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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11851 O_BomoIG16904_complete:A_BomoIG_DN32672_c0_g1_i2
379bp
 calnexin_[Bombyx_mori]
GO:0001948 F protein binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005790 C smooth endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0005829 C cytosol
GO:0005840 C ribosome
GO:0006457 P protein folding
GO:0007568 P aging
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
GO:0030424 C axon
GO:0032839 C dendrite cytoplasm
GO:0034185 F apolipoprotein binding
GO:0035255 F ionotropic glutamate receptor binding
GO:0042470 C melanosome
GO:0043025 C neuronal cell body
GO:0043197 C dendritic spine
GO:0043209 C myelin sheath
GO:0043234 C protein-containing complex
GO:0044233 C mitochondria-associated endoplasmic reticulum membrane
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048488 P synaptic vesicle endocytosis
GO:0051082 F unfolded protein binding
GO:0061077 P chaperone-mediated protein folding
GO:0070062 C extracellular exosome
GO:0072583 P clathrin-dependent endocytosis
11852 O_BomoIG16905_complete:A_BomoIG_DN32672_c0_g6_i1
356bp
 uncharacterized_protein_LOC101741471_[Bombyx_mori]
GO:0001503 P ossification
GO:0002080 C acrosomal membrane
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005637 C nuclear inner membrane
GO:0005639 C integral component of nuclear inner membrane
GO:0005737 C cytoplasm
GO:0006998 P nuclear envelope organization
GO:0007129 P homologous chromosome pairing at meiosis
GO:0009612 P response to mechanical stimulus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0043231 C intracellular membrane-bounded organelle
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
11853 O_BomoIG16906_complete:A_BomoIG_DN32672_c0_g6_i1
140bp
11854 O_BomoIG16907_5prime_partial:A_BomoIG_DN32672_c0_g6_i2
408bp
 uncharacterized_protein_LOC101741471_[Bombyx_mori]
GO:0001503 P ossification
GO:0002080 C acrosomal membrane
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005637 C nuclear inner membrane
GO:0005639 C integral component of nuclear inner membrane
GO:0005737 C cytoplasm
GO:0006998 P nuclear envelope organization
GO:0007129 P homologous chromosome pairing at meiosis
GO:0009612 P response to mechanical stimulus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0043231 C intracellular membrane-bounded organelle
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
11855 O_BomoIG16908_complete:A_BomoIG_DN32672_c0_g6_i2
140bp
11856 O_BomoIG16909_5prime_partial:A_BomoIG_DN32672_c0_g6_i3
408bp
 uncharacterized_protein_LOC101741471_[Bombyx_mori]
GO:0001503 P ossification
GO:0002080 C acrosomal membrane
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005637 C nuclear inner membrane
GO:0005639 C integral component of nuclear inner membrane
GO:0005737 C cytoplasm
GO:0006998 P nuclear envelope organization
GO:0007129 P homologous chromosome pairing at meiosis
GO:0009612 P response to mechanical stimulus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0043231 C intracellular membrane-bounded organelle
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
11857 O_BomoIG1690_complete:A_BomoIG_DN30269_c4_g2_i17
496bp
 dynamin-1-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000266 P mitochondrial fission
GO:0001836 P release of cytochrome c from mitochondria
GO:0003374 P dynamin family protein polymerization involved in mitochondrial fission
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0005903 C brush border
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0010821 P regulation of mitochondrion organization
GO:0012501 P programmed cell death
GO:0012505 C endomembrane system
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016559 P peroxisome fission
GO:0016787 F hydrolase activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0032459 P regulation of protein oligomerization
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043653 P mitochondrial fragmentation involved in apoptotic process
GO:0045202 C synapse
GO:0048471 C perinuclear region of cytoplasm
GO:0050714 P positive regulation of protein secretion
GO:0051289 P protein homotetramerization
GO:0060047 P heart contraction
GO:0061025 P membrane fusion
GO:0070266 P necroptotic process
GO:0070584 P mitochondrion morphogenesis
GO:0070585 P protein localization to mitochondrion
GO:0090141 P positive regulation of mitochondrial fission
GO:0090149 P mitochondrial membrane fission
GO:0090200 P positive regulation of release of cytochrome c from mitochondria
GO:1900063 P regulation of peroxisome organization
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903578 P regulation of ATP metabolic process
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
11858 O_BomoIG16910_complete:A_BomoIG_DN32672_c0_g6_i3
140bp
11859 O_BomoIG16911_complete:A_BomoIG_DN32672_c0_g6_i4
356bp
 uncharacterized_protein_LOC101741471_[Bombyx_mori]
GO:0001503 P ossification
GO:0002080 C acrosomal membrane
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005637 C nuclear inner membrane
GO:0005639 C integral component of nuclear inner membrane
GO:0005737 C cytoplasm
GO:0006998 P nuclear envelope organization
GO:0007129 P homologous chromosome pairing at meiosis
GO:0009612 P response to mechanical stimulus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0043231 C intracellular membrane-bounded organelle
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
11860 O_BomoIG16912_complete:A_BomoIG_DN32672_c0_g6_i4
140bp
11861 O_BomoIG16913_complete:A_BomoIG_DN32672_c0_g6_i5
356bp
 uncharacterized_protein_LOC101741471_[Bombyx_mori]
GO:0001503 P ossification
GO:0002080 C acrosomal membrane
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005637 C nuclear inner membrane
GO:0005639 C integral component of nuclear inner membrane
GO:0005737 C cytoplasm
GO:0006998 P nuclear envelope organization
GO:0007129 P homologous chromosome pairing at meiosis
GO:0009612 P response to mechanical stimulus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0043231 C intracellular membrane-bounded organelle
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
11862 O_BomoIG16914_complete:A_BomoIG_DN32672_c0_g6_i5
140bp
11863 O_BomoIG16915_complete:A_BomoIG_DN32672_c0_g1_i4
337bp
 calnexin_[Bombyx_mori]
GO:0001948 F protein binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005790 C smooth endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0005829 C cytosol
GO:0005840 C ribosome
GO:0006457 P protein folding
GO:0007568 P aging
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
GO:0030424 C axon
GO:0032839 C dendrite cytoplasm
GO:0034185 F apolipoprotein binding
GO:0035255 F ionotropic glutamate receptor binding
GO:0042470 C melanosome
GO:0043025 C neuronal cell body
GO:0043197 C dendritic spine
GO:0043209 C myelin sheath
GO:0043234 C protein-containing complex
GO:0044233 C mitochondria-associated endoplasmic reticulum membrane
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048488 P synaptic vesicle endocytosis
GO:0051082 F unfolded protein binding
GO:0061077 P chaperone-mediated protein folding
GO:0070062 C extracellular exosome
GO:0072583 P clathrin-dependent endocytosis
11864 O_BomoIG16916_5prime_partial:A_BomoIG_DN32672_c0_g1_i4
132bp
11865 O_BomoIG16917_5prime_partial:A_BomoIG_DN32672_c0_g4_i2
229bp
 disks_large_homolog_5_isoform_X2_[Bombyx_mori]
11866 O_BomoIG16918_5prime_partial:A_BomoIG_DN32672_c0_g6_i6
319bp
 uncharacterized_protein_LOC101741471_[Bombyx_mori]
GO:0001503 P ossification
GO:0002080 C acrosomal membrane
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005637 C nuclear inner membrane
GO:0005639 C integral component of nuclear inner membrane
GO:0005737 C cytoplasm
GO:0006998 P nuclear envelope organization
GO:0007129 P homologous chromosome pairing at meiosis
GO:0009612 P response to mechanical stimulus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0043231 C intracellular membrane-bounded organelle
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
11867 O_BomoIG16919_5prime_partial:A_BomoIG_DN32672_c0_g6_i7
408bp
 uncharacterized_protein_LOC101741471_[Bombyx_mori]
GO:0001503 P ossification
GO:0002080 C acrosomal membrane
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005637 C nuclear inner membrane
GO:0005639 C integral component of nuclear inner membrane
GO:0005737 C cytoplasm
GO:0006998 P nuclear envelope organization
GO:0007129 P homologous chromosome pairing at meiosis
GO:0009612 P response to mechanical stimulus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0043231 C intracellular membrane-bounded organelle
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
11868 O_BomoIG1691_complete:A_BomoIG_DN30269_c4_g2_i17
101bp
 hypothetical_protein_AX774_g4397_[Zancudomyces_culisetae]
11869 O_BomoIG16920_complete:A_BomoIG_DN32672_c0_g6_i7
140bp
11870 O_BomoIG16921_complete:A_BomoIG_DN32672_c0_g1_i6
576bp
 calnexin_[Bombyx_mori]
GO:0001948 F protein binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005790 C smooth endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0005829 C cytosol
GO:0005840 C ribosome
GO:0006457 P protein folding
GO:0007568 P aging
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
GO:0030424 C axon
GO:0032839 C dendrite cytoplasm
GO:0034185 F apolipoprotein binding
GO:0035255 F ionotropic glutamate receptor binding
GO:0042470 C melanosome
GO:0043025 C neuronal cell body
GO:0043197 C dendritic spine
GO:0043209 C myelin sheath
GO:0043234 C protein-containing complex
GO:0044233 C mitochondria-associated endoplasmic reticulum membrane
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048488 P synaptic vesicle endocytosis
GO:0051082 F unfolded protein binding
GO:0061077 P chaperone-mediated protein folding
GO:0070062 C extracellular exosome
GO:0072583 P clathrin-dependent endocytosis
11871 O_BomoIG16922_complete:A_BomoIG_DN32672_c0_g1_i6
263bp
 hypothetical_protein_F751_5646_[Auxenochlorella_protothecoides]
11872 O_BomoIG16923_complete:A_BomoIG_DN32650_c0_g1_i2
123bp
 RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Danaus_plexippus_plexippus]
11873 O_BomoIG16924_internal:A_BomoIG_DN32650_c0_g1_i3
168bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X4_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
11874 O_BomoIG16925_complete:A_BomoIG_DN32650_c0_g1_i4
127bp
 RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Danaus_plexippus_plexippus]
11875 O_BomoIG16926_3prime_partial:A_BomoIG_DN32650_c0_g1_i5
228bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X5_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
11876 O_BomoIG16927_complete:A_BomoIG_DN32650_c0_g1_i5
127bp
 RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Danaus_plexippus_plexippus]
11877 O_BomoIG16928_internal:A_BomoIG_DN32650_c0_g1_i6
131bp
 putative_pol-like_protein,_partial_[Operophtera_brumata]
11878 O_BomoIG16929_5prime_partial:A_BomoIG_DN32650_c0_g1_i7
232bp
 RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Danaus_plexippus_plexippus]
11879 O_BomoIG1692_3prime_partial:A_BomoIG_DN30246_c6_g5_i1
238bp
 HMG_box-containing_protein_4_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0008333 P endosome to lysosome transport
GO:0016055 P Wnt signaling pathway
GO:0016589 C NURF complex
GO:0030178 P negative regulation of Wnt signaling pathway
11880 O_BomoIG16930_internal:A_BomoIG_DN32650_c0_g1_i8
445bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X5_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
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