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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2071 O_BomoIG101865_complete:A_BomoIG_DN30797_c3_g4_i12
189bp
 E3_ubiquitin-protein_ligase_TRAIP-like_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016605 C PML body
GO:0016874 F ligase activity
GO:0030521 P androgen receptor signaling pathway
GO:0031491 F nucleosome binding
GO:0032184 F SUMO polymer binding
GO:0033234 P negative regulation of protein sumoylation
GO:0033768 C SUMO-targeted ubiquitin ligase complex
GO:0042802 F identical protein binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046685 P response to arsenic-containing substance
GO:0046872 F metal ion binding
GO:0050681 F androgen receptor binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
GO:0070979 P protein K11-linked ubiquitination
GO:0085020 P protein K6-linked ubiquitination
GO:0090169 P regulation of spindle assembly
GO:0090234 P regulation of kinetochore assembly
2072 O_BomoIG101866_complete:A_BomoIG_DN30797_c3_g4_i12
124bp
 cytochrome_P450,_partial_[Bombyx_mori]
2073 O_BomoIG101867_complete:A_BomoIG_DN30797_c3_g5_i3
153bp
 calcium-binding_protein_E63-1_isoform_X2_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0035071 P salivary gland cell autophagic cell death
GO:0046872 F metal ion binding
GO:0048102 P autophagic cell death
2074 O_BomoIG101868_complete:A_BomoIG_DN30797_c3_g5_i3
137bp
 calcium-binding_protein_E63-1_isoform_X1_[Bombyx_mori]
2075 O_BomoIG101869_complete:A_BomoIG_DN30797_c3_g1_i7
108bp
 uncharacterized_protein_LOC101744612_[Bombyx_mori]
2076 O_BomoIG10186_5prime_partial:A_BomoIG_DN33723_c0_g1_i5
164bp
 PREDICTED:_uncharacterized_protein_LOC108252780_[Diaphorina_citri]
2077 O_BomoIG101870_complete:A_BomoIG_DN30797_c3_g5_i4
126bp
 calcium-binding_protein_E63-1_isoform_X2_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0035071 P salivary gland cell autophagic cell death
GO:0046872 F metal ion binding
GO:0048102 P autophagic cell death
2078 O_BomoIG101871_complete:A_BomoIG_DN30797_c3_g7_i2
118bp
 cytochrome_P450_18a1_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006694 P steroid biosynthetic process
GO:0007275 P multicellular organism development
GO:0007304 P chorion-containing eggshell formation
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007552 P metamorphosis
GO:0008395 F steroid hydroxylase activity
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0035074 P pupation
GO:0035210 P prepupal development
GO:0043231 C intracellular membrane-bounded organelle
GO:0046344 P ecdysteroid catabolic process
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2079 O_BomoIG101872_complete:A_BomoIG_DN30797_c3_g4_i13
244bp
 E3_ubiquitin-protein_ligase_TRAIP-like_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016605 C PML body
GO:0016874 F ligase activity
GO:0030521 P androgen receptor signaling pathway
GO:0031491 F nucleosome binding
GO:0032184 F SUMO polymer binding
GO:0033234 P negative regulation of protein sumoylation
GO:0033768 C SUMO-targeted ubiquitin ligase complex
GO:0042802 F identical protein binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046685 P response to arsenic-containing substance
GO:0046872 F metal ion binding
GO:0050681 F androgen receptor binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
GO:0070979 P protein K11-linked ubiquitination
GO:0085020 P protein K6-linked ubiquitination
GO:0090169 P regulation of spindle assembly
GO:0090234 P regulation of kinetochore assembly
2080 O_BomoIG101873_complete:A_BomoIG_DN30797_c3_g4_i13
124bp
 cytochrome_P450,_partial_[Bombyx_mori]
2081 O_BomoIG101874_complete:A_BomoIG_DN30797_c3_g1_i9
160bp
 uncharacterized_protein_LOC101744612_[Bombyx_mori]
2082 O_BomoIG101875_complete:A_BomoIG_DN30797_c3_g5_i5
144bp
 calcium-binding_protein_E63-1_isoform_X1_[Bombyx_mori]
2083 O_BomoIG101876_complete:A_BomoIG_DN30797_c3_g4_i14
231bp
 E3_ubiquitin-protein_ligase_TRAIP-like_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016605 C PML body
GO:0016874 F ligase activity
GO:0030521 P androgen receptor signaling pathway
GO:0031491 F nucleosome binding
GO:0032184 F SUMO polymer binding
GO:0033234 P negative regulation of protein sumoylation
GO:0033768 C SUMO-targeted ubiquitin ligase complex
GO:0042802 F identical protein binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046685 P response to arsenic-containing substance
GO:0046872 F metal ion binding
GO:0050681 F androgen receptor binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
GO:0070979 P protein K11-linked ubiquitination
GO:0085020 P protein K6-linked ubiquitination
GO:0090169 P regulation of spindle assembly
GO:0090234 P regulation of kinetochore assembly
2084 O_BomoIG101877_complete:A_BomoIG_DN30797_c3_g5_i6
270bp
 calcium-binding_protein_E63-1_isoform_X1_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0035071 P salivary gland cell autophagic cell death
GO:0046872 F metal ion binding
GO:0048102 P autophagic cell death
2085 O_BomoIG101878_3prime_partial:A_BomoIG_DN30704_c0_g3_i1
411bp
 DNA_excision_repair_protein_haywire_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:1903506 P regulation of nucleic acid-templated transcription
2086 O_BomoIG101879_5prime_partial:A_BomoIG_DN30704_c0_g2_i2
150bp
 LOW_QUALITY_PROTEIN:_DNA_excision_repair_protein_haywire_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0007049 P cell cycle
GO:0031390 C Ctf18 RFC-like complex
GO:0043142 F single-stranded DNA helicase activity
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
2087 O_BomoIG10187_complete:A_BomoIG_DN33723_c0_g1_i5
105bp
 PREDICTED:_uncharacterized_protein_LOC109038289_[Bemisia_tabaci]
2088 O_BomoIG101880_3prime_partial:A_BomoIG_DN30704_c0_g3_i3
740bp
 PREDICTED:_DNA_excision_repair_protein_haywire_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:1903506 P regulation of nucleic acid-templated transcription
2089 O_BomoIG101881_complete:A_BomoIG_DN30704_c0_g2_i3
114bp
 LOW_QUALITY_PROTEIN:_DNA_excision_repair_protein_haywire_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0007049 P cell cycle
GO:0031390 C Ctf18 RFC-like complex
GO:0043142 F single-stranded DNA helicase activity
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
2090 O_BomoIG101882_complete:A_BomoIG_DN30704_c0_g3_i4
721bp
 PREDICTED:_DNA_excision_repair_protein_haywire_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:1903506 P regulation of nucleic acid-templated transcription
2091 O_BomoIG101883_3prime_partial:A_BomoIG_DN30704_c0_g3_i5
360bp
 DNA_excision_repair_protein_haywire_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:1903506 P regulation of nucleic acid-templated transcription
2092 O_BomoIG101884_internal:A_BomoIG_DN30704_c0_g3_i6
233bp
 PREDICTED:_DNA_excision_repair_protein_haywire_isoform_X1_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:1903506 P regulation of nucleic acid-templated transcription
2093 O_BomoIG101885_3prime_partial:A_BomoIG_DN30704_c0_g3_i7
194bp
 LOW_QUALITY_PROTEIN:_DNA_excision_repair_protein_haywire_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:1903506 P regulation of nucleic acid-templated transcription
2094 O_BomoIG101886_complete:A_BomoIG_DN30704_c0_g3_i8
530bp
 LOW_QUALITY_PROTEIN:_DNA_excision_repair_protein_haywire_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:1903506 P regulation of nucleic acid-templated transcription
2095 O_BomoIG101887_complete:A_BomoIG_DN30704_c0_g3_i9
201bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_DNA_excision_repair_protein_haywire_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:1903506 P regulation of nucleic acid-templated transcription
2096 O_BomoIG101888_complete:A_BomoIG_DN30704_c0_g3_i11
612bp
 PREDICTED:_DNA_excision_repair_protein_haywire_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:1903506 P regulation of nucleic acid-templated transcription
2097 O_BomoIG101889_complete:A_BomoIG_DN30704_c1_g5_i1
546bp
 LOW_QUALITY_PROTEIN:_facilitated_trehalose_transporter_Tret1-2_homolog_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005351 F carbohydrate:proton symporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0035428 P hexose transmembrane transport
GO:0046323 P glucose import
GO:0055085 P transmembrane transport
GO:1904659 P glucose transmembrane transport
2098 O_BomoIG10188_internal:A_BomoIG_DN33723_c0_g2_i2
591bp
 putative_integrase_core_domain_protein,_partial_[Operophtera_brumata]
2099 O_BomoIG101890_complete:A_BomoIG_DN30704_c1_g5_i1
142bp
 uncharacterized_protein_LOC101742676_isoform_X1_[Bombyx_mori]
2100 O_BomoIG101891_complete:A_BomoIG_DN30704_c1_g5_i3
546bp
 LOW_QUALITY_PROTEIN:_facilitated_trehalose_transporter_Tret1-2_homolog_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005351 F carbohydrate:proton symporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0035428 P hexose transmembrane transport
GO:0046323 P glucose import
GO:0055085 P transmembrane transport
GO:1904659 P glucose transmembrane transport
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