SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/104180
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11461 O_BomoIG16553_complete:A_BomoIG_DN32682_c1_g1_i8
152bp
11462 O_BomoIG16554_complete:A_BomoIG_DN32682_c1_g2_i2
158bp
 eukaryotic_translation_initiation_factor_3_subunit_H_[Bombyx_mori]
GO:0001731 P formation of translation preinitiation complex
GO:0003743 F translation initiation factor activity
GO:0005737 C cytoplasm
GO:0005852 C eukaryotic translation initiation factor 3 complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0016282 C eukaryotic 43S preinitiation complex
GO:0033290 C eukaryotic 48S preinitiation complex
11463 O_BomoIG16555_complete:A_BomoIG_DN32682_c1_g1_i9
1007bp
 rho_guanine_nucleotide_exchange_factor_17_isoform_X3_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005829 C cytosol
GO:0030036 P actin cytoskeleton organization
GO:0035023 P regulation of Rho protein signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
11464 O_BomoIG16556_complete:A_BomoIG_DN32682_c1_g1_i9
152bp
11465 O_BomoIG16557_complete:A_BomoIG_DN32682_c1_g1_i10
1204bp
 rho_guanine_nucleotide_exchange_factor_17_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005829 C cytosol
GO:0030036 P actin cytoskeleton organization
GO:0035023 P regulation of Rho protein signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
11466 O_BomoIG16558_3prime_partial:A_BomoIG_DN32682_c1_g1_i10
165bp
11467 O_BomoIG16559_complete:A_BomoIG_DN32682_c1_g1_i10
152bp
11468 O_BomoIG1655_complete:A_BomoIG_DN30224_c5_g4_i6
159bp
 hypothetical_protein_THAOC_14365,_partial_[Thalassiosira_oceanica]
11469 O_BomoIG16560_complete:A_BomoIG_DN32682_c1_g1_i10
118bp
11470 O_BomoIG16561_complete:A_BomoIG_DN32682_c1_g1_i11
696bp
 rho_guanine_nucleotide_exchange_factor_17_isoform_X3_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0030036 P actin cytoskeleton organization
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
11471 O_BomoIG16562_complete:A_BomoIG_DN32682_c1_g1_i11
152bp
11472 O_BomoIG16563_complete:A_BomoIG_DN32682_c1_g1_i12
1170bp
 rho_guanine_nucleotide_exchange_factor_17_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0030036 P actin cytoskeleton organization
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
11473 O_BomoIG16564_3prime_partial:A_BomoIG_DN32682_c1_g1_i12
165bp
11474 O_BomoIG16565_complete:A_BomoIG_DN32682_c1_g1_i12
152bp
11475 O_BomoIG16566_complete:A_BomoIG_DN32682_c1_g1_i12
118bp
11476 O_BomoIG16567_complete:A_BomoIG_DN32682_c1_g1_i14
1008bp
 rho_guanine_nucleotide_exchange_factor_17_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005829 C cytosol
GO:0030036 P actin cytoskeleton organization
GO:0035023 P regulation of Rho protein signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
11477 O_BomoIG16568_3prime_partial:A_BomoIG_DN32682_c1_g1_i14
165bp
11478 O_BomoIG16569_complete:A_BomoIG_DN32682_c1_g1_i14
152bp
11479 O_BomoIG1656_complete:A_BomoIG_DN30269_c4_g2_i1
490bp
 dynamin-1-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000266 P mitochondrial fission
GO:0001836 P release of cytochrome c from mitochondria
GO:0003374 P dynamin family protein polymerization involved in mitochondrial fission
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0005903 C brush border
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0010821 P regulation of mitochondrion organization
GO:0012501 P programmed cell death
GO:0012505 C endomembrane system
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016559 P peroxisome fission
GO:0016787 F hydrolase activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0032459 P regulation of protein oligomerization
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043653 P mitochondrial fragmentation involved in apoptotic process
GO:0045202 C synapse
GO:0048471 C perinuclear region of cytoplasm
GO:0050714 P positive regulation of protein secretion
GO:0051289 P protein homotetramerization
GO:0060047 P heart contraction
GO:0061025 P membrane fusion
GO:0070266 P necroptotic process
GO:0070584 P mitochondrion morphogenesis
GO:0070585 P protein localization to mitochondrion
GO:0090141 P positive regulation of mitochondrial fission
GO:0090149 P mitochondrial membrane fission
GO:0090200 P positive regulation of release of cytochrome c from mitochondria
GO:1900063 P regulation of peroxisome organization
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903578 P regulation of ATP metabolic process
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
11480 O_BomoIG16570_complete:A_BomoIG_DN32682_c1_g1_i14
118bp
11481 O_BomoIG16571_complete:A_BomoIG_DN32682_c1_g1_i16
980bp
 rho_guanine_nucleotide_exchange_factor_17_isoform_X3_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0030036 P actin cytoskeleton organization
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
11482 O_BomoIG16572_complete:A_BomoIG_DN32682_c1_g1_i16
152bp
11483 O_BomoIG16573_complete:A_BomoIG_DN32682_c1_g1_i17
1014bp
 rho_guanine_nucleotide_exchange_factor_17_isoform_X3_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005829 C cytosol
GO:0030036 P actin cytoskeleton organization
GO:0035023 P regulation of Rho protein signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
11484 O_BomoIG16574_complete:A_BomoIG_DN32682_c1_g1_i17
152bp
11485 O_BomoIG16575_complete:A_BomoIG_DN32682_c1_g1_i18
546bp
 rho_guanine_nucleotide_exchange_factor_17_isoform_X3_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0030036 P actin cytoskeleton organization
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
11486 O_BomoIG16576_complete:A_BomoIG_DN32682_c1_g1_i18
152bp
11487 O_BomoIG16577_complete:A_BomoIG_DN32682_c1_g1_i19
1320bp
 rho_guanine_nucleotide_exchange_factor_17_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0030036 P actin cytoskeleton organization
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
11488 O_BomoIG16578_3prime_partial:A_BomoIG_DN32682_c1_g1_i19
165bp
11489 O_BomoIG16579_complete:A_BomoIG_DN32682_c1_g1_i19
152bp
11490 O_BomoIG1657_complete:A_BomoIG_DN30269_c4_g2_i1
101bp
 hypothetical_protein_AX774_g4397_[Zancudomyces_culisetae]
previous next from show/104180

- SilkBase 1999-2023 -