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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
121 O_BomoIG100109_complete:A_BomoIG_DN31570_c5_g3_i13
126bp
122 O_BomoIG10010_complete:A_BomoIG_DN33712_c4_g3_i14
184bp
 PREDICTED:_uncharacterized_protein_LOC106713145_[Papilio_machaon]
123 O_BomoIG100110_complete:A_BomoIG_DN31570_c5_g3_i14
159bp
 BTB/POZ_domain-containing_protein_9_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007399 P nervous system development
GO:0021987 P cerebral cortex development
GO:0048813 P dendrite morphogenesis
124 O_BomoIG100111_complete:A_BomoIG_DN31570_c5_g3_i16
188bp
 BTB/POZ_domain-containing_protein_9_isoform_X2_[Bombyx_mori]
125 O_BomoIG100112_5prime_partial:A_BomoIG_DN31570_c5_g2_i4
126bp
 3-ketoacyl-CoA_thiolase,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003988 F acetyl-CoA C-acyltransferase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
GO:0071456 P cellular response to hypoxia
GO:1901029 P negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway
GO:1902109 P negative regulation of mitochondrial membrane permeability involved in apoptotic process
126 O_BomoIG100113_complete:A_BomoIG_DN31570_c5_g3_i18
393bp
 BTB/POZ_domain-containing_protein_9_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007399 P nervous system development
GO:0021987 P cerebral cortex development
GO:0048813 P dendrite morphogenesis
127 O_BomoIG100114_internal:A_BomoIG_DN31575_c3_g1_i1
125bp
 regulation_of_nuclear_pre-mRNA_domain-containing_protein_1B_isoform_X2_[Bombyx_mori]
GO:0016591 C RNA polymerase II, holoenzyme
GO:0070940 P dephosphorylation of RNA polymerase II C-terminal domain
128 O_BomoIG100115_complete:A_BomoIG_DN31575_c3_g1_i2
303bp
 regulation_of_nuclear_pre-mRNA_domain-containing_protein_1B_isoform_X1_[Bombyx_mori]
GO:0016591 C RNA polymerase II, holoenzyme
GO:0070940 P dephosphorylation of RNA polymerase II C-terminal domain
129 O_BomoIG100116_complete:A_BomoIG_DN31575_c3_g2_i2
290bp
 uncharacterized_protein_LOC101742472_[Bombyx_mori]
130 O_BomoIG100117_complete:A_BomoIG_DN31575_c3_g1_i3
349bp
 regulation_of_nuclear_pre-mRNA_domain-containing_protein_1B_isoform_X1_[Bombyx_mori]
GO:0000993 F RNA polymerase II complex binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008284 P positive regulation of cell population proliferation
GO:0010564 P regulation of cell cycle process
GO:0016591 C RNA polymerase II, holoenzyme
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070940 P dephosphorylation of RNA polymerase II C-terminal domain
131 O_BomoIG100118_5prime_partial:A_BomoIG_DN31575_c3_g3_i4
118bp
 uncharacterized_protein_LOC105841936_[Bombyx_mori]
132 O_BomoIG100119_internal:A_BomoIG_DN31575_c3_g3_i6
110bp
 uncharacterized_protein_LOC101738426_[Bombyx_mori]
133 O_BomoIG10011_complete:A_BomoIG_DN33712_c4_g3_i15
184bp
 PREDICTED:_uncharacterized_protein_LOC106713145_[Papilio_machaon]
134 O_BomoIG100120_internal:A_BomoIG_DN31575_c3_g3_i6
110bp
135 O_BomoIG100121_complete:A_BomoIG_DN31575_c3_g1_i4
349bp
 regulation_of_nuclear_pre-mRNA_domain-containing_protein_1B_isoform_X1_[Bombyx_mori]
GO:0000993 F RNA polymerase II complex binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008284 P positive regulation of cell population proliferation
GO:0010564 P regulation of cell cycle process
GO:0016591 C RNA polymerase II, holoenzyme
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070940 P dephosphorylation of RNA polymerase II C-terminal domain
136 O_BomoIG100122_complete:A_BomoIG_DN31575_c3_g2_i3
290bp
 uncharacterized_protein_LOC101742472_[Bombyx_mori]
137 O_BomoIG100123_complete:A_BomoIG_DN31575_c3_g1_i5
349bp
 regulation_of_nuclear_pre-mRNA_domain-containing_protein_1B_isoform_X1_[Bombyx_mori]
GO:0000993 F RNA polymerase II complex binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008284 P positive regulation of cell population proliferation
GO:0010564 P regulation of cell cycle process
GO:0016591 C RNA polymerase II, holoenzyme
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070940 P dephosphorylation of RNA polymerase II C-terminal domain
138 O_BomoIG100124_complete:A_BomoIG_DN31575_c3_g1_i6
349bp
 regulation_of_nuclear_pre-mRNA_domain-containing_protein_1B_isoform_X1_[Bombyx_mori]
GO:0000993 F RNA polymerase II complex binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008284 P positive regulation of cell population proliferation
GO:0010564 P regulation of cell cycle process
GO:0016591 C RNA polymerase II, holoenzyme
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070940 P dephosphorylation of RNA polymerase II C-terminal domain
139 O_BomoIG100125_5prime_partial:A_BomoIG_DN31575_c3_g11_i1
106bp
140 O_BomoIG100126_5prime_partial:A_BomoIG_DN31575_c3_g3_i15
111bp
 uncharacterized_protein_LOC101738426_[Bombyx_mori]
141 O_BomoIG100127_5prime_partial:A_BomoIG_DN31575_c3_g3_i15
101bp
142 O_BomoIG100128_complete:A_BomoIG_DN31567_c2_g1_i1
311bp
 LOW_QUALITY_PROTEIN:_proclotting_enzyme_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0042381 P hemolymph coagulation
143 O_BomoIG100129_complete:A_BomoIG_DN31567_c2_g2_i2
204bp
 Bmsqd-2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0000785 C chromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0007293 P germarium-derived egg chamber formation
GO:0007297 P ovarian follicle cell migration
GO:0007314 P oocyte anterior/posterior axis specification
GO:0008069 P dorsal/ventral axis specification, ovarian follicular epithelium
GO:0008298 P intracellular mRNA localization
GO:0009953 P dorsal/ventral pattern formation
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0017148 P negative regulation of translation
GO:0019094 P pole plasm mRNA localization
GO:0030529 C ribonucleoprotein complex
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0033119 P negative regulation of RNA splicing
GO:0035062 C omega speckle
GO:0045451 P pole plasm oskar mRNA localization
GO:0048477 P oogenesis
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
144 O_BomoIG10012_5prime_partial:A_BomoIG_DN33712_c4_g3_i16
151bp
145 O_BomoIG100130_complete:A_BomoIG_DN31567_c2_g2_i2
147bp
146 O_BomoIG100131_complete:A_BomoIG_DN31567_c2_g2_i3
225bp
 squid_protein_homologue_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0000785 C chromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0007293 P germarium-derived egg chamber formation
GO:0007297 P ovarian follicle cell migration
GO:0007314 P oocyte anterior/posterior axis specification
GO:0008069 P dorsal/ventral axis specification, ovarian follicular epithelium
GO:0008298 P intracellular mRNA localization
GO:0009953 P dorsal/ventral pattern formation
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0017148 P negative regulation of translation
GO:0019094 P pole plasm mRNA localization
GO:0030529 C ribonucleoprotein complex
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0033119 P negative regulation of RNA splicing
GO:0035062 C omega speckle
GO:0045451 P pole plasm oskar mRNA localization
GO:0048477 P oogenesis
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
147 O_BomoIG100132_complete:A_BomoIG_DN31567_c2_g2_i3
147bp
148 O_BomoIG100133_complete:A_BomoIG_DN31567_c2_g2_i4
188bp
 squid_protein_homologue_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0000785 C chromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0007293 P germarium-derived egg chamber formation
GO:0007297 P ovarian follicle cell migration
GO:0007314 P oocyte anterior/posterior axis specification
GO:0008069 P dorsal/ventral axis specification, ovarian follicular epithelium
GO:0008298 P intracellular mRNA localization
GO:0009953 P dorsal/ventral pattern formation
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0017148 P negative regulation of translation
GO:0019094 P pole plasm mRNA localization
GO:0030529 C ribonucleoprotein complex
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0033119 P negative regulation of RNA splicing
GO:0035062 C omega speckle
GO:0045451 P pole plasm oskar mRNA localization
GO:0048477 P oogenesis
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
149 O_BomoIG100134_complete:A_BomoIG_DN31567_c2_g2_i4
147bp
150 O_BomoIG100135_complete:A_BomoIG_DN31567_c2_g2_i4
134bp
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