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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3451 O_BomoIG103106_3prime_partial:A_BomoIG_DN29867_c0_g1_i5
730bp
 kinesin-like_protein_CG14535_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0007018 P microtubule-based movement
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0008104 P protein localization
GO:0008574 F plus-end-directed microtubule motor activity
GO:0016887 F ATP hydrolysis activity
GO:0030705 P cytoskeleton-dependent intracellular transport
GO:0048812 P neuron projection morphogenesis
3452 O_BomoIG103107_5prime_partial:A_BomoIG_DN29842_c0_g5_i1
827bp
 probable_ATP-dependent_RNA_helicase_DDX10_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
3453 O_BomoIG103108_internal:A_BomoIG_DN29842_c0_g5_i2
698bp
 probable_ATP-dependent_RNA_helicase_DDX10_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
3454 O_BomoIG103109_5prime_partial:A_BomoIG_DN29842_c0_g5_i2
103bp
3455 O_BomoIG10310_5prime_partial:A_BomoIG_DN33790_c2_g3_i3
353bp
 E3_ubiquitin-protein_ligase_TRIM33_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030218 P erythrocyte differentiation
GO:0033333 P fin development
GO:0034243 P regulation of transcription elongation from RNA polymerase II promoter
GO:0035162 P embryonic hemopoiesis
GO:0035166 P post-embryonic hemopoiesis
GO:0046872 F metal ion binding
GO:0060215 P primitive hemopoiesis
3456 O_BomoIG103110_3prime_partial:A_BomoIG_DN29800_c0_g1_i1
507bp
 very_long-chain-fatty-acid--CoA_ligase_bubblegum_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
3457 O_BomoIG103111_complete:A_BomoIG_DN29800_c0_g1_i1
109bp
3458 O_BomoIG103112_3prime_partial:A_BomoIG_DN29800_c0_g1_i2
489bp
 very_long-chain-fatty-acid--CoA_ligase_bubblegum_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
3459 O_BomoIG103113_complete:A_BomoIG_DN29800_c0_g1_i2
109bp
3460 O_BomoIG103114_3prime_partial:A_BomoIG_DN29800_c0_g1_i4
467bp
 very_long-chain-fatty-acid--CoA_ligase_bubblegum_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
3461 O_BomoIG103115_complete:A_BomoIG_DN29800_c0_g1_i4
109bp
3462 O_BomoIG103116_5prime_partial:A_BomoIG_DN29800_c0_g2_i4
200bp
 very_long-chain-fatty-acid--CoA_ligase_bubblegum_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
3463 O_BomoIG103117_3prime_partial:A_BomoIG_DN29800_c0_g1_i5
529bp
 very_long-chain-fatty-acid--CoA_ligase_bubblegum_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
3464 O_BomoIG103118_complete:A_BomoIG_DN29800_c0_g1_i5
109bp
3465 O_BomoIG103119_5prime_partial:A_BomoIG_DN29800_c0_g2_i6
185bp
 very_long-chain-fatty-acid--CoA_ligase_bubblegum_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
3466 O_BomoIG10311_complete:A_BomoIG_DN33790_c2_g3_i3
211bp
3467 O_BomoIG103120_3prime_partial:A_BomoIG_DN29800_c0_g1_i6
505bp
 very_long-chain-fatty-acid--CoA_ligase_bubblegum_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
3468 O_BomoIG103121_complete:A_BomoIG_DN29800_c0_g1_i6
109bp
3469 O_BomoIG103122_3prime_partial:A_BomoIG_DN29800_c0_g1_i7
487bp
 very_long-chain-fatty-acid--CoA_ligase_bubblegum_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
3470 O_BomoIG103123_complete:A_BomoIG_DN29800_c0_g1_i7
109bp
3471 O_BomoIG103124_3prime_partial:A_BomoIG_DN29800_c0_g1_i8
121bp
 very_long-chain-fatty-acid--CoA_ligase_bubblegum_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
GO:0034976 P response to endoplasmic reticulum stress
3472 O_BomoIG103125_3prime_partial:A_BomoIG_DN29800_c0_g1_i9
465bp
 very_long-chain-fatty-acid--CoA_ligase_bubblegum_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
3473 O_BomoIG103126_complete:A_BomoIG_DN29800_c0_g1_i9
109bp
3474 O_BomoIG103127_3prime_partial:A_BomoIG_DN29800_c0_g1_i10
527bp
 very_long-chain-fatty-acid--CoA_ligase_bubblegum_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
3475 O_BomoIG103128_complete:A_BomoIG_DN29800_c0_g1_i10
109bp
3476 O_BomoIG103129_complete:A_BomoIG_DN29837_c0_g1_i2
485bp
 potential_E3_ubiquitin-protein_ligase_ariadne-2_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
3477 O_BomoIG10312_5prime_partial:A_BomoIG_DN33790_c2_g3_i3
169bp
3478 O_BomoIG103130_5prime_partial:A_BomoIG_DN29837_c0_g1_i2
114bp
3479 O_BomoIG103131_complete:A_BomoIG_DN29837_c0_g1_i3
192bp
 potential_E3_ubiquitin-protein_ligase_ariadne-2_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
3480 O_BomoIG103132_complete:A_BomoIG_DN29837_c0_g1_i4
485bp
 potential_E3_ubiquitin-protein_ligase_ariadne-2_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
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