccolo NuA4 histone acetyltransferase complex
GO:0035064 F methylated histone binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043065 P positive regulation of apoptotic process
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0046872 F metal ion binding
4341 O_BomoIG103908_complete:A_BomoIG_DN29861_c0_g1_i6
387bp
 inhibitor_of_growth_protein_3_[Bombyx_mori]
GO:0000812 C Swr1 complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0032777 C Piccolo NuA4 histone acetyltransferase complex
GO:0035064 F methylated histone binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043065 P positive regulation of apoptotic process
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0046872 F metal ion binding
4342 O_BomoIG103909_complete:A_BomoIG_DN29861_c0_g1_i7
361bp
 inhibitor_of_growth_protein_3_[Bombyx_mori]
GO:0000812 C Swr1 complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0032777 C Piccolo NuA4 histone acetyltransferase complex
GO:0035064 F methylated histone binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043065 P positive regulation of apoptotic process
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0046872 F metal ion binding
4343 O_BomoIG10390_complete:A_BomoIG_DN33748_c0_g1_i1
118bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
4344 O_BomoIG103910_complete:A_BomoIG_DN29861_c0_g1_i8
396bp
 inhibitor_of_growth_protein_3_[Bombyx_mori]
GO:0000812 C Swr1 complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0032777 C Piccolo NuA4 histone acetyltransferase complex
GO:0035064 F methylated histone binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043065 P positive regulation of apoptotic process
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0046872 F metal ion binding
4345 O_BomoIG103911_complete:A_BomoIG_DN29861_c0_g1_i9
224bp
 inhibitor_of_growth_protein_3_[Bombyx_mori]
GO:0000812 C Swr1 complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0032777 C Piccolo NuA4 histone acetyltransferase complex
GO:0035064 F methylated histone binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043065 P positive regulation of apoptotic process
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0046872 F metal ion binding
4346 O_BomoIG103912_complete:A_BomoIG_DN29861_c0_g1_i10
207bp
 inhibitor_of_growth_protein_3_[Bombyx_mori]
GO:0000812 C Swr1 complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0032777 C Piccolo NuA4 histone acetyltransferase complex
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043065 P positive regulation of apoptotic process
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0046872 F metal ion binding
4347 O_BomoIG103913_3prime_partial:A_BomoIG_DN29873_c0_g1_i1
345bp
 acidic_leucine-rich_nuclear_phosphoprotein_32_family_member_A_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005875 C microtubule associated complex
GO:0006913 P nucleocytoplasmic transport
GO:0007017 P microtubule-based process
GO:0008017 F microtubule binding
GO:0019212 F phosphatase inhibitor activity
GO:0043086 P negative regulation of catalytic activity
GO:0048471 C perinuclear region of cytoplasm
4348 O_BomoIG103914_complete:A_BomoIG_DN29873_c0_g1_i1
149bp
4349 O_BomoIG103915_3prime_partial:A_BomoIG_DN29873_c0_g1_i1
126bp
4350 O_BomoIG103916_complete:A_BomoIG_DN29873_c0_g1_i1
113bp
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