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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2821 O_BomoIG10253_complete:A_BomoIG_DN33759_c2_g1_i7
387bp
 probable_malonyl-CoA-acyl_carrier_protein_transacylase,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004314 F [acyl-carrier-protein] S-malonyltransferase activity
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
2822 O_BomoIG102540_complete:A_BomoIG_DN2431_c0_g1_i1
233bp
 proteasome_beta_subunit_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0004175 F endopeptidase activity
GO:0004298 F threonine-type endopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005839 C proteasome core complex
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051603 P proteolysis involved in cellular protein catabolic process
2823 O_BomoIG102541_internal:A_BomoIG_DN2479_c0_g1_i1
102bp
 UDP-glycosyltransferase_UGT48C1_isoform_X1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0019439 P aromatic compound catabolic process
GO:0031090 C organelle membrane
GO:0042493 P response to xenobiotic stimulus
GO:0043231 C intracellular membrane-bounded organelle
2824 O_BomoIG102542_internal:A_BomoIG_DN2451_c0_g1_i1
107bp
 facilitated_trehalose_transporter_Tret1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
2825 O_BomoIG102543_5prime_partial:A_BomoIG_DN2451_c0_g1_i1
102bp
2826 O_BomoIG102544_5prime_partial:A_BomoIG_DN68389_c0_g1_i1
112bp
2827 O_BomoIG102545_internal:A_BomoIG_DN68315_c0_g1_i1
121bp
 15-hydroxyprostaglandin_dehydrogenase_[NAD(+)]_[Bombyx_mori]
GO:0004022 F alcohol dehydrogenase (NAD+) activity
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
2828 O_BomoIG102546_internal:A_BomoIG_DN68331_c0_g1_i1
177bp
 short-chain_dehydrogenase/reductase_family_16C_member_6_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
2829 O_BomoIG102547_internal:A_BomoIG_DN9558_c0_g1_i1
493bp
 glucose_dehydrogenase_[FAD,_quinone]_[Bombyx_mori]
GO:0004344 F glucose dehydrogenase activity
GO:0005576 C extracellular region
GO:0006006 P glucose metabolic process
GO:0008364 P pupal chitin-based cuticle development
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0019233 P sensory perception of pain
GO:0042335 P cuticle development
GO:0046693 P sperm storage
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
2830 O_BomoIG102548_complete:A_BomoIG_DN9558_c0_g1_i1
113bp
2831 O_BomoIG102549_internal:A_BomoIG_DN9547_c0_g1_i1
106bp
 PREDICTED:_uncharacterized_protein_LOC106138885,_partial_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000792 C heterochromatin
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007283 P spermatogenesis
GO:0007399 P nervous system development
GO:0008026 F helicase activity
GO:0008270 F zinc ion binding
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0016568 P chromatin organization
GO:0016581 C NuRD complex
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0021895 P cerebral cortex neuron differentiation
GO:0030154 P cell differentiation
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0042826 F histone deacetylase binding
GO:0043967 P histone H4 acetylation
GO:0045595 P regulation of cell differentiation
GO:0046872 F metal ion binding
GO:0060850 P obsolete regulation of transcription involved in cell fate commitment
GO:0061628 F H3K27me3 modified histone binding
GO:0098532 P histone H3-K27 trimethylation
GO:1901798 P positive regulation of signal transduction by p53 class mediator
2832 O_BomoIG10254_5prime_partial:A_BomoIG_DN33759_c2_g1_i8
284bp
 probable_malonyl-CoA-acyl_carrier_protein_transacylase,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004314 F [acyl-carrier-protein] S-malonyltransferase activity
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
2833 O_BomoIG102550_5prime_partial:A_BomoIG_DN29803_c7_g4_i1
190bp
 short_neuropeptide_F_precursor_[Bombyx_mori]
GO:0005184 F neuropeptide hormone activity
GO:0005576 C extracellular region
GO:0007218 P neuropeptide signaling pathway
GO:0032095 P regulation of response to food
GO:0040014 P regulation of multicellular organism growth
2834 O_BomoIG102551_complete:A_BomoIG_DN29803_c7_g4_i1
131bp
2835 O_BomoIG102552_3prime_partial:A_BomoIG_DN29803_c7_g4_i1
101bp
2836 O_BomoIG102553_5prime_partial:A_BomoIG_DN29803_c7_g1_i2
147bp
 lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_[Bombyx_mori]
GO:0001817 P regulation of cytokine production
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007568 P aging
GO:0016020 C membrane
GO:0032496 P response to lipopolysaccharide
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0050699 F WW domain binding
GO:0071222 P cellular response to lipopolysaccharide
2837 O_BomoIG102554_complete:A_BomoIG_DN29803_c7_g6_i1
228bp
 polymerase_delta-interacting_protein_2_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0042645 C mitochondrial nucleoid
GO:0070584 P mitochondrion morphogenesis
2838 O_BomoIG102555_complete:A_BomoIG_DN29803_c7_g6_i1
102bp
2839 O_BomoIG102556_5prime_partial:A_BomoIG_DN29803_c7_g4_i2
207bp
 short_neuropeptide_F_precursor_[Bombyx_mori]
GO:0005184 F neuropeptide hormone activity
GO:0005576 C extracellular region
GO:0007218 P neuropeptide signaling pathway
GO:0032095 P regulation of response to food
GO:0040014 P regulation of multicellular organism growth
2840 O_BomoIG102557_complete:A_BomoIG_DN29803_c7_g4_i2
131bp
2841 O_BomoIG102558_3prime_partial:A_BomoIG_DN29803_c7_g4_i2
101bp
2842 O_BomoIG102559_complete:A_BomoIG_DN29803_c7_g1_i5
130bp
 lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_isoform_X1_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
2843 O_BomoIG10255_complete:A_BomoIG_DN33759_c2_g1_i9
131bp
 probable_medium-chain_specific_acyl-CoA_dehydrogenase,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005777 C peroxisome
GO:0005811 C lipid droplet
GO:0005875 C microtubule associated complex
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
GO:0070991 F medium-chain-acyl-CoA dehydrogenase activity
2844 O_BomoIG102560_complete:A_BomoIG_DN29803_c7_g6_i2
358bp
 polymerase_delta-interacting_protein_2_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0016242 P negative regulation of macroautophagy
GO:0030674 F protein-macromolecule adaptor activity
GO:0042645 C mitochondrial nucleoid
GO:0045931 P positive regulation of mitotic cell cycle
GO:0070584 P mitochondrion morphogenesis
2845 O_BomoIG102561_complete:A_BomoIG_DN29803_c7_g6_i2
102bp
2846 O_BomoIG102562_complete:A_BomoIG_DN29803_c7_g6_i3
343bp
 polymerase_delta-interacting_protein_2_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0016242 P negative regulation of macroautophagy
GO:0030674 F protein-macromolecule adaptor activity
GO:0042645 C mitochondrial nucleoid
GO:0045931 P positive regulation of mitotic cell cycle
GO:0070584 P mitochondrion morphogenesis
2847 O_BomoIG102563_complete:A_BomoIG_DN29803_c7_g6_i3
102bp
2848 O_BomoIG102564_internal:A_BomoIG_DN29803_c7_g1_i7
107bp
 lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_[Bombyx_mori]
2849 O_BomoIG102565_5prime_partial:A_BomoIG_DN29803_c7_g1_i8
160bp
 lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_[Bombyx_mori]
GO:0001817 P regulation of cytokine production
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007568 P aging
GO:0016020 C membrane
GO:0032496 P response to lipopolysaccharide
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0050699 F WW domain binding
GO:0071222 P cellular response to lipopolysaccharide
2850 O_BomoIG102566_5prime_partial:A_BomoIG_DN29803_c7_g1_i9
147bp
 lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_[Bombyx_mori]
GO:0001817 P regulation of cytokine production
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007568 P aging
GO:0016020 C membrane
GO:0032496 P response to lipopolysaccharide
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0050699 F WW domain binding
GO:0071222 P cellular response to lipopolysaccharide
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