Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
2551	O_BomoIG102297_complete:A_BomoIG_DN30799_c6_g2_i3 125bp	Bomo_Chr23
2552	O_BomoIG102298_5prime_partial:A_BomoIG_DN30799_c6_g2_i4 476bp	Bomo_Chr23	apaf-1_protein_isoform_X1_[Bombyx_mori]	GO:0003674 F molecular_function GO:0004842 F ubiquitin-protein transferase activity GO:0005575 C cellular_component GO:0008150 P biological_process GO:0016567 P protein ubiquitination
2553	O_BomoIG102299_complete:A_BomoIG_DN30799_c6_g2_i4 125bp	Bomo_Chr23
2554	O_BomoIG10229_internal:A_BomoIG_DN33753_c2_g1_i1 752bp	Bomo_Chr1	paramyosin_[Bombyx_mandarina]	GO:0003774 F cytoskeletal motor activity GO:0005737 C cytoplasm GO:0005863 C striated muscle myosin thick filament GO:0007498 P mesoderm development GO:0008152 P metabolic process GO:0008307 F structural constituent of muscle GO:0016459 C myosin complex GO:0030016 C myofibril GO:0030239 P myofibril assembly GO:0032982 C myosin filament
2555	O_BomoIG1022_complete:A_BomoIG_DN30229_c1_g2_i10 155bp	Bomo_Chr18
2556	O_BomoIG102300_complete:A_BomoIG_DN30799_c6_g2_i6 103bp	Bomo_Chr23
2557	O_BomoIG102301_complete:A_BomoIG_DN30799_c6_g1_i3 154bp	Bomo_Chr12	repressor_splicing_factor_1_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000381 P regulation of alternative mRNA splicing, via spliceosome GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0003729 F mRNA binding GO:0005634 C nucleus GO:0010468 P regulation of gene expression GO:0031440 P regulation of mRNA 3'-end processing GO:0048025 P negative regulation of mRNA splicing, via spliceosome
2558	O_BomoIG102302_complete:A_BomoIG_DN30799_c6_g1_i4 154bp	Bomo_Chr12	repressor_splicing_factor_1_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000381 P regulation of alternative mRNA splicing, via spliceosome GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0003729 F mRNA binding GO:0005634 C nucleus GO:0010468 P regulation of gene expression GO:0031440 P regulation of mRNA 3'-end processing GO:0048025 P negative regulation of mRNA splicing, via spliceosome
2559	O_BomoIG102303_complete:A_BomoIG_DN30799_c6_g1_i5 154bp	Bomo_Chr12	repressor_splicing_factor_1_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000381 P regulation of alternative mRNA splicing, via spliceosome GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0003729 F mRNA binding GO:0005634 C nucleus GO:0010468 P regulation of gene expression GO:0031440 P regulation of mRNA 3'-end processing GO:0048025 P negative regulation of mRNA splicing, via spliceosome
2560	O_BomoIG102304_complete:A_BomoIG_DN30712_c4_g1_i1 572bp	Bomo_Chr18	connectin_[Bombyx_mori]	GO:0005886 C plasma membrane GO:0007155 P cell adhesion GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules GO:0007275 P multicellular organism development GO:0007413 P axonal fasciculation GO:0009986 C cell surface GO:0016020 C membrane GO:0016200 P synaptic target attraction GO:0031225 C anchored component of membrane GO:0031594 C neuromuscular junction GO:0044295 C axonal growth cone
2561	O_BomoIG102305_complete:A_BomoIG_DN30712_c4_g2_i1 151bp	Bomo_Chr15	tctex1_domain-containing_protein_2_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
2562	O_BomoIG102306_3prime_partial:A_BomoIG_DN30712_c4_g3_i1 434bp	Bomo_Chr18	uncharacterized_protein_LOC101735968_isoform_X2_[Bombyx_mori]
2563	O_BomoIG102307_5prime_partial:A_BomoIG_DN30712_c4_g3_i1 173bp	Bomo_Chr18
2564	O_BomoIG102308_3prime_partial:A_BomoIG_DN30712_c4_g3_i2 189bp	Bomo_Chr18	uncharacterized_protein_LOC101735968_isoform_X1_[Bombyx_mori]
2565	O_BomoIG102309_5prime_partial:A_BomoIG_DN30712_c4_g5_i1 180bp	Bomo_Chr4	ribosomal_protein_S18_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0003735 F structural constituent of ribosome GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0005840 C ribosome GO:0006412 P translation GO:0019843 F rRNA binding GO:0030529 C ribonucleoprotein complex
2566	O_BomoIG10230_5prime_partial:A_BomoIG_DN33753_c2_g1_i1 199bp	Bomo_Chr1	hypothetical_protein_ALC62_01585,_partial_[Cyphomyrmex_costatus]
2567	O_BomoIG102310_5prime_partial:A_BomoIG_DN30712_c4_g5_i2 154bp	Bomo_Chr4	ribosomal_protein_S18_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0003735 F structural constituent of ribosome GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0005840 C ribosome GO:0006412 P translation GO:0019843 F rRNA binding GO:0030529 C ribonucleoprotein complex
2568	O_BomoIG102311_complete:A_BomoIG_DN30712_c4_g3_i3 1213bp	Bomo_Chr18	uncharacterized_protein_LOC101735968_isoform_X1_[Bombyx_mori]	GO:0000416 P positive regulation of histone H3-K36 methylation GO:0001570 P vasculogenesis GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006281 P DNA repair GO:0006303 P double-strand break repair via nonhomologous end joining GO:0006310 P DNA recombination GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006974 P cellular response to DNA damage stimulus GO:0010212 P response to ionizing radiation GO:0016363 C nuclear matrix GO:0030330 P DNA damage response, signal transduction by p53 class mediator GO:0031398 P positive regulation of protein ubiquitination GO:0035066 P positive regulation of histone acetylation GO:0035097 C histone methyltransferase complex GO:0043542 P endothelial cell migration GO:0044666 C MLL3/4 complex GO:0045830 P positive regulation of isotype switching GO:0051568 P histone H3-K4 methylation GO:0051571 P positive regulation of histone H3-K4 methylation GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter GO:0060612 P adipose tissue development GO:0060717 P chorion development
2569	O_BomoIG102312_5prime_partial:A_BomoIG_DN30712_c4_g3_i3 227bp	Bomo_Chr18
2570	O_BomoIG102313_complete:A_BomoIG_DN30712_c4_g3_i3 190bp	Bomo_Chr18
2571	O_BomoIG102314_complete:A_BomoIG_DN30712_c4_g3_i4 1020bp	Bomo_Chr18	uncharacterized_protein_LOC101735968_isoform_X3_[Bombyx_mori]	GO:0005634 C nucleus GO:0005694 C chromosome GO:0006281 P DNA repair GO:0006974 P cellular response to DNA damage stimulus GO:0007049 P cell cycle
2572	O_BomoIG102315_5prime_partial:A_BomoIG_DN30712_c4_g3_i4 227bp	Bomo_Chr18
2573	O_BomoIG102316_complete:A_BomoIG_DN30712_c4_g3_i4 190bp	Bomo_Chr18
2574	O_BomoIG102317_5prime_partial:A_BomoIG_DN30712_c4_g5_i3 180bp	Bomo_Chr4	ribosomal_protein_S18_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0003735 F structural constituent of ribosome GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0005840 C ribosome GO:0006412 P translation GO:0019843 F rRNA binding GO:0030529 C ribonucleoprotein complex
2575	O_BomoIG102318_3prime_partial:A_BomoIG_DN30712_c4_g3_i5 391bp	Bomo_Chr18	uncharacterized_protein_LOC101735968_isoform_X2_[Bombyx_mori]
2576	O_BomoIG102319_5prime_partial:A_BomoIG_DN30712_c4_g3_i5 173bp	Bomo_Chr18
2577	O_BomoIG10231_complete:A_BomoIG_DN33753_c2_g1_i1 199bp	Bomo_Chr1
2578	O_BomoIG102320_3prime_partial:A_BomoIG_DN30712_c4_g3_i6 149bp	Bomo_Chr18	uncharacterized_protein_LOC101735968_isoform_X2_[Bombyx_mori]
2579	O_BomoIG102321_complete:A_BomoIG_DN30712_c4_g12_i1 564bp	Bomo_Chr20	transcription_factor_Sox-17-alpha-A_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0003677 F DNA binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0008285 P negative regulation of cell population proliferation GO:0022416 P chaeta development GO:0035220 P wing disc development GO:0043066 P negative regulation of apoptotic process GO:0045892 P negative regulation of transcription, DNA-templated
2580	O_BomoIG102322_5prime_partial:A_BomoIG_DN30712_c4_g14_i1 714bp	Bomo_Chr15	LOW_QUALITY_PROTEIN:_SET_and_MYND_domain-containing_protein_4_[Bombyx_mori]	GO:0008168 F methyltransferase activity GO:0016740 F transferase activity GO:0032259 P methylation GO:0046872 F metal ion binding