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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1741 O_BomoIG101568_5prime_partial:A_BomoIG_DN30789_c1_g7_i2
201bp
1742 O_BomoIG101569_5prime_partial:A_BomoIG_DN30789_c1_g7_i2
188bp
 epidermal_growth_factor_receptor_substrate_15-like_1_[Bombyx_mori]
1743 O_BomoIG10156_complete:A_BomoIG_DN33770_c2_g6_i1
328bp
 protein_RTF2_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
1744 O_BomoIG101570_3prime_partial:A_BomoIG_DN30789_c1_g7_i2
127bp
1745 O_BomoIG101571_complete:A_BomoIG_DN30789_c1_g8_i2
468bp
 probable_G-protein_coupled_receptor_Mth-like_1_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007369 P gastrulation
GO:0007472 P wing disc morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007509 P mesoderm migration involved in gastrulation
GO:0008340 P determination of adult lifespan
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042594 P response to starvation
GO:0070252 P actin-mediated cell contraction
1746 O_BomoIG101572_complete:A_BomoIG_DN30789_c1_g8_i2
110bp
 probable_G-protein_coupled_receptor_Mth-like_1_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007369 P gastrulation
GO:0007472 P wing disc morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007509 P mesoderm migration involved in gastrulation
GO:0008340 P determination of adult lifespan
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042594 P response to starvation
GO:0070252 P actin-mediated cell contraction
1747 O_BomoIG101573_complete:A_BomoIG_DN30789_c1_g8_i2
105bp
1748 O_BomoIG101574_complete:A_BomoIG_DN30705_c6_g9_i1
344bp
 uncharacterized_protein_LOC105841361_[Bombyx_mori]
1749 O_BomoIG101575_complete:A_BomoIG_DN30705_c6_g9_i1
131bp
1750 O_BomoIG101576_complete:A_BomoIG_DN30705_c6_g9_i2
344bp
 uncharacterized_protein_LOC105841361_[Bombyx_mori]
1751 O_BomoIG101577_complete:A_BomoIG_DN30705_c6_g9_i2
131bp
1752 O_BomoIG101578_complete:A_BomoIG_DN30718_c1_g1_i1
958bp
 LOW_QUALITY_PROTEIN:_regulator_of_nonsense_transcripts_2_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0001889 P liver development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031100 P animal organ regeneration
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0048471 C perinuclear region of cytoplasm
1753 O_BomoIG101579_complete:A_BomoIG_DN30718_c1_g1_i1
145bp
 LOW_QUALITY_PROTEIN:_regulator_of_nonsense_transcripts_2_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0001889 P liver development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031100 P animal organ regeneration
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0048471 C perinuclear region of cytoplasm
1754 O_BomoIG10157_complete:A_BomoIG_DN33770_c2_g5_i3
128bp
 uncharacterized_protein_C20orf24_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0008150 P biological_process
1755 O_BomoIG101580_complete:A_BomoIG_DN30718_c1_g1_i2
958bp
 LOW_QUALITY_PROTEIN:_regulator_of_nonsense_transcripts_2_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0001889 P liver development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031100 P animal organ regeneration
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0048471 C perinuclear region of cytoplasm
1756 O_BomoIG101581_complete:A_BomoIG_DN30718_c1_g1_i2
145bp
 LOW_QUALITY_PROTEIN:_regulator_of_nonsense_transcripts_2_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0001889 P liver development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031100 P animal organ regeneration
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0048471 C perinuclear region of cytoplasm
1757 O_BomoIG101582_complete:A_BomoIG_DN30718_c1_g1_i4
158bp
 LOW_QUALITY_PROTEIN:_regulator_of_nonsense_transcripts_2_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0001889 P liver development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031100 P animal organ regeneration
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0048471 C perinuclear region of cytoplasm
1758 O_BomoIG101583_complete:A_BomoIG_DN30718_c1_g1_i5
1109bp
 LOW_QUALITY_PROTEIN:_regulator_of_nonsense_transcripts_2_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0001889 P liver development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031100 P animal organ regeneration
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0048471 C perinuclear region of cytoplasm
1759 O_BomoIG101584_5prime_partial:A_BomoIG_DN30718_c1_g1_i6
150bp
 LOW_QUALITY_PROTEIN:_regulator_of_nonsense_transcripts_2_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0001889 P liver development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031100 P animal organ regeneration
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0048471 C perinuclear region of cytoplasm
1760 O_BomoIG101585_complete:A_BomoIG_DN30718_c1_g1_i7
1109bp
 LOW_QUALITY_PROTEIN:_regulator_of_nonsense_transcripts_2_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0001889 P liver development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031100 P animal organ regeneration
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0048471 C perinuclear region of cytoplasm
1761 O_BomoIG101586_complete:A_BomoIG_DN30718_c1_g1_i8
205bp
 LOW_QUALITY_PROTEIN:_regulator_of_nonsense_transcripts_2_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0001889 P liver development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031100 P animal organ regeneration
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0048471 C perinuclear region of cytoplasm
1762 O_BomoIG101587_complete:A_BomoIG_DN30761_c7_g1_i1
817bp
 uncharacterized_protein_LOC101744460_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
1763 O_BomoIG101588_complete:A_BomoIG_DN30761_c7_g1_i1
130bp
1764 O_BomoIG101589_complete:A_BomoIG_DN30761_c7_g1_i1
125bp
1765 O_BomoIG10158_complete:A_BomoIG_DN33770_c2_g5_i3
115bp
1766 O_BomoIG101590_complete:A_BomoIG_DN30761_c7_g1_i1
123bp
1767 O_BomoIG101591_complete:A_BomoIG_DN30761_c7_g1_i2
101bp
1768 O_BomoIG101592_complete:A_BomoIG_DN30761_c7_g1_i3
214bp
 uncharacterized_protein_LOC101744460_isoform_X2_[Bombyx_mori]
1769 O_BomoIG101593_complete:A_BomoIG_DN30761_c7_g1_i3
125bp
1770 O_BomoIG101594_complete:A_BomoIG_DN30761_c7_g1_i4
599bp
 uncharacterized_protein_LOC101744460_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
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