SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/104180
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3241 O_BomoIG102918_complete:A_BomoIG_DN29860_c0_g4_i1
123bp
3242 O_BomoIG102919_complete:A_BomoIG_DN29860_c0_g1_i3
285bp
 uncharacterized_protein_LOC101744639_isoform_X2_[Bombyx_mori]
3243 O_BomoIG10291_complete:A_BomoIG_DN33786_c1_g2_i8
249bp
 uncharacterized_protein_LOC101738733_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
3244 O_BomoIG102920_complete:A_BomoIG_DN29860_c0_g1_i3
141bp
3245 O_BomoIG102921_complete:A_BomoIG_DN29860_c0_g2_i6
333bp
 tumor_suppressor_candidate_3_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3246 O_BomoIG102922_complete:A_BomoIG_DN29860_c0_g2_i6
203bp
 small_GTP-binding_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
3247 O_BomoIG102923_complete:A_BomoIG_DN29860_c0_g1_i4
660bp
 uncharacterized_protein_LOC101744639_isoform_X2_[Bombyx_mori]
3248 O_BomoIG102924_complete:A_BomoIG_DN29860_c0_g1_i4
141bp
3249 O_BomoIG102925_5prime_partial:A_BomoIG_DN29860_c0_g4_i2
265bp
 prominin-like_protein_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0048812 P neuron projection morphogenesis
3250 O_BomoIG102926_5prime_partial:A_BomoIG_DN29860_c0_g4_i2
176bp
3251 O_BomoIG102927_complete:A_BomoIG_DN29860_c0_g4_i2
140bp
3252 O_BomoIG102928_complete:A_BomoIG_DN29860_c0_g4_i2
105bp
 hypothetical_protein_KGM_201134_[Danaus_plexippus_plexippus]
3253 O_BomoIG102929_5prime_partial:A_BomoIG_DN29860_c0_g4_i3
187bp
 prominin-like_protein_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0048812 P neuron projection morphogenesis
3254 O_BomoIG10292_complete:A_BomoIG_DN33786_c1_g2_i9
393bp
 uncharacterized_protein_LOC101738733_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
3255 O_BomoIG102930_5prime_partial:A_BomoIG_DN29860_c0_g4_i3
172bp
3256 O_BomoIG102931_complete:A_BomoIG_DN29860_c0_g1_i5
280bp
 uncharacterized_protein_LOC101744639_isoform_X3_[Bombyx_mori]
3257 O_BomoIG102932_complete:A_BomoIG_DN29860_c0_g1_i5
136bp
3258 O_BomoIG102933_complete:A_BomoIG_DN29860_c0_g2_i7
333bp
 tumor_suppressor_candidate_3_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3259 O_BomoIG102934_complete:A_BomoIG_DN29860_c0_g1_i6
283bp
 hypothetical_protein_RR48_04329_[Papilio_machaon]
3260 O_BomoIG102935_complete:A_BomoIG_DN29860_c0_g1_i7
446bp
 hypothetical_protein_RR46_03085_[Papilio_xuthus]
3261 O_BomoIG102936_5prime_partial:A_BomoIG_DN29860_c0_g4_i4
262bp
 prominin-like_protein_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0048812 P neuron projection morphogenesis
3262 O_BomoIG102937_5prime_partial:A_BomoIG_DN29860_c0_g4_i4
176bp
3263 O_BomoIG102938_complete:A_BomoIG_DN29860_c0_g4_i4
140bp
3264 O_BomoIG102939_5prime_partial:A_BomoIG_DN29860_c0_g4_i5
244bp
 prominin-like_protein_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0048812 P neuron projection morphogenesis
3265 O_BomoIG10293_complete:A_BomoIG_DN33786_c1_g2_i9
185bp
3266 O_BomoIG102940_complete:A_BomoIG_DN29860_c0_g4_i5
140bp
3267 O_BomoIG102941_complete:A_BomoIG_DN29860_c0_g2_i8
175bp
 tumor_suppressor_candidate_3_precursor_[Papilio_xuthus]
GO:0004579 F dolichyl-diphosphooligosaccharide-protein glycotransferase activity
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0008250 C oligosaccharyltransferase complex
GO:0015095 F magnesium ion transmembrane transporter activity
GO:0015693 P magnesium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0050890 P cognition
GO:1903830 P magnesium ion transmembrane transport
3268 O_BomoIG102942_complete:A_BomoIG_DN29860_c0_g2_i9
329bp
 tumor_suppressor_candidate_3_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3269 O_BomoIG102943_complete:A_BomoIG_DN29860_c0_g1_i8
681bp
 uncharacterized_protein_LOC101744639_isoform_X1_[Bombyx_mori]
3270 O_BomoIG102944_complete:A_BomoIG_DN29860_c0_g1_i8
162bp
previous next from show/104180

- SilkBase 1999-2023 -