SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/104180
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2311 O_BomoIG102080_complete:A_BomoIG_DN30785_c1_g1_i6
517bp
 uncharacterized_protein_LOC101745924_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2312 O_BomoIG102081_complete:A_BomoIG_DN30785_c1_g1_i6
259bp
 putative_methyltransferase_NSUN6_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
2313 O_BomoIG102082_complete:A_BomoIG_DN30785_c1_g1_i6
168bp
 putative_methyltransferase_NSUN6_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
2314 O_BomoIG102083_complete:A_BomoIG_DN30785_c1_g1_i7
517bp
 uncharacterized_protein_LOC101745924_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2315 O_BomoIG102084_complete:A_BomoIG_DN30785_c1_g1_i7
259bp
 putative_methyltransferase_NSUN6_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
2316 O_BomoIG102085_complete:A_BomoIG_DN30785_c1_g1_i8
517bp
 uncharacterized_protein_LOC101745924_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2317 O_BomoIG102086_complete:A_BomoIG_DN30785_c1_g1_i8
241bp
 putative_methyltransferase_NSUN6_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
2318 O_BomoIG102087_complete:A_BomoIG_DN30785_c1_g1_i8
120bp
 putative_methyltransferase_NSUN6_isoform_X2_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
2319 O_BomoIG102088_complete:A_BomoIG_DN30785_c1_g1_i9
286bp
 putative_methyltransferase_NSUN6_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
2320 O_BomoIG102089_complete:A_BomoIG_DN30785_c1_g1_i10
517bp
 uncharacterized_protein_LOC101745924_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2321 O_BomoIG10208_3prime_partial:A_BomoIG_DN33752_c0_g1_i1
192bp
 uncharacterized_protein_LOC101743642_isoform_X1_[Bombyx_mori]
2322 O_BomoIG102090_complete:A_BomoIG_DN30785_c1_g1_i10
324bp
 putative_methyltransferase_NSUN6_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
2323 O_BomoIG102091_complete:A_BomoIG_DN30785_c1_g1_i11
517bp
 uncharacterized_protein_LOC101745924_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2324 O_BomoIG102092_complete:A_BomoIG_DN30785_c1_g1_i11
168bp
 putative_methyltransferase_NSUN6_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
2325 O_BomoIG102093_complete:A_BomoIG_DN30785_c1_g1_i11
120bp
 putative_methyltransferase_NSUN6_isoform_X2_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
2326 O_BomoIG102094_complete:A_BomoIG_DN30785_c1_g1_i12
517bp
 uncharacterized_protein_LOC101745924_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2327 O_BomoIG102095_complete:A_BomoIG_DN30785_c1_g1_i12
280bp
 putative_methyltransferase_NSUN6_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
2328 O_BomoIG102096_5prime_partial:A_BomoIG_DN30738_c2_g1_i2
108bp
2329 O_BomoIG102097_complete:A_BomoIG_DN30738_c4_g1_i1
284bp
 ankyrin_repeat,_SAM_and_basic_leucine_zipper_domain-containing_protein_1_[Bombyx_mori]
2330 O_BomoIG102098_complete:A_BomoIG_DN30738_c4_g2_i1
274bp
 ribosomal_protein_L6_isoform_X1_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
2331 O_BomoIG102099_internal:A_BomoIG_DN30738_c4_g3_i2
463bp
 ATP-binding_cassette_sub-family_A_member_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0031288 P sorocarp morphogenesis
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0044351 P macropinocytosis
GO:0055085 P transmembrane transport
2332 O_BomoIG10209_5prime_partial:A_BomoIG_DN33752_c0_g1_i1
107bp
2333 O_BomoIG1020_complete:A_BomoIG_DN30229_c1_g2_i9
155bp
2334 O_BomoIG102100_5prime_partial:A_BomoIG_DN30738_c4_g3_i2
115bp
2335 O_BomoIG102101_complete:A_BomoIG_DN30738_c4_g1_i2
133bp
 ankyrin_repeat,_SAM_and_basic_leucine_zipper_domain-containing_protein_1_[Bombyx_mori]
2336 O_BomoIG102102_internal:A_BomoIG_DN30738_c4_g3_i3
498bp
 ATP-binding_cassette_sub-family_A_member_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005815 C microtubule organizing center
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016887 F ATP hydrolysis activity
GO:0032383 P regulation of intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0048545 P response to steroid hormone
GO:0055085 P transmembrane transport
2337 O_BomoIG102103_complete:A_BomoIG_DN30738_c4_g2_i4
274bp
 ribosomal_protein_L6_isoform_X1_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
2338 O_BomoIG102104_3prime_partial:A_BomoIG_DN30738_c4_g3_i4
379bp
 ATP-binding_cassette_sub-family_A_member_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005815 C microtubule organizing center
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016887 F ATP hydrolysis activity
GO:0032383 P regulation of intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0048545 P response to steroid hormone
GO:0055085 P transmembrane transport
2339 O_BomoIG102105_complete:A_BomoIG_DN30738_c4_g1_i3
481bp
 ankyrin_repeat,_SAM_and_basic_leucine_zipper_domain-containing_protein_1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007140 P male meiotic nuclear division
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0031047 P gene silencing by RNA
GO:0034587 P piRNA metabolic process
GO:0043046 P DNA methylation involved in gamete generation
GO:0051321 P meiotic cell cycle
GO:0071546 C pi-body
2340 O_BomoIG102106_complete:A_BomoIG_DN30738_c4_g1_i4
324bp
 ankyrin_repeat,_SAM_and_basic_leucine_zipper_domain-containing_protein_1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007140 P male meiotic nuclear division
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0031047 P gene silencing by RNA
GO:0034587 P piRNA metabolic process
GO:0043046 P DNA methylation involved in gamete generation
GO:0051321 P meiotic cell cycle
GO:0071546 C pi-body
previous next from show/104180

- SilkBase 1999-2023 -