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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3511 O_BomoIG103160_complete:A_BomoIG_DN29853_c2_g1_i13
122bp
 sorting_nexin-4_[Bombyx_mori]
GO:0005154 F epidermal growth factor receptor binding
GO:0005158 F insulin receptor binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005868 C cytoplasmic dynein complex
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016050 P vesicle organization
GO:0019898 C extrinsic component of membrane
GO:0031201 C SNARE complex
GO:0031901 C early endosome membrane
GO:0032456 P endocytic recycling
GO:0035091 F phosphatidylinositol binding
GO:0043234 C protein-containing complex
GO:1903595 P positive regulation of histamine secretion by mast cell
GO:1990459 F transferrin receptor binding
GO:1990460 F leptin receptor binding
3512 O_BomoIG103161_3prime_partial:A_BomoIG_DN29853_c2_g4_i1
417bp
 PREDICTED:_uncharacterized_protein_LOC105386002_isoform_X2_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004533 F exoribonuclease H activity
GO:0005198 F structural molecule activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0019028 C viral capsid
GO:0019076 P viral release from host cell
GO:0020002 C host cell plasma membrane
GO:0030430 C host cell cytoplasm
GO:0033644 C host cell membrane
GO:0039657 P suppression by virus of host gene expression
GO:0042025 C host cell nucleus
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
3513 O_BomoIG103162_5prime_partial:A_BomoIG_DN29853_c2_g4_i1
109bp
 uncharacterized_protein_LOC110385376_[Bombyx_mori]
3514 O_BomoIG103163_complete:A_BomoIG_DN29804_c3_g1_i1
115bp
Uncharacterized_protein_OBRU01_10435_[Operophtera_brumata]
3515 O_BomoIG103164_5prime_partial:A_BomoIG_DN29804_c3_g2_i1
320bp
 uncharacterized_protein_K02A2.6_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
3516 O_BomoIG103165_complete:A_BomoIG_DN29804_c5_g1_i1
297bp
 mitochondrial_chaperone_BCS1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005750 C mitochondrial respiratory chain complex III
GO:0007005 P mitochondrion organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0033617 P mitochondrial cytochrome c oxidase assembly
GO:0034551 P mitochondrial respiratory chain complex III assembly
3517 O_BomoIG103166_complete:A_BomoIG_DN29804_c5_g1_i2
425bp
 mitochondrial_chaperone_BCS1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005750 C mitochondrial respiratory chain complex III
GO:0007005 P mitochondrion organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0033617 P mitochondrial cytochrome c oxidase assembly
GO:0034551 P mitochondrial respiratory chain complex III assembly
3518 O_BomoIG103167_complete:A_BomoIG_DN29804_c5_g1_i3
181bp
 mitochondrial_chaperone_BCS1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005750 C mitochondrial respiratory chain complex III
GO:0007005 P mitochondrion organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0033617 P mitochondrial cytochrome c oxidase assembly
GO:0034551 P mitochondrial respiratory chain complex III assembly
3519 O_BomoIG103168_complete:A_BomoIG_DN29804_c5_g1_i3
128bp
 mitochondrial_chaperone_BCS1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034551 P mitochondrial respiratory chain complex III assembly
3520 O_BomoIG103169_complete:A_BomoIG_DN29804_c5_g1_i4
280bp
 mitochondrial_chaperone_BCS1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034551 P mitochondrial respiratory chain complex III assembly
3521 O_BomoIG10316_5prime_partial:A_BomoIG_DN33768_c2_g5_i1
328bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
3522 O_BomoIG103170_complete:A_BomoIG_DN29804_c5_g1_i6
326bp
 mitochondrial_chaperone_BCS1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005750 C mitochondrial respiratory chain complex III
GO:0007005 P mitochondrion organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0033617 P mitochondrial cytochrome c oxidase assembly
GO:0034551 P mitochondrial respiratory chain complex III assembly
3523 O_BomoIG103171_complete:A_BomoIG_DN29804_c5_g1_i6
128bp
 mitochondrial_chaperone_BCS1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034551 P mitochondrial respiratory chain complex III assembly
3524 O_BomoIG103172_complete:A_BomoIG_DN29804_c5_g1_i7
297bp
 mitochondrial_chaperone_BCS1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005750 C mitochondrial respiratory chain complex III
GO:0007005 P mitochondrion organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0033617 P mitochondrial cytochrome c oxidase assembly
GO:0034551 P mitochondrial respiratory chain complex III assembly
3525 O_BomoIG103173_complete:A_BomoIG_DN29804_c5_g1_i7
100bp
3526 O_BomoIG103174_complete:A_BomoIG_DN29872_c2_g2_i1
134bp
 uncharacterized_protein_LOC101741272_[Bombyx_mori]
3527 O_BomoIG103175_complete:A_BomoIG_DN29872_c2_g3_i1
150bp
 putative_deoxynucleoside_kinase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004797 F thymidine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006165 P nucleoside diphosphate phosphorylation
GO:0006230 P TMP biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019136 F deoxynucleoside kinase activity
GO:0019206 F nucleoside kinase activity
GO:0046939 P nucleotide phosphorylation
GO:0071897 P DNA biosynthetic process
3528 O_BomoIG103176_complete:A_BomoIG_DN29872_c2_g3_i1
103bp
3529 O_BomoIG103177_3prime_partial:A_BomoIG_DN29872_c2_g3_i1
100bp
3530 O_BomoIG103178_complete:A_BomoIG_DN29872_c2_g3_i2
195bp
 putative_deoxynucleoside_kinase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004797 F thymidine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006165 P nucleoside diphosphate phosphorylation
GO:0006230 P TMP biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019136 F deoxynucleoside kinase activity
GO:0019206 F nucleoside kinase activity
GO:0046939 P nucleotide phosphorylation
GO:0071897 P DNA biosynthetic process
3531 O_BomoIG103179_complete:A_BomoIG_DN29872_c2_g3_i2
138bp
3532 O_BomoIG10317_complete:A_BomoIG_DN33768_c2_g2_i2
111bp
 fringe_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001708 P cell fate specification
GO:0001745 P compound eye morphogenesis
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005797 C Golgi medial cisterna
GO:0006004 P fucose metabolic process
GO:0006493 P protein O-linked glycosylation
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007389 P pattern specification process
GO:0007450 P dorsal/ventral pattern formation, imaginal disc
GO:0007451 P dorsal/ventral lineage restriction, imaginal disc
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008194 F UDP-glycosyltransferase activity
GO:0008375 F acetylglucosaminyltransferase activity
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0008593 P regulation of Notch signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030173 C integral component of Golgi membrane
GO:0033829 F O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity
GO:0035017 P cuticle pattern formation
GO:0036011 P imaginal disc-derived leg segmentation
GO:0036099 P female germ-line stem cell population maintenance
GO:0045746 P negative regulation of Notch signaling pathway
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046872 F metal ion binding
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048477 P oogenesis
GO:0048749 P compound eye development
3533 O_BomoIG103180_3prime_partial:A_BomoIG_DN29872_c2_g3_i2
100bp
3534 O_BomoIG103181_complete:A_BomoIG_DN29872_c2_g1_i2
383bp
 26S_proteasome_non-ATPase_regulatory_subunit_6_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000209 P protein polyubiquitination
GO:0000502 C proteasome complex
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0002479 P antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0005838 C proteasome regulatory particle
GO:0006508 P proteolysis
GO:0006521 P regulation of cellular amino acid metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0022624 C proteasome accessory complex
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0038061 P NIK/NF-kappaB signaling
GO:0038095 P Fc-epsilon receptor signaling pathway
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043488 P regulation of mRNA stability
GO:0050852 P T cell receptor signaling pathway
GO:0051436 P obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 P obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
GO:0060071 P Wnt signaling pathway, planar cell polarity pathway
GO:0070062 C extracellular exosome
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0090263 P positive regulation of canonical Wnt signaling pathway
3535 O_BomoIG103182_complete:A_BomoIG_DN29872_c2_g3_i4
195bp
 putative_deoxynucleoside_kinase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004797 F thymidine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006165 P nucleoside diphosphate phosphorylation
GO:0006230 P TMP biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019136 F deoxynucleoside kinase activity
GO:0019206 F nucleoside kinase activity
GO:0046939 P nucleotide phosphorylation
GO:0071897 P DNA biosynthetic process
3536 O_BomoIG103183_complete:A_BomoIG_DN29872_c2_g3_i4
138bp
3537 O_BomoIG103184_5prime_partial:A_BomoIG_DN29872_c2_g2_i2
223bp
 uncharacterized_protein_LOC101741272_[Bombyx_mori]
3538 O_BomoIG103185_complete:A_BomoIG_DN29872_c2_g1_i3
383bp
 26S_proteasome_non-ATPase_regulatory_subunit_6_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000209 P protein polyubiquitination
GO:0000502 C proteasome complex
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0002479 P antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0005838 C proteasome regulatory particle
GO:0006508 P proteolysis
GO:0006521 P regulation of cellular amino acid metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0022624 C proteasome accessory complex
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0038061 P NIK/NF-kappaB signaling
GO:0038095 P Fc-epsilon receptor signaling pathway
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043488 P regulation of mRNA stability
GO:0050852 P T cell receptor signaling pathway
GO:0051436 P obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 P obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
GO:0060071 P Wnt signaling pathway, planar cell polarity pathway
GO:0070062 C extracellular exosome
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0090263 P positive regulation of canonical Wnt signaling pathway
3539 O_BomoIG103186_complete:A_BomoIG_DN29872_c2_g3_i5
150bp
 putative_deoxynucleoside_kinase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004797 F thymidine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006165 P nucleoside diphosphate phosphorylation
GO:0006230 P TMP biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019136 F deoxynucleoside kinase activity
GO:0019206 F nucleoside kinase activity
GO:0046939 P nucleotide phosphorylation
GO:0071897 P DNA biosynthetic process
3540 O_BomoIG103187_complete:A_BomoIG_DN29872_c2_g3_i5
103bp
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