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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11311 O_BomoIG16418_3prime_partial:A_BomoIG_DN32670_c3_g11_i2
102bp
11312 O_BomoIG16419_3prime_partial:A_BomoIG_DN32670_c3_g1_i5
179bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_CG7065_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
11313 O_BomoIG1641_internal:A_BomoIG_DN30224_c5_g10_i1
124bp
 WD_repeat-containing_protein_3-like_[Bombyx_mori]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0031965 C nuclear membrane
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
GO:0044822 F RNA binding
11314 O_BomoIG16420_complete:A_BomoIG_DN32670_c3_g1_i5
163bp
11315 O_BomoIG16421_complete:A_BomoIG_DN32670_c3_g1_i5
141bp
11316 O_BomoIG16422_3prime_partial:A_BomoIG_DN32670_c3_g1_i6
651bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_CG7065_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
11317 O_BomoIG16423_complete:A_BomoIG_DN32670_c3_g1_i6
159bp
11318 O_BomoIG16424_complete:A_BomoIG_DN32670_c3_g1_i6
141bp
11319 O_BomoIG16425_3prime_partial:A_BomoIG_DN32670_c3_g1_i7
636bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_CG7065_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
11320 O_BomoIG16426_complete:A_BomoIG_DN32670_c3_g1_i7
141bp
11321 O_BomoIG16427_complete:A_BomoIG_DN32670_c3_g1_i7
136bp
11322 O_BomoIG16428_complete:A_BomoIG_DN32670_c3_g11_i3
147bp
11323 O_BomoIG16429_3prime_partial:A_BomoIG_DN32670_c3_g1_i8
728bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_CG7065_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
11324 O_BomoIG1642_complete:A_BomoIG_DN30224_c5_g3_i4
125bp
 phosphoglycerate_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004618 F phosphoglycerate kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006096 P glycolytic process
GO:0007268 P chemical synaptic transmission
GO:0007520 P myoblast fusion
GO:0007525 P somatic muscle development
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030018 C Z disc
GO:0031430 C M band
GO:0046716 P muscle cell cellular homeostasis
11325 O_BomoIG16430_complete:A_BomoIG_DN32670_c3_g1_i8
159bp
11326 O_BomoIG16431_complete:A_BomoIG_DN32670_c3_g1_i8
141bp
11327 O_BomoIG16432_complete:A_BomoIG_DN32670_c3_g1_i8
103bp
11328 O_BomoIG16433_5prime_partial:A_BomoIG_DN32670_c3_g11_i4
169bp
 crossover_junction_endonuclease_MUS81_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006259 P DNA metabolic process
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
11329 O_BomoIG16434_complete:A_BomoIG_DN32670_c3_g1_i9
316bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_CG7065_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
11330 O_BomoIG16435_complete:A_BomoIG_DN32670_c3_g1_i9
159bp
11331 O_BomoIG16436_complete:A_BomoIG_DN32670_c3_g1_i9
149bp
11332 O_BomoIG16437_3prime_partial:A_BomoIG_DN32670_c3_g1_i10
782bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_CG7065_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
11333 O_BomoIG16438_complete:A_BomoIG_DN32670_c3_g1_i10
169bp
11334 O_BomoIG16439_complete:A_BomoIG_DN32670_c3_g1_i10
159bp
11335 O_BomoIG1643_complete:A_BomoIG_DN30224_c5_g3_i5
416bp
 phosphoglycerate_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004618 F phosphoglycerate kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006096 P glycolytic process
GO:0007268 P chemical synaptic transmission
GO:0007520 P myoblast fusion
GO:0007525 P somatic muscle development
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030018 C Z disc
GO:0031430 C M band
GO:0046716 P muscle cell cellular homeostasis
11336 O_BomoIG16440_complete:A_BomoIG_DN32670_c3_g1_i10
141bp
11337 O_BomoIG16441_complete:A_BomoIG_DN32670_c3_g11_i5
127bp
11338 O_BomoIG16442_5prime_partial:A_BomoIG_DN32670_c3_g11_i5
119bp
 porimin_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007517 P muscle organ development
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11339 O_BomoIG16443_3prime_partial:A_BomoIG_DN32670_c3_g11_i5
102bp
11340 O_BomoIG16444_complete:A_BomoIG_DN32670_c3_g11_i6
791bp
 crossover_junction_endonuclease_MUS81_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006259 P DNA metabolic process
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
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